Physical Sciences and Mathematics Commons^™

Life Cycle Progression Of Chlainomonas Sp.: A Field Study, Honu Pata, Robin Kodner, Ag Camara, Clare Hanneman, Maya Matsumoto, Dan Van Hees

WWU Honors College Senior Projects

Every year, there are blooms of algae in snowy alpine environments during the summer snow melts. One environment in particular, the snow-on-lake habitat on Bagley Lake in Mt Baker, has been the subject of study by the Kodner lab for many years. In this habitat, we find the genus Chlainomonas which has bloomed in late spring and early summer annually. Our lab has proposed a life cycle for the genus (Matsumoto et al 2024), and there are many morphologically distinct cell stages found in field collected samples. This study has expanded our understanding the life cycle dynamics by examining the …

Implementing Impact: A Lesson On Mysql Databases And Accessibility, Abigayle Peterson, Yasmine Elglaly

WWU Honors College Senior Projects

15% of the world’s people have a disability that could potentially hinder their access to digital information such as bank portals and medical insurance. Digital accessibility, the practice of creating user-friendly technology, helps mitigate these challenges. Despite this fact, college Computer Science (CS) programs fail to recognize the importance of including digital accessibility courses as a degree requirement. Consequently, these CS graduates lack sufficient knowledge to build accessible software when they enter the technology industry, leading to potential company lawsuits for the unethical design of technology. Our research aims to bridge the gap between accessibility knowledge and the CS college …

Birds Of Costa Rica: Journal & Sketchbook, Clara Magsarili

WWU Honors College Senior Projects

This project exhibits the birds of Costa Rica which are extremely beautiful and diverse. I had the opportunity to see 148 species of bird while studying abroad in Costa Rica in the fall of 2023. This project is a collection of personal observations of each species accompanied by a watercolor painting or colored pencil drawing. Inspired by a Tropical Birds class that I took at Veritas University in San Jose, Costa Rica, 'Birds of Costa Rica: Journal & Stetchbook' grew into a piece that encapsulates a lifetime of a love of birds, art, and sharing my passion with others.

Toying With Adapted Toys, Joshua King

WWU Honors College Senior Projects

My project is a design for an adapted toy that occupational therapists (OT) can use when working with kids. OTs are people who help others to be able to do daily tasks that they need to do to live their lives. This can look like helping a person who has been injured or has a disability to accomplish tasks like getting dressed or feeding themselves. It can also involve helping school children to improve their writing or to use assistive technology. My project started out as an idea from my mom who is an OT and was using a coffee …

Developing Two-Dimensional Ammonium Sensors For Use In Marine Sediments, Zoe Kass

WWU Honors College Senior Projects

Nitrogen spatial distribution and denitrification rates are not currently well understood in marine sediments. Both nitrogen distribution and denitrification rates vary widely. Better understanding these processes and the factors that impact them could have a variety of applications, from providing us with a foundation for determining any potential impacts of anthropogenic nitrogen to restoring eel grass beds. This project focused on the development of a two-dimensional ammonium sensor using diffusive equilibrium thin films. We successfully created and calibrated our sensor before deploying it at Padilla Bay to produce a two-dimensional image of the spatial distribution and concentrations of ammonium in …

By The Campfire: How Representation In Video Games Can Be Improved, Hunter Smith

WWU Honors College Senior Projects

By the Campfire is a video game designed with accurate and thorough representation in mind from the start of development. Its purpose is to showcase the ways in which the player character in a video game can accurately represent anyone who plays it, and that the non-player characters in a video game can be generated in a way that diverse groups can be represented without harmfully misrepresenting them. This project includes a document that explains the process by which this game was created and why certain choices were made when implementing the games systems. The document details a survey that …

An Analysis Of Clinopyroxene Reaction Rims As Assimilation Chronometers At Cinder Cone Volcano, Lassen National Volcanic Park, California, Annabelle Carozza

WWU Honors College Senior Projects

Cinder Cone is a monogenetic cinder cone volcano located in Lassen National Volcanic Park, California. It erupted in 1666 CE and had three eruptive phases, each producing tephra and lava flows that ranged in style from Hawaiian (low explosivity) to Strombolian (moderate to high explosivity). This eruptive style variability at Cinder Cone was not caused by viscosity or volatile differences, and ascent rate has been proposed as a causal factor in the observed explosivity difference between phases. Ubiquitous quartz crystals are entrained within tephra and lava and were likely sourced from the assimilation of a granitic basement rock underlying the …

Time As A Line: Helping Children Make Abstract Ideas Concrete, Rachel Mae Stenner

WWU Honors College Senior Projects

This is a math education project that included research, a lesson plan, and actual in the classroom work with students. Under the advisement of Dr. Rebecca Borowski, I looked into how time, an abstract idea, is taught to young children who are just starting to learn what measurement is, and examined how teachers can better teach time as a more concrete topic. This focused on the idea of turning the abstract time concepts that are thrown at children into the more abstract ideas of both circular and then linear number lines, using physical materials to help guide the process.

Shared Roots: A Geochemical Investigation Of Basaltic Andesites To Understand Magmatic Cogenesis At The Middle Sister And South Sister Volcanoes, Central Oregon, Sean Francis Halstead

WWU Honors College Senior Projects

The Middle Sister and South Sister volcanoes, near Bend, Oregon, are overlapping, active Cascade Arc stratovolcanoes which share a complex, contemporaneous eruptive history. This history is characterized by an extreme compositional diversity of lavas erupted in alternating phases of high activity from one neighboring volcano to the other, with both vents producing material ranging from basaltic andesite to rhyolite. This system is understood to be predominantly fed by basaltic andesites fractionated from partial mantle melts within the lower crust, but magma compositions are additionally impacted by mixing, assimilation, and crustal contamination while in transit to the surface. Thus, the subterranean …

Blood Coagulation Factor Ix: Purification, Activation, Crystallization, Juliet Mcgill

WWU Honors College Senior Projects

This paper presents readers with an optimized procedure for the purification, activation, and crystallization of selected blood coagulation Factor IX double mutant (FIX_2). Through the completion of this work, we aim to enhance future biochemical and structural studies by providing an easier means for the FIX_2 production, in order to increase understanding of the protein’s function within the blood coagulation cascade. The initiation of the blood coagulation cascade is brought on by activation of inactive Factor VIII (FVIII) protein though contact with tissue factor, the FVIII protein then binds to an activated platelet surface where it must wait for its …

Studying The South Lake Whatcom Fire, Lillian Buck

WWU Honors College Senior Projects

This study investigates the ecological consequences of the South Lake Whatcom Fire, which occurred in August 2023, focusing on soil health and water quality. Lake Whatcom, historically shaped by indigenous settlements and 19th-century logging and mining activities, is a critical water source for Bellingham residents. The fire, sparked by lightning, was managed with hand-dug lines, and contained by September 2023. Soil analysis revealed a significant reduction in the organic matter/duff layer depth in burned areas compared to unburned sections, highlighting potential challenges for soil recovery and ecosystem health. Erosion concerns were raised, emphasizing the need for post-fire management strategies. This …

Interactive Learning With Plankton: Constructing Kiosks For The Sea Discovery Center, Sierra Schuster

WWU Honors College Senior Projects

This project involved creating two interactive kiosks for the SEA Discovery Center to better engage visitors on their plankton exhibits. HTML, CSS, and ReactJS were used to construct web apps that could be launched in Chromium’s Kiosk Mode upon system boot time so that the application would automatically run, preventing visitors to the Center from gaining access to the computer beyond the main program. They are hosted externally on Western Washington University’s Cyber Range and are run on the kiosk machine by Raspberry Pi 4s that access it via a URL. The informational kiosk was designed to give visitors an …

Double Trouble: Applying Deep Learning To Ebs Systems, Noah Reneau, Hidemi Mitani Shen, Nicholas Chandler, Ian Pourlotfali

WWU Honors College Senior Projects

Eclipsing binaries (EB) are fundamental stellar laboratories that can be detected via long-term photometric monitoring. Analyzing the orbital motion of these EBs offers a unique ability to directly measure the parameters of both stars in the system, including masses, radii, and effective temperatures, without relying on theoretical models. Nonetheless, this process is non-trivial, and arriving to a correct solution for a given system can often take significant time. In the ongoing work, we are developing deep learning models capable of providing fast and accurate predictions of these fundamental parameters in these EBs, which will enable the characterization of an increasingly …

Animal-Sediment Relationships Reexamined, A Meta-Analysis, Christine Franzen

WWU Honors College Senior Projects

The patterns associated with the influence of grain size on the spatial variation of the deposit and suspension-feeding groups have been studied since the late 1950s. The foundational paper for the theory, Sanders (1958), proposed that a higher proportion of clay and silt-sized grains in the sediments correlates with a higher proportion of deposit feeders compared to suspension feeders. This theory has become widely accepted and taught in textbooks despite subsequent papers indicating differing observations. Through a meta-analysis, this study examines whether the observation from Sanders (1958) was indicative of a general rule or an anomaly. Additionally, this study aims …

Lagrangian Mechanics And The Motion Of A T-Handle, Eric Maurer

WWU Honors College Senior Projects

This paper begins by deriving the equations of motion for the Lagrangian formulation of mechanics. Lagrangian mechanics describes the same thing as the traditional Newtonian mechanics (which is what is taught in most undergrad physics classes), but rather than model the system through forces, it models the system through energy. Energy is conserved in a system, which allows the Lagrangian formulation to model certain types of systems in a more efficient way than the Newtonian formulation.

Next, the paper explores rigid body motion, specifically looking at the motion of the angular momentum. The goal of this part is to explain …

Investigations On The Active Catalyst In Pd Catalyzed Organic Reactions, Riley Mcgraw

WWU Honors College Senior Projects

Cross coupling and C-H functionalization reactions are valuable tools in the synthesis of pharmaceuticals, natural products, fine chemicals, and electronics. Molecular precatalysts are frequently used in both reactions but because the reactions use conditions like those employed in intentional preparation of nanoparticles, the presence of nanoparticles is highly likely for both systems. In the case of the cross-coupling reaction, nanoparticles have been shown to have catalytic relevance, but C-H functionalization reactions are widely thought to occur by means of a homogenous catalyst. To better understand the state of the active catalyst, a method of homogeneity analysis by centrifuge is proposed. …

Using Mineral Magnetism To Characterize Compositions Of Fe-Ti Oxide Phases Of The Sulphur Creek Lava Flow (Kulshan), Elika Zilis

WWU Honors College Senior Projects

The aim of this study is to examine variations in the composition of Fe-Ti oxide minerals in the Sulphur Creek lava flow (SE margin of Kulshan), using magnetic techniques and electron microscopy. Geochemical and petrological data from these rocks dated ~9.8 ka may be a product of two distinct magma pulses (Garvey, 2002) with two distinct compositions: andesitic basalt and basalt. The composition of cubic oxides (magnetite and ulvöspinel) is influenced by the geochemistry of the crystallizing magma and can be used to provide information about the chemical evolution of these magmas, but also to help frame future paleomagnetic studies …

Evaluating Domain Specific Llm Performance Within Economics Using The Novel Econqa Dataset, Tate Van Patten

WWU Honors College Senior Projects

This paper describes a novel dataset, EconQA, constructed to assess the performance of large language models within multiple choice economics questions. I present results from 10 experiments, varying prompts and model choices. Results challenge previous findings that prompt choice makes a large impact on quality of response. Using the GPT 3.5 Turbo model, observed performance levels ranged from 70-77% for all prompt choices, with the no prompt baseline scoring 73%. When prompted to use Chain-of-Thought reasoning with examples, performance was highest at 76%. Contrary to previous research, performance on mathematical questions when prompted with Chain-of-Thought was high. This paper closes …

Synthesis And Characterization Of Hydroxy-Functionalized Copper Indium Disulfide Quantum Dots, Julia Schexnayder

WWU Honors College Senior Projects

Quantum dots offer tunable electronic and optical properties due to the quantum confinement effect, making them desirable for various applications. However, their native hydrophobic form requires surface chemistry modification for certain applications. This research explores the method of ligand exchange using 11-mercapto-1-undecanol for improving the stability of copper indium disulfide (CIS) quantum dot (QD) nanoparticles in polar environments. The effects of this ligand exchange on QD chemical composition, optical properties, hydroxy-reactivity, and hydrodynamic radius are characterized. Analysis of characterization results indicates successful surface modification through hydroxyfunctionalization, as confirmed by 1H-NMR and IR spectroscopy. The desired optical properties of the QDs …

Databases And Deliberation, Britany Orozco, Quentin Jensen

WWU Honors College Senior Projects

This paper describes the process taken to build a digital form-collection system in a business context. By starting with the motivation for the project, we can gather the requirements necessary to complete before we can consider the project complete. From there, we start discussing the client-server-database architecture principles that must be reviewed before we can design our database. Database design fundamentals are reviewed, such as what a schema or entity relationship diagram is, and those fundamentals are used to design the database. Next, we show how a development environment is chosen. With the environment set up, we then discuss how …

The Role Of Volatile Enrichment In The Radiogenic Heating And Thermal Evolution Of Rocky Exoplanets, Ula Jones, Asmaa Boujibar

WWU Honors College Senior Projects

Internal heating in terrestrial planets is a fundamental physical process controlling the internal structure of a planet, mantle convection, volcanic activity, and the generation of magnetic fields. Internal heating results from various processes including radioactive decay and accretional energy, as well as additional irradiation and tidal heating in planets with short orbital periods. The largest long-term heat source for terrestrial planets is radioactive heating, especially from the decay of uranium (U), thorium (Th), and potassium (K) isotopes. K is a moderately volatile element, while U and Th are refractory elements; during planetary accretion volatiles are depleted relative to refractory elements, …

From Filth It Rises Presentation, Griffin Hartz

WWU Honors College Senior Projects

This project contains the design, development, and partial implementation of a survival horror game made in Unity engine. The highlight of the game's design is the machine learning agents used to create the game's enemy AI, developed with Unity's MLagents system. In the game, the player controls a construction worker who traveled into a sewer to pursue a missing coworker. They eventually find their way into a crumbling undercity where their coworker was trapped, and soon become hunted by the mutant monster that killed their coworker. Their goal is to escape the ruins without being preyed upon by the mutant …

Solving The Genius Square: Using Math And Computers To Analyze A Polyomino Tiling Game, Noah Jensen

WWU Honors College Senior Projects

This paper investigates if the claim of the game Genius Square is true, that all 62,208 boards that its dice can roll are solvable. The gameboard is a 6 by 6 grid and the objective of the game is to tile a board that has 7 blockers, quasi-randomly placed by the dice, with 9 polyominoes consisting of 1, 2, 3, and 4 squares. In order to implement a model of linear systems created by John Burkardt and M.R. Garvie, code was developed using Python and Matlab. With this code, it was shown that all 62,208 boards are solvable. The number …

A Change-Point Analysis Of Air Pollution Levels In Silao, Mexico And Fresno, California, Rachael Goodwin

WWU Honors College Senior Projects

We analyzed PM10 levels in the city of Silao, Mexico, as well as PM2.5 and PM10 levels in Fresno, California to determine if there was a shift in air pollution levels in either location. A change point based analysis was used to determine if there was a shift in air pollution levels. In the city of Silao, there was a significant increase in PM10 levels, but there was no significant change in Fresno for either pollutant.

Silicon And Oxygen In Earth’S Core: Applications Of Machine Learning To Metal-Silicate Equilibria And Core Formation, Ruben Keane

WWU Honors College Senior Projects

Within Earth’s core, light elements (Si, O, C, S, N, H) are known to make up a small fraction of the total mass of the core with respect to heavy elements. The degree to which these elements exist in the cores of terrestrial planets have geophysical and geochemical implications, most notably the presence of core convection and a geodynamo, thermal conductivity within the core, and core temperature. Comparison of the composition of chondrites to Earth’s mantle composition and the Preliminary Reference Earth Model have given an estimation of about 10 % light elements in Earth’s core. The concentrations of each …

Digital Archaeology: Detection Of Archaeological Structures Using Convolutional Neural Networks On Aerial Lidar Data, Katie Larue

WWU Honors College Senior Projects

Archaeology is a field that is mostly done by hand. Archaeologists explore remote and unknown areas of the world to find undiscovered civilizations that will give us any idea about how people lived in the past. To speed up this process, Airborne light detection and ranging or LiDAR systems have been used to great effect to speed up this processing. However, we still require domain experts to annotate this information to confirm structures. Deep learning has the potential to speed up this process and the following presentation is a basic overview of machine learning, popular types of deep learning models, …

How-To: Make Your House A Battery--How Demand-Side Management Will Be One Key To A Greener Future, Explained For Popular Audiences., Olivia Kaulfus

WWU Honors College Senior Projects

Demand-side management will be used to increase the electric grid's flexibility and make it easier to achieve a clean energy future. But what is it? How will it affect me, and what do I need to know? This brochure (and slide deck from the in-person presentation) will hopefully give you a bit of insight into the greater world of demand-side management. Don't know anything about electricity? No problem. Only the most necessary information is provided by this little handout. Most exciting of all is that demand-side management could be coming to a utility near you and could even help lower …

Salmon Against Humanity: Are Hatcheries A Part Of Salmon Recovery?, Janine Fong

WWU Honors College Senior Projects

Salmon hatcheries have been in place since the late 1800s, but they are controversial parts of salmon recovery. Evidence has been found that hatcheries may be producing weaker fish and harming naturally-occurring populations. However, many of these issues can be addressed with hatchery reforms. There are also external factors to consider, such as the needs of those who depend on salmon and the loss of habitat. In the larger scheme of things, hatcheries appear to be important tools that can be utilized better in order to conserve salmon more effectively. This paper explores the hatchery controversy, from tribal rights to …

Overwintering Eagle Demographics On The Nooksack River, Collette Webb

WWU Honors College Senior Projects

This paper provides a look into the demographics of overwintering eagles on the Nooksack River and their ties to salmon. Viewing overwintering eagles on the Nooksack River has become somewhat of a tradition for locals wanting to catch sight of these American icons in their natural habitat and consuming another PNW favorite; salmon. However, climate change and ever increasing ecological pressures have begun to alter the eagle-salmon food web dynamic in ways that are just starting to be explored. During the winter, eagles rely on the supply of salmon carcasses that wash onto the river banks and gravel bars after …

Biological Oscillator Synchronization With The Cellular Potts Model, Rose Una

WWU Honors College Senior Projects

Similar to how neurons synchronize their firing in the brain, individual cells of certain single-celled species can synchronize their internal oscillatory molecular clocks to those of their neighboring cells. This study develops and analyzes an abstract, discrete agent-based computational model to investigate the movement and synchronization of internal oscillators in biological cells. We adapt a Cellular Potts Model to explore this oscillator synchronization process with two-dimensional cells on a square lattice. Model assumptions are motivated by behavior in single-celled species of slime mold (Dictyostelium discoideum) and slime bacteria (myxobacteria). The effects of the spatial attraction parameter and the neighboring clock …