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Full-Text Articles in Physical Sciences and Mathematics

Acoustic Signatures Of Habitat Types In The Miombo Woodlands Of Western Tanzania, Sheryl Vanessa Amorocho, Dante Francomano, Kristen M. Bellisario, Ben Gottesman, Bryan C. Pijanowski Aug 2017

Acoustic Signatures Of Habitat Types In The Miombo Woodlands Of Western Tanzania, Sheryl Vanessa Amorocho, Dante Francomano, Kristen M. Bellisario, Ben Gottesman, Bryan C. Pijanowski

The Summer Undergraduate Research Fellowship (SURF) Symposium

The Miombo Woodlands of Tanzania comprise several habitat types that are home to a great number of flora and fauna. Understanding their responses to increasing human disturbance is important for conservation, especially in places where people depend so directly on their local ecosystem services to survive. Soundscapes are a powerful approach to study complex biomes undergoing change. The sounds emitted by soniferous fauna characterize the acoustic profile of the landscapes they inhabit such that habitats with the highest acoustic abundance are considered as the most diverse and possibly more ecologically resilient. However, acoustic variability within similar habitat types may pose …


How Strongly Do Oysters Stick?, Nicolás M. Morato, Andrés M. Tibabuzo, Jonathan J. Wilker Aug 2017

How Strongly Do Oysters Stick?, Nicolás M. Morato, Andrés M. Tibabuzo, Jonathan J. Wilker

The Summer Undergraduate Research Fellowship (SURF) Symposium

Biological adhesives are a type of interfacial material that has incredible potential to generate new biomimetic compounds that can replace current strong, but toxic, adhesives. Therefore, a study of the chemical composition and mechanical properties of those bio-adhesives is necessary. However, in the case of oysters, despite known chemical characterization of the adult’s adhesive, there are almost no studies on its mechanical properties. Furthermore, there is no available information on the adhesive properties of spat (oysters in their larvae state). Herein, we present the first mechanical characterization of the spat adhesive, measuring its adhesion strength by hydrodynamic determination using a …


Mobility Characteristics Of Azithromycin In Soil, Ryan Minter, Jihyun Kim, Linda Lee Aug 2017

Mobility Characteristics Of Azithromycin In Soil, Ryan Minter, Jihyun Kim, Linda Lee

The Summer Undergraduate Research Fellowship (SURF) Symposium

The presence of pharmaceutical and personal care products (PPCPs) in the environment has become a widespread problem in recent decades. Azithromycin, a macrolide antibiotic commonly prescribed for infections in humans, has been detected in waste treatment plant discharge and surface waters across the world. Data on the mobility characteristics of azithromycin in soil is scarce, and further studies must be performed to explore the potential for azithromycin leaching to groundwater or becoming available for plant uptake. In this study, azithromycin sorption isotherms were measured on eight soils varying in pH, organic carbon content, and clay content. Soil was equilibrated with …


Predictive Power And Validity Of Connectome Predictive Modeling: A Replication And Extension, Michael Wang, Joaquin Goni, Enrico Amico Aug 2017

Predictive Power And Validity Of Connectome Predictive Modeling: A Replication And Extension, Michael Wang, Joaquin Goni, Enrico Amico

The Summer Undergraduate Research Fellowship (SURF) Symposium

Neuroimaging, particularly functional magnetic resonance imaging (fMRI), is a rapidly growing research area and has applications ranging from disease classification to understanding neural development. With new advancements in imaging technology, researchers must employ new techniques to accommodate the influx of high resolution data sets. Here, we replicate a new technique: connectome-based predictive modeling (CPM), which constructs a linear predictive model of brain connectivity and behavior. CPM’s advantages over classic machine learning techniques include its relative ease of implementation and transparency compared to “black box” opaqueness and complexity. Is this method efficient, powerful, and reliable in the prediction of behavioral measures …


Can Cone Signals In The Wild Be Predicted From The Past?, David H. Foster, Iván Marín-Franch May 2017

Can Cone Signals In The Wild Be Predicted From The Past?, David H. Foster, Iván Marín-Franch

MODVIS Workshop

In the natural world, the past is usually a good guide to the future. If light from the sun and sky is blue earlier in the day and yellow now, then it is likely to be more yellow later, as the sun's elevation decreases. But is the light reflected from a scene into the eye as predictable as the light incident upon the scene, especially when lighting changes are not just spectral but include changes in local shadows and mutual reflections? The aim of this work was to test the predictability of cone photoreceptor signals in the wild over the …


Role Of The Cost Of Plasticity In Determining The Features Of Fast Vision In Humans., Maria M. Del Viva Phd, Renato Budinich M. Sc, Laura Palmieri M. Sc, Vladimir S Georgiev Phd, Giovanni Punzi Phd May 2017

Role Of The Cost Of Plasticity In Determining The Features Of Fast Vision In Humans., Maria M. Del Viva Phd, Renato Budinich M. Sc, Laura Palmieri M. Sc, Vladimir S Georgiev Phd, Giovanni Punzi Phd

MODVIS Workshop

No abstract provided.


Prediction Of Local Quality Of Protein Structure Models Considering Spatial Neighbors In Graphical Models., Woong Hee Shin, Xuejiao Kang, Jian Zhang, Daisuke Kihara Jan 2017

Prediction Of Local Quality Of Protein Structure Models Considering Spatial Neighbors In Graphical Models., Woong Hee Shin, Xuejiao Kang, Jian Zhang, Daisuke Kihara

Department of Biological Sciences Faculty Publications

Protein tertiary structure prediction methods have matured in recent years. However, some proteins defy accurate prediction due to factors such as inadequate template structures. While existing model quality assessment methods predict global model quality relatively well, there is substantial room for improvement in local quality assessment, i.e. assessment of the error at each residue position in a model. Local quality is a very important information for practical applications of structure models such as interpreting/designing site-directed mutagenesis of proteins. We have developed a novel local quality assessment method for protein tertiary structure models. The method, named Graph-based Model Quality assessment method …