Open Access. Powered by Scholars. Published by Universities.®

Physical Sciences and Mathematics Commons

Open Access. Powered by Scholars. Published by Universities.®

PDF

Portland State University

Theses/Dissertations

2015

Chemical reactions -- Simulation methods

Articles 1 - 1 of 1

Full-Text Articles in Physical Sciences and Mathematics

Novel Methods For Learning And Adaptation In Chemical Reaction Networks, Peter Banda Jun 2015

Novel Methods For Learning And Adaptation In Chemical Reaction Networks, Peter Banda

Dissertations and Theses

State-of-the-art biochemical systems for medical applications and chemical computing are application-specific and cannot be re-programmed or trained once fabricated. The implementation of adaptive biochemical systems that would offer flexibility through programmability and autonomous adaptation faces major challenges because of the large number of required chemical species as well as the timing-sensitive feedback loops required for learning. Currently, biochemistry lacks a systems vision on how the user-level programming interface and abstraction with a subsequent translation to chemistry should look like. By developing adaptation in chemistry, we could replace multiple hard-wired systems with a single programmable template that can be (re)trained to …