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2023

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Full-Text Articles in Physical Sciences and Mathematics

Physics Ii, Kalani Hettiarachchilage Dec 2023

Physics Ii, Kalani Hettiarachchilage

Open Educational Resources

Physics II, class code PHY 156 at College of Staten Island is the second part of two two-semester algebra-based introductory physics courses. This course overlaps of the following topics laws of electricity, magnetism, optics, and modern physics. The important laws of physics in these areas and problem-solving are emphasized. Problem solving is an integral part of the course, all contents are designed to think critically, analytically, and logically. Conceptual understanding is reinforced using interactive computer-based techniques, demonstrations, problem-solving strategies, and laboratory experiences. In this document, all the class materials including lectures, worksheets, homework, group work assignments, quizzes, and conceptual Slido …


Creative Physics Syllabus For Online Class, Kalani Hettiarachchilage Dec 2023

Creative Physics Syllabus For Online Class, Kalani Hettiarachchilage

Open Educational Resources

Creative Physics syllabus for all information and guidelines will be a big help for students to know about the class structure, expectations, submission, personalized class materials, class ethics, and requirements in one place. This detailed syllabus will be a very effective way of expressing the information to the class. Creating a detailed syllabus and engaging activity of in the learning management system such as syllabus review activity will help students to navigate through important items on the syllabus.


Physics I, Kalani Hettiarachchilage Dec 2023

Physics I, Kalani Hettiarachchilage

Open Educational Resources

Physics I, class code PHY 116 at College of Staten Island is the first part of a two-semester algebra-based introductory physics course. This course overlaps many topics in the laws of classical mechanics, fluid dynamics, thermodynamics, wave motion, and sound. The important laws of physics in these areas and problem-solving are emphasized. Problem solving is an integral part of the course, all contents are designed to think critically, analytically, and logically. Conceptual understanding is reinforced using interactive computer-based techniques, demonstrations, problem-solving strategies, and laboratory experiences. In this document, all the class materials including lectures, worksheets, homework and group work assignments, …


Introduction To Physics, Kalani Hetti Dec 2023

Introduction To Physics, Kalani Hetti

Open Educational Resources

Introduction to physics, class code PHY 114 at college of Staten Island covers general physics concepts by using very simple algebraic calculations. Topics may include scientific measurements, significant figures, estimation, units, linear and rotational motion, vectors, forces, energy, momentum, collision, impulse, projectile motion, circular motion, thermodynamics, oscillating waves, electricity and magnetism, properties of lights, reflection, refraction, atomic nuclei, and radioactivity. This course is designed to teach general concepts and laws of physics to everyday life enforcing student’s critical thinking, logical patterns, organization, and everyday life applications. In this document, all the class materials including lectures, worksheets, homework assignments, quizzes, and …


Unmasking Shadows: Unraveling Crime Patterns In Nyc's Boroughs, Jack Hachicho, Muhammad Hassan Butt Dec 2023

Unmasking Shadows: Unraveling Crime Patterns In Nyc's Boroughs, Jack Hachicho, Muhammad Hassan Butt

Publications and Research

New York City's crime dynamics have been on the rise for decades. Brooklyn and The Bronx have been disproportionately affected. This research aims to understand the crime landscape in these boroughs to formulate effective policies. Using crime data from official sources, statistical analyses, and data visualizations, the study identifies patterns and trends. The data encompasses over 400,000 reported incidents collected over the past 10 years, meticulously categorized by borough, crime type, and demographic information. Brooklyn has the highest overall crime rate, followed by The Bronx. Most shooting victims are Black. This highlights the need for holistic community programs to address …


Μakka: Mutation Testing For Actor Concurrency In Akka Using Real-World Bugs, Mohsen Moradi Moghadam, Mehdi Bagherzadeh, Raffi Takvor Khatchadourian Ph,D,, Hamid Bagheri Dec 2023

Μakka: Mutation Testing For Actor Concurrency In Akka Using Real-World Bugs, Mohsen Moradi Moghadam, Mehdi Bagherzadeh, Raffi Takvor Khatchadourian Ph,D,, Hamid Bagheri

Publications and Research

Actor concurrency is becoming increasingly important in the real-world and mission-critical software. This requires these applications to be free from actor bugs, that occur in the real world, and have tests that are effective in finding these bugs. Mutation testing is a well-established technique that transforms an application to induce its likely bugs and evaluate the effectiveness of its tests in finding these bugs. Mutation testing is available for a broad spectrum of applications and their bugs, ranging from web to mobile to machine learning, and is used at scale in companies like Google and Facebook. However, there still is …


Are The Cans In The Store “Volume Optimized”? [Mathematics], Bukurie Gjoci Oct 2023

Are The Cans In The Store “Volume Optimized”? [Mathematics], Bukurie Gjoci

Open Educational Resources

This is one of LaGuardia’s Project Connexion STEM Team’s experiential learning activities. Project Connexion's purpose is to promote creative thinking on how to engage students in the classroom. As part of this, the STEM team developed Experiential/co-curricular activities that demonstrated to students how their work in class connects to the world around them. These activities were embedded into the syllabus to ensure the participation of all students. Each professor designed a Co-curricular activity for their courses, ensuring that the Co-curricular activity directly linked course material to the outside world.

This Calculus I Experiential Learning Project aligns with one of the …


Math 115: College Algebra For Pre-Calculus, Seth Lehman Oct 2023

Math 115: College Algebra For Pre-Calculus, Seth Lehman

Open Educational Resources

OER course syllabus for Math 115, College Algebra, at Queens College


Towards Safe Automated Refactoring Of Imperative Deep Learning Programs To Graph Execution, Raffi Takvor Khatchadourian Ph.D., Tatiana Castro Vélez, Mehdi Bagherzadeh, Nan Jia, Anita Raja Sep 2023

Towards Safe Automated Refactoring Of Imperative Deep Learning Programs To Graph Execution, Raffi Takvor Khatchadourian Ph.D., Tatiana Castro Vélez, Mehdi Bagherzadeh, Nan Jia, Anita Raja

Publications and Research

Efficiency is essential to support responsiveness w.r.t. ever-growing datasets, especially for Deep Learning (DL) systems. DL frameworks have traditionally embraced deferred execution-style DL code—supporting symbolic, graph-based Deep Neural Network (DNN) computation. While scalable, such development is error-prone, non-intuitive, and difficult to debug. Consequently, more natural, imperative DL frameworks encouraging eager execution have emerged at the expense of run-time performance. Though hybrid approaches aim for the “best of both worlds,” using them effectively requires subtle considerations to make code amenable to safe, accurate, and efficient graph execution. We present our ongoing work on automated refactoring that assists developers in specifying whether …


Towards Safe Automated Refactoring Of Imperative Deep Learning Programs To Graph Execution, Raffi T. Khatchadourian Ph,D,, Tatiana Castro Vélez, Mehdi Bagherzadeh, Nan Jia, Anita Raja Sep 2023

Towards Safe Automated Refactoring Of Imperative Deep Learning Programs To Graph Execution, Raffi T. Khatchadourian Ph,D,, Tatiana Castro Vélez, Mehdi Bagherzadeh, Nan Jia, Anita Raja

Publications and Research

Efficiency is essential to support responsiveness w.r.t. ever-growing datasets, especially for Deep Learning (DL) systems. DL frameworks have traditionally embraced deferred execution-style DL code—supporting symbolic, graph-based Deep Neural Network (DNN) computation. While scalable, such development is error-prone, non-intuitive, and difficult to debug. Consequently, more natural, imperative DL frameworks encouraging eager execution have emerged at the expense of run-time performance. Though hybrid approaches aim for the "best of both worlds," using them effectively requires subtle considerations to make code amenable to safe, accurate, and efficient graph execution. We present our ongoing work on automated refactoring that assists developers in specifying whether …


Applying Structural Equation Modeling To Better Understand The Relationship Between Stressors, Social Support And Wellbeing In The Lives Of Spouse Dementia Caregivers, Craig Holden Sep 2023

Applying Structural Equation Modeling To Better Understand The Relationship Between Stressors, Social Support And Wellbeing In The Lives Of Spouse Dementia Caregivers, Craig Holden

Dissertations, Theses, and Capstone Projects

Applying Structural Equation Modeling to Better Understand the Relationship Between Stressors, Social Support and Wellbeing in the Lives of Spouse Dementia Caregivers considers the utility of Pearlin et al.’s (1990) stress process model in understanding the needs of spouse caregivers. Data were drawn from eight biennial waves of the University of Michigan Health and Retirement Study (HRS) and analyzed using structural equation modeling. The final study sample comprised 774 spouses, average age 73, who were categorized based on Alzheimer’s Disease and Related Dementia (ADRD) and non-ADRD caregiver status. Results showed that for the study sample as a whole, social support …


Nonlinear Processes In Room Temperature Exciton-Polaritons, Prathmesh Deshmukh Sep 2023

Nonlinear Processes In Room Temperature Exciton-Polaritons, Prathmesh Deshmukh

Dissertations, Theses, and Capstone Projects

Strong light-matter coupling in solid state systems is an intriguing process that allows one to exploit the advantages of both light and matter. In this context, microcavities have become essential platforms for studying the strong coupling regime, where hybrid light-matter states known as exciton-polaritons form, leading to enhanced light matter interaction, modified material properties, and novel quantum phenomena. In this thesis, we explore the phenomenology of exciton-polaritons in strained TMD microcavities, 2D perovskites, fluorescent proteins and organic dyes encompassing thermalization, polariton lasing, and the observation of nonlinear effects.

Transition metal dichalcogenides (TMDs) have emerged as a remarkable class of two- …


Rotation Period Distributions And Light Curve Morphologies Of Low Mass Stars And Young Associations, Mark Popinchalk Sep 2023

Rotation Period Distributions And Light Curve Morphologies Of Low Mass Stars And Young Associations, Mark Popinchalk

Dissertations, Theses, and Capstone Projects

This dissertation is centered around the rotation periods of low-mass stars and association of young stars. Rotation periods are a link to the age of the star, as they lose angular momentum over time. To understand how this angular momentum evolves requires understanding the rotation period distributions of a range of stellar types and ages. Traditionally, M dwarf stars and young stars were challenging to describe due to their intrinsic faintness and dispersed sky positions respectively. I approached this subject from several directions.


Uncertainties In Retrieval Of Remote Sensing Reflectance From Ocean Color Satellite Observations, Eder I. Herrera Estrella Sep 2023

Uncertainties In Retrieval Of Remote Sensing Reflectance From Ocean Color Satellite Observations, Eder I. Herrera Estrella

Dissertations, Theses, and Capstone Projects

Ocean Color radiometry uses remote sensing to interpret ocean dynamics by retrieving remote sensing reflectance (𝑅𝑟𝑠) from satellite imagery at different scales and over different time periods. 𝑅𝑟𝑠 spectrum characterizes the ocean color that we observe, and from which we can discern concentrations of chlorophyll, organic and inorganic particles, and carbon fluxes in the ocean and atmosphere. 𝑅𝑟𝑠 is derived from the total radiance at the top of the atmosphere (TOA). However, it only represents up to ten percent of the total signal. Hence, the retrieval of 𝑅𝑟𝑠 from the total radiance at TOA involves the application of atmospheric correction …


Disordered Protein Aggregates Are Linked To Changes In The Histone Post-Translational Modification Landscape In Disease And Non-Disease Models, Samantha Cobos Sep 2023

Disordered Protein Aggregates Are Linked To Changes In The Histone Post-Translational Modification Landscape In Disease And Non-Disease Models, Samantha Cobos

Dissertations, Theses, and Capstone Projects

Proper protein folding is a delicate balance that is crucial for normal biological function. In mammals, protein misfolding and aggregation leads to loss of function of the original protein while in many cases being associated with neurodegenerative diseases, eventually leading to death of the organism. In yeast however, the aggregated prion state is associated with positive cellular outcomes, and cells can switch between the [PRION+] and [prion-] states. Understanding the factors that lead to changes in prion state conformation in yeast could lead to novel insight into the conditions controlling misfolding by neurodegenerative proteinopathies. We believe that by studying the …


Soundness And Completeness Results For The Logic Of Evidence Aggregation And Its Probability Semantics, Eoin Moore Sep 2023

Soundness And Completeness Results For The Logic Of Evidence Aggregation And Its Probability Semantics, Eoin Moore

Dissertations, Theses, and Capstone Projects

The Logic of Evidence Aggregation (LEA), introduced in 2020, offers a solution to the problem of evidence aggregation, but LEA is not complete with respect to the intended probability semantics. This left open the tasks to find sound and complete semantics for LEA and a proper axiomatization for probability semantics. In this thesis we do both. We also develop the proof theory for some LEA-related logics and show surprising connections between LEA-related logics and Lax Logic.


Kinetics Of Photochemical And Mechanochemical Organic Reactions On Surface, Yerzhan Zholdassov Sep 2023

Kinetics Of Photochemical And Mechanochemical Organic Reactions On Surface, Yerzhan Zholdassov

Dissertations, Theses, and Capstone Projects

Solvents used in traditional chemical processes account for a large percentage of reaction mass and waste and can pose significant environmental and health risks. The environmentally friendly nature of mechanochemistry, in addition to other benefits, makes it a promising approach for sustainable chemistry over traditional solvent-based methods. However, it is still not a widely adopted method for performing chemical reactions on an industrial scale. This is partially due to the significant challenge associated with understanding the reaction kinetics under mechanochemical conditions. Many variations of scanning probe lithography (SPL) techniques are able to manipulate the organic molecules with precise control over …


Quantifying Temperature-, Pressure-, And Nuclear Quantum Effects On Hydrophobic And Hydrophilic Water-Mediated Interactions, Justin T. Engstler Sep 2023

Quantifying Temperature-, Pressure-, And Nuclear Quantum Effects On Hydrophobic And Hydrophilic Water-Mediated Interactions, Justin T. Engstler

Dissertations, Theses, and Capstone Projects

Water-mediated interactions (WMIs) are responsible for diverse processes in aqueous solutions, including protein folding and nanoparticle aggregation. WMI may be affected by changes in temperature and pressure, and hence, they can alter chemical/physical processes that occur in aqueous environments. Traditionally, attention has been focused on hydrophobic interactions while, in comparison, the role of hydrophilic and hybrid (hydrophobic–hydrophilic) interactions have been mostly overlooked. Here, we study the role of T and P on the WMI between nanoscale (i) hydrophobic–hydrophobic, (ii) hydrophilic–hydrophilic, and (iii) hydrophilic–hydrophobic pairs of (hydroxylated/non-hydroxylated) graphene-based surfaces. We find that hydrophobic, hydrophilic, and hybrid interactions are all sensitive to …


Optimization And Application Of Graph Neural Networks, Shuo Zhang Sep 2023

Optimization And Application Of Graph Neural Networks, Shuo Zhang

Dissertations, Theses, and Capstone Projects

Graph Neural Networks (GNNs) are widely recognized for their potential in learning from graph-structured data and solving complex problems. However, optimal performance and applicability of GNNs have been an open-ended challenge. This dissertation presents a series of substantial advances addressing this problem. First, we investigate attention-based GNNs, revealing a critical shortcoming: their ignorance of cardinality information that impacts their discriminative power. To rectify this, we propose Cardinality Preserved Attention (CPA) models that can be applied to any attention-based GNNs, which exhibit a marked improvement in performance. Next, we introduce the Directional Node Pair (DNP) descriptor and the Robust Molecular Graph …


Centrality Effects On Heavy-Flavor Quark Production And Invariant Yield In Phenix Proton–Gold Collisions At Center-Of-Mass Energy 200 Gev, And Assembly, Testing, Calibration, And Installation Of The Sphenix Hadronic Calorimeters, Daniel Richford Sep 2023

Centrality Effects On Heavy-Flavor Quark Production And Invariant Yield In Phenix Proton–Gold Collisions At Center-Of-Mass Energy 200 Gev, And Assembly, Testing, Calibration, And Installation Of The Sphenix Hadronic Calorimeters, Daniel Richford

Dissertations, Theses, and Capstone Projects

Hadrons created in heavy-ion collisions interact with the open color-charge of the quark-gluon plasma through their constituent quarks. The medium imparts substantial modifications to heavy-flavor hadrons' momentum spectra. For collisions of small systems, the centrality of those collisions affects both the production of heavy-quarks and the medium modifications that the heavy-quarks experience. This analysis uses the PHENIX detector at the Relativistic Heavy Ion Collider, which collected data from proton--gold collisions in 2015, with a trigger to preference the collection of the five-percent most-central collisions. This analysis uses the distance-of-closest-approach of electron tracks to study semileptonic decays from charm and bottom …


Stereospecific Cross-Coupling Reactions With Enantioenriched Electrophiles, Iv Kraja Sep 2023

Stereospecific Cross-Coupling Reactions With Enantioenriched Electrophiles, Iv Kraja

Dissertations, Theses, and Capstone Projects

We have developed a novel palladium-catalyzed stereospecific C(sp3)–C(sp3) Stille cross-coupling reaction between carbastannatrane nucleophiles and α-(trifluoromethyl) benzylic tosylates. This constitutes the first example of a stereospecific C(sp3)–C(sp3) cross-coupling reaction using an enantioenriched electrophile and an alkyltin nucleophile. This system has the potential to be extended to cross-coupling reactions using configurationally stable enantioenriched nucleophiles, thus enabling stereochemical control of two newly formed contiguous stereocenters. Generating enantioenriched α-(trifluoromethyl) benzylic compounds also has importance in pharmaceutical and agrochemical industries.

Through the development of this reaction, our findings show that the addition …


On The Spectrum Of Quaquaversal Operators, Josiah Sugarman Sep 2023

On The Spectrum Of Quaquaversal Operators, Josiah Sugarman

Dissertations, Theses, and Capstone Projects

In 1998 Charles Radin and John Conway introduced the Quaquaversal Tiling. A three dimensional hierarchical tiling with the property that the orientations of its tiles approach a uniform distribution faster than what is possible for hierarchical tilings in two dimensions. The distribution of orientations is controlled by the spectrum of a certain Hecke operator, which we refer to as the Quaquaversal Operator. For example, by showing that the largest eigenvalue has multiplicity equal to one, Charles Radin and John Conway showed that the orientations of this tiling approach a uniform distribution. In 2008, Bourgain and Gamburd showed that this operator …


On The Second Case Of Fermat's Last Theorem Over Cyclotomic Fields, Owen Sweeney Sep 2023

On The Second Case Of Fermat's Last Theorem Over Cyclotomic Fields, Owen Sweeney

Dissertations, Theses, and Capstone Projects

We obtain a new simpler sufficient condition for Kolyvagin's criteria, regarding the second case of Fermat's last theorem with prime exponent p over the p-th cyclotomic field, to hold. It covers cases when the existing simpler sufficient conditions do not hold and is important for the theoretical study of the criteria.


On The Order-Type Complexity Of Words, And Greedy Sidon Sets For Linear Forms, Yin Choi Cheng Sep 2023

On The Order-Type Complexity Of Words, And Greedy Sidon Sets For Linear Forms, Yin Choi Cheng

Dissertations, Theses, and Capstone Projects

This work consists of two parts. In the first part, we study the order-type complexity of right-infinite words over a finite alphabet, which is defined to be the order types of the set of shifts of said words in lexicographical order. The set of shifts of any aperiodic morphic words whose first letter in the purely-morphic pre-image occurs at least twice in the pre-image has the same order type as Q ∩ (0, 1), Q ∩ (0, 1], or Q ∩ [0, 1). This includes all aperiodic purely-morphic binary words. The order types of uniform-morphic ternary words were also studied, …


Dynamics Of Spin And Charge Of Color Centers In Diamond Under Cryogenic Conditions, Richard G. Monge Sep 2023

Dynamics Of Spin And Charge Of Color Centers In Diamond Under Cryogenic Conditions, Richard G. Monge

Dissertations, Theses, and Capstone Projects

Individual quantum systems in semiconductors are currently the most sought-after platform for applications in quantum science. Most notably, the nitrogen-vacancy (NV) center in diamond features a defect deep within the electronic bandgap, making it amenable for precise manipulation to help pave the way to perform fundamental quantum physics experimentation. The NV center also offers long coherence times and versatile spin-dependent fluorescent properties, making it an ideal candidate for a nanoscale magnetometer. Furthermore, multi-color excitation offers deterministic charge state manipulation. While ambient operation has been key to their appeal, bringing NVs to cryogenic conditions opens new opportunities for alternate forms of …


Out-Of-Distribution Generalization Of Deep Learning To Illuminate Dark Protein Functional Space, Tian Cai Sep 2023

Out-Of-Distribution Generalization Of Deep Learning To Illuminate Dark Protein Functional Space, Tian Cai

Dissertations, Theses, and Capstone Projects

Dark protein illumination is a fundamental challenge in drug discovery where majority human proteins are understudied, i.e. with only known protein sequence but no known small molecule binder. It's a major road block to enable drug discovery paradigm shift from single-targeted which looks to identify a single target and design drug to regulate the single target to multi-targeted in a Systems Pharmacology perspective. Diseases such as Alzheimer's and Opioid-Use-Disorder plaguing millions of patients call for effective multi-targeted approach involving dark proteins. Using limited protein data to predict dark protein property requires deep learning systems with OOD generalization capacity. Out-of-Distribution (OOD) …


Phase Transitions And Thermal Stability Of The Magnetic Dual Chiral Density Wave Phase In Cold, Dense Qcd, William G. Gyory Sep 2023

Phase Transitions And Thermal Stability Of The Magnetic Dual Chiral Density Wave Phase In Cold, Dense Qcd, William G. Gyory

Dissertations, Theses, and Capstone Projects

The correct description of strongly interacting matter at extreme densities and low temperatures remains poorly understood. We analyze the magnetic dual chiral density wave (MDCDW) phase, an inhomogeneous chiral condensate that arises in cold, dense quark matter in a magnetic field. We first review the background theory and derive the free energy of the condensate. Then we show how the phase transitions can be studied using a generalized Ginzburg-Landau expansion, and we derive a convenient all-orders formula for the coefficients. Using these tools, we compute the order parameters, critical temperature, and threshold temperature over a range of chemical potentials and …


Fuglede's Conjecture In Some Finite Abelian Groups, Thomas Fallon Sep 2023

Fuglede's Conjecture In Some Finite Abelian Groups, Thomas Fallon

Dissertations, Theses, and Capstone Projects

This dissertation thoroughly examines Fuglede's Conjecture within some discrete settings, shedding light on its intricate details. Fuglede's Conjecture establishes a profound connection between the geometric property of being a tiling set and the analytical attribute of being a spectral set. By exploring the conjecture on various discrete settings, this thesis delves into the implications and ramifications of the conjecture, unraveling its implications within the field.


Synthesis Of Biologically Active Tropolones And Stereochemically Rich Compounds Via Cross-Coupling Reactions, Nana B. Agyemang Sep 2023

Synthesis Of Biologically Active Tropolones And Stereochemically Rich Compounds Via Cross-Coupling Reactions, Nana B. Agyemang

Dissertations, Theses, and Capstone Projects

Over the past years the Murelli lab has established research based on the synthesis and biological evaluations of alpha-hydroxytropolones (alpha-HTs). These seven-membered aromatic rings have three contiguous oxygen atoms that chelates to metals, thus, biologically having the ability to bind dinuclear metalloenzymes and promoting inhibition. Synthetic routes to alpha-HT’s are scarce and therefore has been the main driving force in developing efficient and general synthetic methods to obtain variations in alpha-HTs, enabling SAR studies. The Murelli lab have therefore developed an oxidopyrylium cycloaddition/ring-opening strategy that is able to generate polysubstituted alpha-HTs starting from kojic acid, a cheap and readily available …


Tunable Linear And Nonlinear Metasurfaces Based On Hybrid Gold-Graphene Plasmons, Matthew Feinstein Sep 2023

Tunable Linear And Nonlinear Metasurfaces Based On Hybrid Gold-Graphene Plasmons, Matthew Feinstein

Dissertations, Theses, and Capstone Projects

Optical Metasurfaces are planar structures that are patterned with subwavelength structures and are very thin compared to the wavelength of light. Despite their thinness, these structured materials can strongly interact with incident light to effect the functionalities of conventional optical components, such as rotation of the polarization state, beam steering, lensing, spectral filtering, and holography, to name a few. Metasurfaces can also facilitate nonlinear optical effects, such as the mixing of beams at different frequencies to generate a beam at a new frequency.

The ability to alter the behavior of a metasurface during operation is highly desired for applications such …