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Electronic Thesis and Dissertation Repository

Applied Mathematics

Molecular Dynamics

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Full-Text Articles in Physical Sciences and Mathematics

A Molecular Dynamics Study Of Polymer Chains In Shear Flows And Nanocomposites, Venkat Bala May 2022

A Molecular Dynamics Study Of Polymer Chains In Shear Flows And Nanocomposites, Venkat Bala

Electronic Thesis and Dissertation Repository

In this work we study single chain polymers in shear flows and nanocomposite polymer melts extensively through the use of large scale molecular dynamics simulations through LAMMPS. In the single polymer chain shear flow study, we use the Lattice Boltzmann method to simulate fluid dynamics and also include thermal noise as per the \emph{fluctuation-dissipation} theorem in the system. When simulating the nanocomposite polymer melts, we simply use a Langevin thermostat to mimic a heat bath. In the single polymer in shear flow study we investigated the margination of a single chain towards solid surfaces and how strongly the shear flow …


Dynamics Of Discs In A Nematic Liquid Crystal, Alena Antipova May 2016

Dynamics Of Discs In A Nematic Liquid Crystal, Alena Antipova

Electronic Thesis and Dissertation Repository

In this thesis, a new way of simulating a two-way coupling between a liquid crystal and an immersed object is proposed. It can be used for objects of various geometries and can be expanded to be used for an object of any geometry. Additionally, a simple yet effective model was suggested for calculations of transmitted light through a nematic liquid crystal sample. This model allowed us to clarify the behavior of a ferromagnetic disc in a nematic liquid crystal observed in experiments and incorrectly interpreted at that time.

Our simulations have demonstrated the following: in the absence of external forces …


Hybrid Lattice Boltzmann - Molecular Dynamics Simulations With Both Simple And Complex Fluids, Frances E. Mackay Apr 2013

Hybrid Lattice Boltzmann - Molecular Dynamics Simulations With Both Simple And Complex Fluids, Frances E. Mackay

Electronic Thesis and Dissertation Repository

The behaviour and properties of colloidal suspensions strongly depend on the interactions arising between the immersed colloidal particles and the solvent. However, modelling such interactions is not at all straightforward; the larger time and length scales experienced by the colloidal particles compared to the solvent molecules makes all-atom molecular dynamics (MD) simulations of such systems completely impractical. Therefore a coarse-grained representation of the fluid is required, along with a method to couple this fluid to the colloidal particles.

In the first part of this thesis, we propose a new method for coupling both point and composite MD particles to an …