Physical Sciences and Mathematics Commons^™

Hemithioindigo-Based Photoswitchable Self- Complementary Hydrogen Bond Arrays, Suendues Noori

Electronic Thesis and Dissertation Repository

Hydrogen bonded materials are slowly conquering grounds in the literature because of their dynamic features which stem from their reversible interactions. Incorporating the ability for light to chemically modify these interactions provides a unique template for innovative, efficient and self-healing materials. This thesis explores the design, synthesis, and characterization of nine derivatives of a well-known organic compound – hemithioindigo – with dual function; as a photoswitch and a novel self-complementary hydrogen bond array. The supramolecular complexes formed moderate to strong associations (63 M^-1 to 1100 M^-1) with spontaneous Gibbs free energy values (-10.3 kJ/mol to -17.3 kJ/mol) …

One-Pot Synthesis Of Bicyclic Piperidines From Donor Acceptor Cyclopropanes, David G. Stephens

Electronic Thesis and Dissertation Repository

The efficient synthesis of heterocyclic compounds is of great importance to organic chemistry. One method for achieving efficiency is through the use and development of one-pot reactions. This thesis describes the planning and development of an extension to the tandem cyclopropane opening Conia-ene reactivity previously reported. A search for a substrate capable of undergoing the reaction was undertaken and the reaction was optimized. The highest yielding conditions tested used catalytic Sc(OTf)₃ and superstoichiometric ZnBr₂, but other catalyst systems also worked. The optimized reaction conditions tolerated 6-membered rings well in addition to 7-membered rings in some rotationally restricted …

Development Of Multi-Functional Molecular Systems For Applications On Nanomaterial Surfaces, Jun Hyeong Park

Electronic Thesis and Dissertation Repository

The glutathione-mediated, retro Michael-type addition reaction is demonstrated to take place at the interface of water-soluble, maleimide-functionalized gold nanoparticles (Maleimide-AuNP). The retro Michael-type addition can be blocked by hydrolyzing the Michael addition thioether adduct at the nanoparticle’s interface. This procedure “locks” the molecule of interest onto the Maleimide-AuNP template, ensuring no loss of the molecular cargo from the nanocarrier. On the other hand, the glutathione-mediated retro Michael-type addition reaction can be exploited for delivering a molecular payload. The Michael donor, 4-mercaptophenylacetic acid was modified with a terminal azide, allowing for addition of cargo through strain-promoted alkyne azide cycloadditions with various …

Electrochemiluminescence Of A Di-Boron Complex, Perovskite And Carbon Quantum Dots, Jonathan M. Wong

Electronic Thesis and Dissertation Repository

The electrochemiluminescence (ECL) of three novel materials was explored in this thesis. A di-boron complex exhibiting crystallization-induced blue shift emission was detected utilizing photoluminescence. This phenomenon was successfully observed in the annihilation pathway, resulting in crystallization-induced blue shift ECL. The effects of coreactant and crystallization-induced enhancements were distinguished utilizing two testing systems. Undoped and Mn-doped CsPbCl₃ perovskites were investigated, as the latter exhibits a dual emissive photoluminescence pathway due to host and dopant emission mechanics. It was discovered that the electrochemiluminescence of Mn-doped CsPbCl₃ proceeds through a triplet-triplet annihilation pathway. Furthermore, the relaxation of the electrochemically generated Mn-doped …

Fabricating Cu2znsns4, Cu2znsn(S,Se)4 And Cuin(S,Se)2 Light-Absorbing Thin Films For Low-Cost Solar Devices., Vaishnavi Raja

Electronic Thesis and Dissertation Repository

In this thesis, Cu₂ZnSnS₄ (CZTS), Cu₂ZnSn(S,Se)₄ (CZTSSe) and CuIn(S,Se)₂ (CISSe) thin-films have been optimized to use as the key light-absorbing and conversion layer for solar cells. CZTS nanocrystals (NCs) were solvothermally synthesized, etched with acetic acid and structurally analyzed using synchrotron spectroscopy. Electrodeposited CZTSSe films showed a non-ideal increase in sulfur with lower selenization temperature and post-process etching. Compositional studies of electrodeposited CISSe films confirmed the decrease in selenium after the acetic acid etching. Through PECMs and other conventional characterization techniques, it was determined that non-etched CZTSSe and CISSe solar devices performed better …

Reconstructing Carbon Dynamics Of Alpine And Temperate Zone Lakes Using Stable Isotopic Analysis, Rebecca M. Doyle

Electronic Thesis and Dissertation Repository

Lake sediments integrate signals from the catchment, atmosphere and water column, offering a unique window through which to view changes in the carbon cycle. Carbon dynamics in lakes are changing due to nitrogen loading and anthropogenic climate warming (ACW), threatening the water quality of lakes. This thesis identifies how the carbon dynamics of lakes have responded to anthropogenically-driven forcings by comparing pre- and post- AD 1850 records preserved in lake sediments. First, the carbon dynamics of Barry Lake (Ontario, Canada), a low-elevation temperate lake, are investigated. Effective moisture (the net of water inputs and evaporation) is reconstructed using the carbon …

Self-Immolative Polymers As A Degradable And Triggerable Class Of Surfactants, Siamak Keshtpour

Electronic Thesis and Dissertation Repository

Self-immolative polymers (SIPs) are degradable polymers that undergo end-to-end depolymerization upon triggering. They have potential for the development of degradable surfactants addressing human and environmental toxicity concerns associated with non-degradable surfactants, but they have not yet been investigated as surfactants. Herein, polyglyoxylamide SIPs with different pendent groups and end-caps were synthesized, envisioning they could serve as depolymerizable analogues of poly(vinyl alcohol) and its derivatives. Polyglyoxylamides with pendent hydroxyls stabilized both PEA and PLA particle suspensions. They showed the potential to undergo triggered degradation, resulting in destabilization of the suspensions. However, untriggered suspensions exhibited poor long-term stability, so further structural tuning …

Cyclization Of Peptide Structures By Creating Metal Foldamers Using 99m-Tc/Re(Co)3, Dhvani D. Oza

Electronic Thesis and Dissertation Repository

Constrained peptides have been successful as therapeutics owing to the rigidity in their framework, allowing them to have enhanced pharmacological properties. Apart from covalent bond based cyclization, constraints can be induced by cyclization using metal coordination. The metals Re and ^99mTc are one of the few metals which have not been studied in great detail for their ability to cyclize linear peptides. A tri-alanine sequence was employed in the peptide backbone due to its ability to form stable helices. In addition, another tripeptide sequence RGD, which is recognized by the integrin a_vb₃, was also used. …

The Rearrangement And Nucleophilic Addition Of Donor-Acceptor Cyclobutane: Novel Methodologies To Access Δ-Lactones And Ring-Opened Products, Donghyun Koo

Electronic Thesis and Dissertation Repository

Donor-acceptor (D-A) cyclobutanes are a well recognized building block in synthetic organic chemistry thanks to their unique reactivity. A variety of synthetic methodologies such as cycloaddition, rearrangement, and ring-opening addition of D-A cyclobutanes have been reported. Among them, the rearrangement reactions of D-A cyclobutanes have attracted less interest compared with other methodologies as they too often require extreme reaction conditions. To further explore the rearrangement reactions of D-A cyclobutanes, in this work a ring expansion rearrangement reaction of D-A cyclobutanes analogous to the Cloke–Wilson reaction of cyclopropanes was examined. By exploiting the solvent effect in a Brønsted acid system, we …

The Electrochemical And Corrosion Study Of Copper For Nuclear Waste Containers Under Deep Geological Disposal Conditions, Mengnan Guo

Electronic Thesis and Dissertation Repository

The proposed method for the safe disposal of Swedish, Finnish, and Canadian high-level nuclear waste (HLNW) is to isolate it in iron or steel containers with an outer copper (Cu) shell or coating and bury it in a deep geological repository (DGR). Copper has been selected as the corrosion barrier due to its stability in the aqueous anoxic environments anticipated in DGR conditions. The container will initially be exposed to humid aerated conditions which will evolve to cool and anoxic as radiation fields in the fuel decay and heat production ceases. When the DGR is cool and anoxic, sulphide (SH …

Chemical Reactions At Metal Surfaces: Functionalization Strategies And Spectroscopic Characterization, Sydney Legge

Electronic Thesis and Dissertation Repository

Tremendous interest in increasing the control over surface properties has led to high demand for new efficient methods for chemical surface modifications. In this work, several approaches toward surface functionalization are explored, and modified surfaces are subsequently characterized using uniquely suited spectroscopic techniques. In the first part of this thesis, strain-promoted alkyne-azide cycloaddition (SPAAC) reactions are investigated for their potential to precisely tune the surface properties of gold substrates at the monolayer level. The utility of SPAAC reactions in preparing biorecognition interfaces for cell adhesion is then examined. Polarization modulation infrared reflection-absorption spectroscopy is used to characterize adsorbed monolayers and …

Development Of A Route To Functional Polymers Via Click Chemistry, Kyle Classen

Electronic Thesis and Dissertation Repository

Functional polymers are desirable due to their use in applications such as drug delivery and bioimaging. This work describes the development of a functional polymer template, expanding upon current routes to creating functional polymer libraries. The methodology utilizes a masking-unmasking strategy to protect and then reveal a strained alkyne for the introduction of functional entities via post-polymerization modification.

The synthesis and characterization by high-resolution mass spectrometry as well as ¹H NMR, UV-Vis, and FT-IR spectroscopy of a masked strained alkyne monomer is presented. First, the strained alkyne, masked by a cyclopropenone moiety, was synthesized. Next, a norbornene derivative was …

Synthesis Of Stable Organic Radical Homo- And Co-Polymers And Their Applications In Solid-State Devices, Michael Anghel

Electronic Thesis and Dissertation Repository

This thesis outlines the synthesis and characterization of a stable organic radical homopolymer incorporating nitronyl nitroxide radicals, as well as the synthesis and characterization of random and block co-polymers incorporating nitronyl nitroxide and 6-oxoverdazyl radicals.

The nitronyl nitroxide homopolymer was synthesized using ring-opening metathesis polymerization (ROMP), yielding polymers with controlled molecular weights and narrow molecular weight distributions. Studies of polymer growth as a function of time and monomer:catalyst ratio revealed the ROMP to be well-behaved. Spectroscopic analysis of the polymer showed that the radicals possessed high radical content, indicating that they are tolerated by ROMP. Conductivity studies of thin-films made …

Hybrid Density Functionals With Proper Exact Exchange, Liyuan Ye

Electronic Thesis and Dissertation Repository

Hybrid density functionals have the best overall performance among standard density func-tional approximations (DFA). According to their original design, hybrid DFAs are supposedto use the exact exchange (EXX). However, when hybrid functionals were originally intro-duced, there was no simple method to compute EXX, so all of their practical implementationsstarted using the Hartree–Fock exchange (HFX), which can be computed easily and is simi-lar to but distinct from EXX. Recent development of an efficient method for computing EXXmade it possible to implement hybrid functionals in line with their original definition. Weimplemented EXX in the PBE0 functional and compared its performance with that …

Theoretical Investigation Of Pressure-Induced Structural Transformations Of Ethylenediamine Bisborane, Rongfeng Guan

Electronic Thesis and Dissertation Repository

High-pressure experiments on hydrogen-rich compounds provide crucial data for the rational design of hydrogen storage materials. Ethylenediamine bisborane (EDAB), BH₃·NH₂CH₂CH₂NH₂·BH₃, is one of the prime candidates for this role due to its high hydrogen content (10 wt%) and good kinetic stability under ambient conditions. Previous studies of EDAB using in situ Fourier-transform infrared (IR) spectroscopy, Raman spectroscopy, and synchrotron X-ray diffraction (XRD) techniques suggested that EDAB undergoes two possible phase transitions in the pressure range of 0 to 17 GPa. However, the crystal structures of the two new …

Effects Of Oxidative Modifications On The Structure And Non-Canonical Functions Of Cytochrome C Studied By Mass Spectrometry, Victor Yin

Electronic Thesis and Dissertation Repository

The peroxidase activity of the mitochondrial protein cytochrome c (cyt c) plays a critical role in triggering programmed cell death, or apoptosis. However, the native structure of cyt c should render this activity impossible due to the lack of open iron coordination sites at its heme cofactor. Despite its key biological importance, the molecular mechanisms underlying this structure-function mismatch remain enigmatic. The work detailed in this dissertation fills this knowledge gap by using mass spectrometry (MS) to decipher the central role that protein oxidative modifications and their associated structural changes play in activating the peroxidase function of cyt c …

Analysis Of Secondary Metabolites Biosynthesized By Pathogenic And Symbiotic Fungi Using High-Resolution Tandem Lc-Ms And Spectral Molecular Networking, Natasha Desrochers

Electronic Thesis and Dissertation Repository

Fungi from Canadian crops affect many aspects of agriculture. For example, ginseng root rot caused by Ilyonectria spp. is a major issue for farmers. Ilyonectria spp. make few reported natural products and it is not known if those products are unique to virulent species. PCA and molecular networking were applied to HRMS data to establish a distinct metabolomic profile of root rot pathogens, characterized by antifungal resorcyclic acid lactones (RALs). These likely protect Ilyonectria from other soil pathogens, which gives it the opportunity to infect ginseng root.

Molecular networking was also applied to fungal endophytes from fruit crops to identify …

Electronic And Local Structures Of Pt-Based Bimetallic Alloy And Core-Shell Systems, Jiatang Chen

Electronic Thesis and Dissertation Repository

This thesis investigates the electronic structure of Pt for catalysis applications. The importance of the Pt 5d band is discussed in terms of the bonding capability of Pt. The oxygen reduction reaction in proton exchange membrane fuel cells is chosen as the catalytic reaction model to illustrate the effect of Pt 5d states on Pt-O interaction. Pt-based bimetallic systems are introduced as a solution for the high price and limited resources of Pt. Despite lower usage of Pt, the tuning capability to optimize the Pt 5d band in bimetallic catalysts is supposed to provide superior catalytic activity. Advanced synchrotron X-ray …

Galvanic Corrosion Of Carbon Steel-Stainless Steel Welds, Mi Li

Electronic Thesis and Dissertation Repository

A water leak in one of the Canada Deuterium Uranium (CANDU) nuclear reactors could lead to galvanic corrosion between the materials of its supporting structures: carbon steel (CS) and stainless steel (SS). This project investigates the effects of physical and chemical solution parameters on the corrosion of galvanically coupled dissimilar CS-SS welds, with the aim of developing a corrosion dynamics model that can be used to assess the long-term integrity of the CANDU reactor structural materials with confidence. The studied parameters were solution pH, temperature, the presence or absence of γ-radiation and the cathode:anode surface area ratio. Multiple electrochemical techniques …

Gamma-Radiolysis Kinetics And Its Role In The Overall Dynamics Of Materials Degradation, Ryan P. Morco

Electronic Thesis and Dissertation Repository

The γ-radiation emitted during radioactive decay of the wastes in a nuclear fuel container can affect container corrosion. When a metal/water system is exposed to γ-radiation both the solid metal and the liquid water (or humid air) absorb energy. This energy dissipates mainly as heat in the metal but induces decomposition of water molecules to yield a range of chemically reactive species. The different chemical environments induced in the metal and liquid phases can change the driving forces for surface reactions and thereby influence the rate and pathway of metal corrosion.

This thesis presents the development of radiolysis kinetic models …

Nonlinear Dynamics Of Carbon Steel Corrosion Under Gamma Radiation, Youn Gyeong Shin

Electronic Thesis and Dissertation Repository

Corrosion of materials is still an unresolved problem affecting a multitude of industries. One of the grand challenges facing the corrosion community is the development of high-fidelity models for corrosion in actual service environments. The difficulties arise since corrosion involves transfer of metal atoms between the solid and solution phases thus making the system non-adiabatic. Interfacial transfer of atoms increases the chance of establishing systemic feedback between chemical reactions and transport processes, which results in chemical oscillation and periodic patterns on the corroding surfaces. These oscillating behavior in electrochemical measurements and pattern formation on corroding surfaces have been reported in …

Iron(Ii) Metal-Ligand Cooperative Catalysts For Endo-Selective Intramolecular Hydrofunctionalization, Benjamin Bridge

Electronic Thesis and Dissertation Repository

Two new cationic Fe(II) P^R₂N^R'₂ complexes, [Fe(Cp*)(P^R₂N^Ph₂)(MeCN)]PF₆ (R = cyclohexyl, 3a) and [Fe(Cp*)(P^R₂N^Ph₂)(MeCN)]PF₆ (R = phenyl, 3b), were synthesized and characterized. The catalytic activity for intramolecular hydrofunctionalization was tested using the benchmark substrate 2-ethynylaniline (EA) and both catalysts effectively produced indole (Ind). The selectivity of catalysis was also tested using 2-ethynylbenzyl alcohol (EBA) and both catalysts formed only the endo product isochromene (IC). These complexes represent the first well-defined Fe(II) catalysts that …

Plasmon-Enabled Physical And Chemical Transformations Of Nanomaterials, Danielle Mcrae

Electronic Thesis and Dissertation Repository

When the electromagnetic field of light is incident on metallic nanostructures of dimensions smaller than the incident wavelength of the light, there is a strong interaction, resulting in an enhanced, highly confined electromagnetic field in the vicinity of the nanostructure. This effect is referred to as a localized surface plasmon resonance, most commonly exploited for plasmon-enhanced spectroscopies, such as surface-enhanced Raman spectroscopy (SERS) and tip-enhanced Raman spectroscopy (TERS). The location, number and intensity of these regions of enhancement, or “hotspots”, can be tuned by changing the nature of the metal, the size, shape and arrangement of the nanoparticles, its surroundings, …

N-Heterocyclic Carbene Ligated Group 11 Trimethylsilylchalcogenolates: Building Blocks For Heterometallic Chalcogenide Molecules, Dickron Richard Nahhas

Electronic Thesis and Dissertation Repository

The synthesis of heterometallic chalcogenide molecules requires the continued investigation into the appropriate reagents necessary to introduce metal – chalcogen bonds in a controlled fashion. Trimethylsilyl metallochalcogenolates (MESiMe₃) act as synthons introducing “ME^–“ in solution upon reacting with an appropriate ternary metal reagent, MX (X= halide, acetate, etc.). Recent work makes use of N–heterocyclic carbenes (NHCs) as a class of ancillary ligand that can stabilize these reagents and the heterometallic chalcogenide molecules obtained with them. Building on previous work, this thesis describes the synthesis of group 11 trimethylsilyl metallochalcogenolates stabilized by bis–1,3–tritylimidazole–2–ylidene (abbreviated ITr) …

The Influence Of Radiolytically Produced Nitric Acid On The Corrosion Resistance Of Copper-Coated Used Nuclear Fuel Containers, Joseph P. Turnbull

Electronic Thesis and Dissertation Repository

In Canada, the proposed disposal method for high level nuclear waste involves sealing the waste in steel containers with a 3 mm outer copper coating and burying it in a deep geologic repository. However, the thickness of the container is significantly reduced making a reassessment of the influence of γ-radiation, emitted by the waste form, on container corrosion a potential licensing requirement. Under humid aerated conditions, the formation of nitric acid is expected, potentially resulting in the formation of droplets or wetted layers on the container surface. Currently available literature on the corrosion of copper in nitric acid does not …

The Incorporation Of Phosphorus Into Polymer Networks For Drug Encapsulation And Release, Tristan D. Harrison

Electronic Thesis and Dissertation Repository

This thesis focuses on the incorporation of phosphonium salts into polymer networks for uses in drug delivery and antibacterial coatings. Compared to their ammonium analogues, which have been extensively investigated, phosphonium salts were of interest due to their different chemical properties and their higher chemical and thermal stabilities. The thesis describes the development of covalently crosslinked hydrogels, ionically crosslinked hydrogels and thin film materials to be utilized in the aforementioned applications.

Covalently crosslinked hydrogels were developed with the targeted application of drug delivery. The hydrogels were created by curing formulations with ultra-violet light. Then, anionic drug molecules were loaded, which …

Paleoproductivity Of Late Holocene Lake Huron, Jamal Khaled Nigim

Electronic Thesis and Dissertation Repository

The paleolimnology of North America’s Lake Huron is described using lead-210 dating, mineralogy, magnetic susceptibility, total organic carbon (TOC), total nitrogen (TN), carbon:nitrogen (C/N) ratio, grain size, and the δ¹³C_OM and δ¹⁵N_TN of organic matter. Sediment cores from Lake Huron’s 6 depositional basins and Georgian Bay span the Medieval Warm Period, Little Ice Age, and Canadian-European settlement. The main organic matter source is lacustrine algae, as indicated by δ¹³C_OM, δ¹⁵N_TN and C/N. Prior to the 19th century, primary production changes are reflected only by small variations in …

Analysis Of Oxidatively Damaged Proteins By Mass Spectrometry, Vincent Saullo

Electronic Thesis and Dissertation Repository

As humans age, exposure to oxidative stress may induce protein degradation or aggregation; both resulting in loss of protein function. Protein oxidative damage remains a dominant pathology in many common ailments. To combat these pathologies, scientists must understand the nature of oxidative modifications and their effects on protein structure and dynamics. This work employs a range of mass spectrometry (MS) methods to characterize and analyze the effects of oxidative damage on the model protein myoglobin (Mb). Mb was oxidized using tert-butyl hydroperoxide, and the resulting modifications were characterized by top-down and bottom-up MS workflows. Hydrogen/deuterium exchange MS indicated elevated structural …