Physical Sciences and Mathematics Commons^™

A Multistate Competing Risks Framework For Preconception Prediction Of Pregnancy Outcomes, Kaitlyn Cook, Neil J. Perkins, Enrique Schisterman, Sebastien Haneuse

Statistical and Data Sciences: Faculty Publications

Background: Preconception pregnancy risk profiles—characterizing the likelihood that a pregnancy attempt results in a full-term birth, preterm birth, clinical pregnancy loss, or failure to conceive—can provide critical information during the early stages of a pregnancy attempt, when obstetricians are best positioned to intervene to improve the chances of successful conception and full-term live birth. Yet the task of constructing and validating risk assessment tools for this earlier intervention window is complicated by several statistical features: the final outcome of the pregnancy attempt is multinomial in nature, and it summarizes the results of two intermediate stages, conception and gestation, whose outcomes …

Microbial Ecology Of A Shallow Alkaline Hydrothermal Vent: Strýtan Hydrothermal Field, Eyjafördur, Northern Iceland, Katrina I. Twing, L. M. Ward, Zachery K. Kane, Alexa Sanders, Roy Edward Price, H. Lizethe Pendleton, Donato Giovannelli, William J. Brazelton, Shawn E. Mcglynn

Geosciences: Faculty Publications

Strýtan Hydrothermal Field (SHF) is a submarine system located in Eyjafördur in northern Iceland composed of two main vents: Big Strýtan and Arnarnesstrýtan. The vents are shallow, ranging from 16 to 70 m water depth, and vent high pH (up to 10.2), moderate temperature (Tmax ∼70°C), anoxic, fresh fluids elevated in dissolved silica, with slightly elevated concentrations of hydrogen and methane. In contrast to other alkaline hydrothermal vents, SHF is unique because it is hosted in basalt and therefore the high pH is not created by serpentinization. While previous studies have assessed the geology and geochemistry of this site, the …

Extracellular Dnases Facilitate Antagonism And Coexistence In Bacterial Competitor-Sensing Interference Competition, Aoi Ogawa, Christophe Golé, Maria Bermudez, Odrine Habarugira, Gabrielle Joslin, Taylor Mccain, Autumn Mineo, Jennifer Wise, Julie Xiong, Katherine Yan, Jan A.C. Vriezen

Biological Sciences: Faculty Publications

Over the last 4 decades, the rate of discovery of novel antibiotics has decreased drastically, ending the era of fortuitous antibiotic discovery. A better understanding of the biology of bacteriogenic toxins potentially helps to prospect for new antibiotics. To initiate this line of research, we quantified antagonists from two different sites at two different depths of soil and found the relative number of antagonists to correlate with the bacterial load and carbon-to-nitrogen (C/N) ratio of the soil. Consecutive studies show the importance of antagonist interactions between soil isolates and the lack of a predicted role for nutrient availability and, therefore, …

Playing Unbound: Towards A Radically Intersectional Hci, Johanna Brewer

Computer Science: Faculty Publications

This short essay is a call to action for digital games researchers to positively transform the future of HCI by meaningfully adopting an explicitly intersectional approach to our work as a scholarly community.

Proceedings Of The Tenth Annual Conference On Advances In Cognitive Systems, Jamie C. Macbeth, Leilani Gilpin, Michael T. Cox

Computer Science: Faculty Publications

We hope you will enjoy these proceedings of the Tenth Annual Conference on Advances in Cognitive Systems (ACS). The event was the first hybrid meeting of ACS in is history. It took place virtually via Zoom and physically at George Mason University in Arlington, Virginia, from Saturday, November 19, to Tuesday, November 22, 2022. We are so delighted to be part of continuing this important venue that focuses on the original long-standing goals and challenges of artificial intelligence research. The conference program consisted of 37 papers consisting of ten 30-minute long talks, fifteen 20-minute short talks, twelve posters, three invited …

Mountain Rivers Reveal The Earthquake Hazard Of Geologic Faults In Silicon Valley, Felipe Aron, Samuel A. Johnstone, Andreas Mavrommatis, Robert Sare, Frantz Maerten, John P. Loveless, Curtis W. Baden, George E. Hilley

Geosciences: Faculty Publications

The 1989, Mw = 6.9 Loma Prieta earthquake resulted in tens of lives lost and cost California almost 3% of its gross domestic product. Despite widespread damage, the earthquake did not clearly rupture the surface, challenging the identification and characterization of these hidden hazards. Here, we show that they can be illuminated by inverting fluvial topography for slip-and moment accrual-rates—fundamental components in earthquake hazard assessments—along relief-generating geologic faults. We applied this technique to thrust faults bounding the mountains along the western side of Silicon Valley in the San Francisco Bay Area, and discovered that these structures may be capable of …

The Link Between Democratic Institutions And Population Health In The American States, Julianna Pacheco, Scott Lacombe

Government: Faculty Publications

Context: This project investigates the role of state-level institutions in explaining variation in population health in the American states. Although cross-national research has established the positive effects of democracy on population health, little attention has been given to subnational units. The authors leverage a new data set to understand how political accountability and a system of checks and balances are associated with state population health. Methods: The authors estimate error correction models and two-way fixed effects models to estimate how the strength of state-level democratic institutions is associated with infant mortality rates, life expectancy, and midlife mortality. Findings: The authors …

Intact Polar Brgdgts In Arctic Lake Catchments: Implications For Lipid Sources And Paleoclimate Applications, Jonathan H. Raberg, Edgart Flores, Sarah E. Crump, Greg De Wet, Nadia Dildar, Gifford H. Miller, Áslaug Geirsdóttir, Julio Sepúlveda

Geosciences: Faculty Publications

Paleotemperature histories derived from lake sediment archives provide valuable context for modern and future climate changes. Branched glycerol dialkyl glycerol tetraether (brGDGT) lipids are a valuable tool in such pursuits due to their empirical correlation with temperature and near ubiquity in nature. However, the relative contributions of terrestrial and lacustrine sources of brGDGTs to lake sediments is site-dependent and difficult to constrain. Here, we explored the potential for intact brGDGTs—the complete lipids with polar head groups (HGs) still attached—to provide insight into the sources of brGDGTs on the landscape and their contributions to the sedimentary record in a set of …

Magnetoquantum Oscillations In The Specific Heat Of A Topological Kondo Insulator, Patrick G. Labarre, Andreas Rydh, J. Palmer-Fortune, J. A. Frothingham, S. T. Hannahs, Arthur P. Ramirez, Nathanael Alexander Fortune

Physics: Faculty Publications

Surprisingly, magnetoquantum oscillations (MQO) characteristic of a metal with a Fermi surface have been observed in measurements of the topological Kondo insulator SmB6. As these MQO have only been observed in measurements of magnetic torque (dHvA) and not in measurements of magnetoresistance (SdH), a debate has arisen as to whether the MQO are an extrinsic effect arising from rareearth impurities, defects, and/or aluminum inclusions or an intrinsic effect revealing the existence of charge-neutral excitations. We report here the first observation of magnetoquantum oscillations in the low-temperature specific heat of SmB6. The observed frequencies and their angular dependence for these flux-grown …

Passages: The Large Millimeter Telescope And Alma Observations Of Extremely Luminous High-Redshift Galaxies Identified By The Planck, Derek A. Berman, Min S. Yun, K. C. Harrington, P. Kamieneski, J. Lowenthal, B. L. Frye, Q. D. Wang, G. W. Wilson, I. Aretxaga, M. Chavez, R. Cybulski, V. De La Luz, N. Erickson, D. Ferrusca, D. H. Hughes, A. Montaña, G. Narayanan, D. Sánchez-Argüelles, F. P. Schloerb, K. Souccar, E. Terlevich, R. Terlevich, J. A. Zavala

Astronomy: Faculty Publications

The Planck All-Sky Survey to Analyze Gravitationally-lensed Extreme Starbursts project aims to identify a population of extremely luminous galaxies using the Planck all-sky survey and to explore the nature of their gas fuelling, induced starburst, and the resulting feedback that shape their evolution. Here, we report the identification of 22 high-redshift luminous dusty star-forming galaxies (DSFGs) at z = 1.1-3.3 drawn from a candidate list constructed using the Planck Catalogue of Compact Sources and Wide-field Infrared Survey Explorer all-sky survey. They are confirmed through follow-up dust continuum imaging and CO spectroscopy using AzTEC and the Redshift Search Receiver on the …

The Jwst Early Release Science Program For The Direct Imaging And Spectroscopy Of Exoplanetary Systems, Sasha Hinkley, Aarynn L. Carter, Shrishmoy Ray, Andrew Skemer, Beth Biller, Elodie Choquet, Maxwell A. Millar-Blanchaer, Stephanie Sallum, Brittany Miles, Niall Whiteford, Polychronis Patapis, Marshall Perrin, Laurent Pueyo, Glenn Schneider, Karl Stapelfeldt, Jason Wang, Kimberly Ward-Duong, Brendan P. Bowler, Anthony Boccaletti, Julien H. Girard, Dean Hines, Paul Kalas, Jens Kammerer, Pierre Kervella, Jarron Leisenring, Eric Pantin, Yifan Zhou, Michael Meyer, Michael C. Liu, Mickael Bonnefoy, Thayne Currie, Michael Mcelwain

Astronomy: Faculty Publications

The direct characterization of exoplanetary systems with high-contrast imaging is among the highest priorities for the broader exoplanet community. As large space missions will be necessary for detecting and characterizing exo-Earth twins, developing the techniques and technology for direct imaging of exoplanets is a driving focus for the community. For the first time, JWST will directly observe extrasolar planets at mid-infrared wavelengths beyond 5 μm, deliver detailed spectroscopy revealing much more precise chemical abundances and atmospheric conditions, and provide sensitivity to analogs of our solar system ice-giant planets at wide orbital separations, an entirely new class of exoplanet. However, in …

Implementing Github Actions Continuous Integration To Reduce Error Rates In Ecological Data Collection, Albert Y. Kim, Valentine Herrmann, Ross Barreto, Brianna Calkins, Erika Gonzalez-Akre, Daniel J. Johnson, Jennifer A. Jordan, Lukas Magee, Ian R. Mcgregor, Nicolle Montero, Karl Novak, Teagan Rogers, Jessica Shue, Kristina J. Anderson-Teixeira

Statistical and Data Sciences: Faculty Publications

Accurate field data are essential to understanding ecological systems and forecasting their responses to global change. Yet, data collection errors are common, and data analysis often lags far enough behind its collection that many errors can no longer be corrected, nor can anomalous observations be revisited. Needed is a system in which data quality assurance and control (QA/QC), along with the production of basic data summaries, can be automated immediately following data collection.

Here, we implement and test a system to satisfy these needs. For two annual tree mortality censuses and a dendrometer band survey at two forest research sites, …

Frobenius Objects In The Category Of Spans, Ivan Contreras, Molly Keller, Rajan Amit Mehta

Mathematics Sciences: Faculty Publications

We consider Frobenius objects in the category Span, where the objects are sets and the morphisms are isomorphism classes of spans of sets. We show that such structures are in correspondence with data that can be characterized in terms of simplicial sets. An interesting class of examples comes from groupoids.

Our primary motivation is that Span can be viewed as a set-theoretic model for the symplectic category, and thus Frobenius objects in Span provide set-theoretic models for classical topological field theories. The paper includes an explanation of this relationship.

Given a finite commutative Frobenius object in Span, one can obtain …

Near-Infrared Accretion Signatures From The Circumbinary Planetary-Mass Companion Delorme 1 (Ab)B, S. K. Betti, K. B. Follette, K. Ward-Duong, Y. Aoyama, G. D. Marleau, J. Bary, C. Robinson, M. Janson, W. Balmer, G. Chauvin, P. Palma-Bifani

Astronomy: Faculty Publications

Accretion signatures from bound brown dwarf and protoplanetary companions provide evidence for ongoing planet formation, and accreting substellar objects have enabled new avenues to study the astrophysical mechanisms controlling the formation and accretion processes. Delorme 1 (AB)b, a ?1/430-45 Myr circumbinary planetary-mass companion, was recently discovered to exhibit strong Hα emission. This suggests ongoing accretion from a circumplanetary disk, somewhat surprising given canonical gas disk dispersal timescales of 5-10 Myr. Here, we present the first NIR detection of accretion from the companion in Paβ, Pa?3, and Br?3 emission lines from SOAR/TripleSpec 4.1, confirming and further informing its accreting nature. The …

A Climate Of Confessionalization: Famine And Difference In The Late Ottoman Empire, Matthew Ghazarian

Environmental Science and Policy: Faculty Publications

After the 1877–78 Russo-Ottoman War, the Ottoman Empire saw the rise of ethnic and sectarian clashes in Anatolia, the Balkans, and elsewhere, and the task of explaining that rise remains unfinished. Many have examined the intellectual formations of ethnic and sectarian solidarities after 1878, but the availability of new ideas cannot alone account for their widespread uptake. Why after 1878 did ordinary people respond more to calls upon ethnic and sectarian solidarity? Drawing on sources surrounding the 1879 famine in the Ottoman East, this article steps away from imperial metropoles to examine overlapping environmental, financial, and technological disjunctures. Adopting the …

Quantum Counter-Terms For Lattice Field Theory On Curved Manifolds, Evan K. Owen, Casey E. Berger, Richard C. Brower, George T. Fleming, Andrew D. Gasbarro, Timothy G. Raben

Physics: Faculty Publications

We present the necessity of counter-terms for Quantum Finite Element (QFE) simulations of ϕ4 theory on non-trivial simplicial manifolds with semi-regular lattice spacing. By computing the local cut-off dependence of UV divergent diagrams we found that the symmetries of the continuum theory are restored for ϕ4 theory on the manifolds S2 and S2 × R in the weak coupling regime [1, 2]. Here we consider the construction of non-perturbative local counter-terms in an attempt to approach the strong coupling Wilson-Fisher IR fixed point.

Prospects For Lattice Qfts On Curved Riemann Manifolds, Richard C. Brower, Casey E. Berger, George T. Fleming, Andrew D. Gasbarro, Evan K. Owen, Timothy G. Raben, Chung I. Tan, Evan S. Weinberg

Physics: Faculty Publications

Conformal or near conformal Quantum Field Theories QFT) would benefit from a rigorous non-perturbative lattice formulation beyond the flat Euclidean space, Rd. Although all UV complete QFT are generally acknowledged to be perturbatively renormalizable on smooth Riemann manifolds, non-perturbative realization on simplicial lattices (triangulation) encounter difficulties as the UV cut-off is removed. We review the Quantum Finite Element (QFE) method that combines classical Finite Element with new quantum counter terms designed to address this. The construction for maximally symmetric spaces (Sd, R × Sd−1 and AdSd+1) is outlined with numerical tests on R × S2 and a description of theoretical …

Taking Action: Managing Inclusive Excellence In Academia, Lesley Ann Giddings, Christine Salomon

Chemistry: Faculty Publications

No abstract provided.

Improved Orbital Constraints And Hα Photometric Monitoring Of The Directly Imaged Protoplanet Analog Hd 142527 B, William O. Balmer, Katherine B. Follette, Laird M. Close, Jared R. Males, Robert J. De Rosa, Jeá I. Adams Redai, Alex Watson, Alycia J. Weinberger, Katie M. Morzinski, Julio Morales, Kimberly Ward-Duong, Laurent Pueyo

Astronomy: Faculty Publications

Companions embedded in the cavities of transitional circumstellar disks have been observed to exhibit excess luminosity at Hα, an indication that they are actively accreting. We report 5 yr (2013-2018) of monitoring of the position and Hα excess luminosity of the embedded, accreting low-mass stellar companion HD 142527 B from the MagAO/VisAO instrument. We use pyklip, a Python implementation of the Karhunen-Loeve Image Processing algorithm, to detect the companion. Using pyklip forward modeling, we constrain the relative astrometry to 1-2 mas precision and achieve sufficient photometric precision (±0.2 mag, 3% error) to detect changes in the Hα contrast of the …

Relaxed Wythoff Has All Beatty Solutions, Jon Kay, Geremías Polanco

Mathematics Sciences: Faculty Publications

We find conditions under which the P-positions of three subtraction games arise as pairs of complementary Beatty sequences. The first game is due to Fraenkel and the second is an extension of the first game to non-monotone settings. We show that the P-positions of the second game can be inferred from the recurrence of Fraenkel's paper if a certain inequality is satisfied. This inequality is shown to be necessary if the P-positions are known to be pairs of complementary Beatty sequences, and the family of irrationals for which this inequality holds is explicitly given. We highlight several games in the …

Digital Intimacy In Real Time: Live Streaming Gender And Sexuality, Bo Ruberg, Johanna Brewer

Computer Science: Faculty Publications

This article serves as the guest editors’ introduction to the Television and New Media special issue dedicated to gender and sexuality in live streaming. Live streaming is a key part of the contemporary digital media landscape; it sits at the center of wide-reaching shifts in how culture, entertainment, and labor are expressed and experienced online today. Gender and sexuality are crucial elements of live streaming. Across live streaming’s many forms, these elements manifest in myriad ways: from gendered performances to gender-based harassment, from LGBTQ community building to real-time sex work. This special issue models an interdisciplinary approach to studying gender …

Accountable Data: The Politics And Pragmatics Of Disclosure Datasets, Lindsay Poirier

Statistical and Data Sciences: Faculty Publications

This paper attends specifically to what I call "disclosure datasets"- tabular datasets produced in accordance with laws requiring various kinds of disclosure. For the purposes of this paper, the most significant defining feature of disclosure datasets is that they aggregate information produced and reported by the same institutions they are meant to hold accountable. Through a series of case studies of disclosure datasets in the United States, I specifically draw attention to two concerns with disclosure datasets: First, for disclosure datasets, there is often political and social mobilization around the definitions that determine reporting thresholds, which in turn implicates what …

Images Of Embedded Jovian Planet Formation At A Wide Separation Around Ab Aurigae, Thayne Currie, Kellen Lawson, Glenn Schneider, Wladimir Lyra, John Wisniewski, Carol Grady, Olivier Guyon, Motohide Tamura, Takayuki Kotani, Hajime Kawahara, Timothy Brandt, Taichi Uyama, Takayuki Muto, Ruobing Dong, Tomoyuki Kudo, Jun Hashimoto, Misato Fukagawa, Kevin Wagner, Julien Lozi, Jeffrey Chilcote, Taylor Tobin, Tyler Groff, Kimberly Ward-Duong, William Januszewski, Barnaby Norris, Peter Tuthill, Nienke Van Der Marel, Michael Sitko, Vincent Deo, Sebastien Vievard, Nemanja Jovanovic, Frantz Martinache

Astronomy: Faculty Publications

Direct images of protoplanets embedded in disks around infant stars provide the key to understanding the formation of gas giant planets such as Jupiter. Using the Subaru Telescope and the Hubble Space Telescope, we find evidence for a Jovian protoplanet around AB Aurigae orbiting at a wide projected separation (~93 au), probably responsible for multiple planet-induced features in the disk. Its emission is reproducible as reprocessed radiation from an embedded protoplanet. We also identify two structures located at 430–580 au that are candidate sites of planet formation. These data reveal planet formation in the embedded phase and a protoplanet discovery …

Isolation And Genome Analysis Of An Amoeba-Associated Bacterium Dyella Terrae Strain Ely Copper Mine From Acid Rock Drainage In Vermont, United States, Lesley Ann Giddings, Kevin Kunstman, Bouziane Moumen, Laurent Asiama, Stefan Green, Vincent Delafont, Matthew Brockley, Ascel Samba-Louaka

Chemistry: Faculty Publications

Protozoa play important roles in microbial communities, regulating populations via predation and contributing to nutrient cycling. While amoebae have been identified in acid rock drainage (ARD) systems, our understanding of their symbioses in these extreme environments is limited. Here, we report the first isolation of the amoeba Stemonitis from an ARD environment as well as the genome sequence and annotation of an associated bacterium, Dyella terrae strain Ely Copper Mine, from Ely Brook at the Ely Copper Mine Superfund site in Vershire, Vermont, United States. Fluorescent in situ hybridization analysis showed this bacterium colonizing cells of Stemonitis sp. in addition …

A Systematic Literature Review Of Requirements Engineering Education, Marian Daun, Alicia M. Grubb, Viktoria Stenkova, Bastian Tenbergen

Computer Science: Faculty Publications

Requirements engineering (RE) has established itself as a core software engineering discipline. It is well acknowledged that good RE leads to higher quality software and considerably reduces the risk of failure or budget-overspending of software development projects. It is of vital importance to train future software engineers in RE and educate future requirements engineers to adequately manage requirements in various projects. To this date, there exists no central concept of what RE education shall comprise. To lay a foundation, we report on a systematic literature review of the feld and provide a systematic map describing the current state of RE …

Alma Discovery Of A Disk Around The Planetary-Mass Companion Sr 12 C, Ya Lin Wu, Brendan P. Bowler, Patrick D. Sheehan, Laird M. Close, Joshua A. Eisner, William M.J. Best, Kimberly Ward-Duong, Zhaohuan Zhu, Adam L. Kraus

Astronomy: Faculty Publications

We report an Atacama Large Millimeter/submillimeter Array 0.88 mm (Band 7) continuum detection of the accretion disk around SR 12 c, an ∼11 M Jup planetary-mass companion (PMC) orbiting its host binary at 980 au. This is the first submillimeter detection of a circumplanetary disk around a wide PMC. The disk has a flux density of 127 ± 14 μJy and is not resolved by the ∼0.″1 beam, so the dust disk radius is likely less than 5 au and can be much smaller if the dust continuum is optically thick. If, however, the dust emission is optically thin, then …

The Dense Gas Mass Fraction And The Relationship To Star Formation In M51, Mark Heyer, Benjamin Gregg, Daniela Calzetti, Bruce G. Elmegreen, Robert Kennicutt, Angela Adamo, Aaron S. Evans, Kathryn Grasha, James D. Lowenthal, Gopal Narayanan, Daniel Rosa-Gonzalez, F. P. Schloerb, Kamal Souccar, Yuping Tang, Peter Teuben, Olga Vega, William F. Wall, Min S. Yun

Astronomy: Faculty Publications

Observations of 12CO J = 1 - 0 and HCN J = 1 - 0 emission from NGC 5194 (M51) made with the 50 m Large Millimeter Telescope and the SEQUOIA focal plane array are presented. Using the HCN-to-CO ratio, we examine the dense gas mass fraction over a range of environmental conditions within the galaxy. Within the disk, the dense gas mass fraction varies along the spiral arms but the average value over all spiral arms is comparable to the mean value of interarm regions. We suggest that the near-constant dense gas mass fraction throughout the disk arises from …

Auxetic Interval Determination And Experimental Validation For A Three-Dimensional Periodic Framework, Ciprian S. Borcea, Freek G.J. Broeren, Just L. Herder, Ileana Streinu, Volkert Van Der Wijk

Computer Science: Faculty Publications

Auxetic behavior refers to lateral widening upon stretching or, in reverse, lateral shrinking upon compression. When an initially auxetic structure is actuated by compression or extension, it will not necessarily remain auxetic for larger deformations. In this paper, we investigate the auxetic range in the deformation of a periodic framework with one degree of freedom. We use geometric criteria to identify the interval where the deformation is auxetic and validate these theoretical findings with compression experiments on sample structures with (Formula presented.) unit cells.

Meeting U.S. Greenhouse Gas Emissions Goals With The International Air Pollution Provision Of The Clean Air Act, Mei Yuan, Alexander R. Barron, Noelle E. Selin, Paul D. Picciano, Lucy E. Metz, John M. Reilly, Henry D. Jacoby

Environmental Science and Policy: Faculty Publications

We explore economic, distributional and health consequences of U.S. greenhouse gas emissions objectives that could be achieved using Section 115 of the Clean Air Act (international air pollution), which has only recently received detailed legal analysis as a potential U.S. climate policy tool. Under it a national emissions target could be allocated among the states. This illustrative analysis considers 45% and 50% reductions of energy and industry-related CO2 emissions by 2030, below 2005 levels, via a model rule. Different approaches (based on legal precedent) for the interstate allocation are considered, along with alternative rates of technology improvement. The detail needed …

An Educator’S Perspective Of The Tidyverse, Mine Çetinkaya-Rundel, Johanna Hardin, Benjamin Baumer, Amelia Mcnamara, Nicholas J. Horton, Colin W. Rundel

Statistical and Data Sciences: Faculty Publications

Computing makes up a large and growing component of data science and statistics courses. Many of those courses, especially when taught by faculty who are statisticians by training, teach R as the programming language. A number of instructors have opted to build much of their teaching around use of the tidyverse. The tidyverse, in the words of its developers, “is a collection of R packages that share a high-level design philosophy and low-level grammar and data structures, so that learning one package makes it easier to learn the next” (Wickham et al. 2019). These shared principles have led to the …