Physical Sciences and Mathematics Commons^™

Methods For Drone Trajectory Analysis Of Bottlenose Dolphins (Tursiops Truncatus), Jillian D. Bliss

Theses and Dissertations

With the increase in the use of UAS (Unmanned Aerial Systems) for marine mammal research, there is a need for the development of methods of analysis to transform UAS high resolution video into quantitative data. This study sought to develop a preliminary method of analysis that would quantify and present a way to visualize the dynamics and relative spatial distribution and changes in distribution of bottlenose dolphins (Tursiops truncatus) in the waters of Turneffe Atoll, Belize. This approach employs a previously developed video tracking program ‘Keypoint Tracking’ that enables manual tracking of individual dolphins and the creation of …

To Destroy Or Transform? Two Fossil Fuel Transitions Offer Glimpse Into Industry’S Future, Chloe Bennett, Sarah Kerson

Capstones

In 2019, the Philadelphia Energy Solutions oil refinery closed after a dangerous explosion. But for years before the accident, members of the local environmental justice organization Philly Thrive had been advocating for its closure. Neighborhood residents who live near the refinery site had been complaining for years of health problems, ranging from asthma to cancer. “Enough is enough,” says Sylvia Bennett, 79, who lives in the Grays Ferry neighborhood near where the refinery is located. Her two daughters have both been diagnosed with cancer.

What will become of the refinery site remains to be seen as conversations between Hilco and …

Secondhand Shopping Is Now The Coolest Way To Get Your Clothes, Camryn Quick

Capstones

Shopping secondhand has experienced an uptick in popularity in the past few years. There are a few reasons for this, all of which are examined in the project. One reason for the increase in secondhand shoppers is the daunting news about the state of our environment. Another reason, perhaps even more powerful than the fear of environmental collapse, is that thrifting has become a fashion phenomenon showcased and distributed throughout social media apps like TikTok. Essentially, shopping secondhand has become cool. This project explores these driving forces behind the thrifting boom, as well as the possible impacts, including "thrift store …

Scientists And Activists Work To Save The Planet, Myriam G. Vidal Valero

Capstones

Climate change and human intervention in nature are affecting people, ecosystems and ways of living all over the world. This portfolio of environmental pieces showcases the dire consequences of not addressing these issues, how solutions can be reached and the challenges facing those who try to change things.

Nmr Characterization Of Novel Materials For Battery Electrolyte Applications, Sahana Bhattacharyya

Dissertations, Theses, and Capstone Projects

The extensive application of renewable and non-renewable energy storage devices in commercial products and services and the global warming have created significant motivations to accelerate research in battery technology. In addition, the risk factors generated by the high heat generation and flammability of the batteries are being addressed by inventing new renewable or non-renewable energy resources that do not release greenhouse gases into the atmosphere. This thesis discusses the applications of Nuclear Magnetic Resonance (NMR) Spectroscopy in characterizing and understanding novel battery materials as potential battery electrolytes. Works discussed include: the variable temperature characterization of water-based solid polymer electrolyte for …

Driven Dipolaritons In Van Der Waals Transition Metal Dichalcogenide Heterostructures: Properties And Applications, Patrick Serafin

Dissertations, Theses, and Capstone Projects

The need for advances in optical computation leads us toward the investigation of novel methods of re-routing light in optical circuits. The behavior and properties of electrically driven exciton-dipolaritons in van der Waals transition metal dichalcogenides are investigated as a platform for realizing working elements of a polaritronic transistor. In this work, we consider exciton-dipolaritons, which are three-way superposition of cavity photons, direct excitons, and indirect excitons in a bilayer semiconducting system embedded in an optical microcavity. We start by providing motivation for our study of polaritons and then survey the fundamental properties of exciton-dipolaritons. We also survey the basic …

Control Of Nonlinear Properties Of Van Der Waals Materials, Rezlind Bushati

Dissertations, Theses, and Capstone Projects

Van der Waals materials are a broad class of materials that exhibit unique optoelectronic properties. They provide a rich playground for which they can be integrated into current on-chip devices due to their nanometer-scale size, and be utilized for studying fundamental physics. Strong coupling of emitters to microcavities provides many opportunities for new exotic physics through the formation of hybrid quasi-particles exciton-polaritons. This thesis
focuses on exploring and enhancing nonlinearity of van der Waals materials through strongly coupling to microcavities. By taking advantage of the stacking order of TMDs, we show intense second-harmonic generation from bulk, centrosymmetric TMD systems. In …

On The Cryptographic Deniability Of The Signal Protocol, Nihal Vatandas

Dissertations, Theses, and Capstone Projects

Offline deniability is the ability to a posteriori deny having participated in a particular communication session. This property has been widely assumed for the Signal messaging application, yet no formal proof has appeared in the literature. In this work, we present the first formal study of the offline deniability of the Signal protocol. Our analysis shows that building a deniability proof for Signal is non-trivial and requires strong assumptions on the underlying mathematical groups where the protocol is run.

To do so, we study various implicitly authenticated key exchange protocols, including MQV, HMQV, and 3DH/X3DH, the latter being the core …

Stability Of Two-Dimensional Magnetic Skyrmions, Amel Derras-Chouk

Dissertations, Theses, and Capstone Projects

Magnetic skyrmions are whirls formed by magnetic moments in a crystal. They have attracted attention largely due to their topological protection, which provides an avenue for technology like next-generation memory storage. The idea of topologically protected solutions of a quantum field theory was originally proposed by Tony Skyrme when he developed a model to explain the stability of hadrons in particle physics. His work has extended far beyond his original intent to several areas of condensed matter physics. Here we focus on skyrmions in magnetic materials.

Skyrme's original theory modeled excitations which exist in three spatial dimensions, a requirement for …

Using Protonation Microstates And Hydrogen Bond Networks To Track Proton Transfer Pathways In Complex I, Umesh Khaniya

Dissertations, Theses, and Capstone Projects

Complex I, NADH-ubiquinone oxidoreductase, is the first enzyme in the mitochondrial and bacterial aerobic respiratory chain. It pumps four protons through four transiently open pathways from the high pH, negative, N- side of the membrane to the positive, P-side driven by the exergonic transfer of electrons from NADH to a quinone. Three protons transfer through subunits descended from Mrp antiporters, while the fourth, E-channel is unique. Because of the complex possible paths thorough the many buried polar residues and lack of high-resolution crystal structure, the path for protons through the E-channel is elusive.

In this dissertation, the E-channel proton pumping …

Stacking The Gamma-Ray Sky To Search For Faint Astrophysical Populations, Yuzhe Song

Dissertations, Theses, and Capstone Projects

Gamma-ray emission can be generated from a wide variety of high-energy astrophysical phenomena, from stellar flares to pulsating neutron stars, and from interstellar clouds to the center of the Milky Way Galaxy. Entering the 13th year of its orbit around Earth, the Fermi Space Gamma-ray Telescope has been continually surveying the γ-ray sky with its Large Area Telescope (LAT) on board. The latest Fermi source catalog contains over 6000 sources. Yet, a lot of sources that are expected to emit γ-rays are not detected, and only small percentages of some populations are detected. For example, solar flares are detected in …

The Microscopical Evidence Traces Analysis Of Household Dust And Its Statistical Significance As A Definitive Identification Technique, Stephanie Polifroni

Dissertations, Theses, and Capstone Projects

Evidence found at crime scenes is used to assist in creating a link the suspect, the victim, and the scene. As stated by the Locard’s Principle, every contact leaves a trace, that evidence can be used to link together an investigation. Traces are collected in hopes that they can be identified and associated to an individual or individuals to help solve that particular crime. However, the strongest conclusion for evidence traces is an association to a source, and unless a physical match of some kind is found, an individualization cannot be established even when known sample is available. However, having …

Visible Light Photocatalysis Of Organic Reactions In H2o, Sankarsan Biswas

Dissertations, Theses, and Capstone Projects

Visible-light photocatalysis in H₂O provides an attractive, green alternative to typical organic synthesis, which often involves toxic solvents, metal catalysts, and large energy demands. Hence, there is a growing need for an efficient photocatalytic methods that use either aqueous media as a solvent or can proceed solvent-free. However, commercially available photocatalysts do not work well for aqueous photocatalysis. Supramolecular systems in particular have been explored recently to address these issues associated with aqueous photocatalysis. Chapter 1 will review recent advances in aqueous supramolecular photocatalysis with examples of different supramolecular systems and how they have addressed some of the …

Data-Centric Machine Learning For Speech And Audio, Ali Raza Syed

Dissertations, Theses, and Capstone Projects

There is growing recognition of the importance of data-centric methods for building machine learning systems. Data-centric methods assume a fixed model and iterate over the data to improve system performance. This is in contrast to traditional model-centric approaches, which assume a fixed dataset and iterate over models for the same ends. Data-centric machine learning is driven by the observation that, beyond the size of the training data, model performance depends on factors such as the quality of the annotations, and whether the data are representative of conditions in which models will be deployed. This is particularly of interest in the …

Engineering Rare-Earth Based Color Centers In Wide Bandgap Semiconductors For Quantum And Nanoscale Applications, Gabriel I. López-Morales

Dissertations, Theses, and Capstone Projects

For many years, atomic point-defects have been readily used to tune the bulk properties of solid-state crystalline materials, for instance, through the inclusion of elemental impurities (doping) during growth, or post-processing treatments such as ion bombardment or high-energy irradiation. Such atomic point-defects introduce local ‘incompatible’ chemical interactions with the periodic atomic arrangement that makes up the crystal, resulting for example in localized electronic states due to dangling bonds or excess of electrons. When present in sufficient concentrations, the defects interact collectively to alter the overall bulk properties of the host material. In the low concentration limit, however, point-defects can serve …

Witness-Authenticated Key Exchange, Kelsey G. Melissaris

Dissertations, Theses, and Capstone Projects

In this dissertation we investigate Witness-Authenticated Key Exchange (WAKE), a key agreement protocol in which each party is authenticated through knowledge of a witness to an arbitrary NP statement. We provide both game-based and universally composable definitions. Thereby, this thesis presents solutions for the most flexible and general method of authentication for group key exchange, providing simple constructions from (succinct) signatures of knowledge (SOK) and a two round UC-secure protocol.

After a discussion of flaws in previous definitions for WAKE we supply a new and improved game-based definition along with the first definition for witness-authenticated key exchange between groups of …

Finite Gaussian Neurons: Defending Against Adversarial Attacks By Making Neural Networks Say "I Don’T Know", Felix Grezes

Dissertations, Theses, and Capstone Projects

In this work, I introduce the Finite Gaussian Neuron (FGN), a novel neuron architecture for artificial neural networks aimed at protecting against adversarial attacks.
Since 2014, artificial neural networks have been known to be vulnerable to adversarial attacks, which can fool the network into producing wrong or nonsensical outputs by making humanly imperceptible alterations to inputs. While defenses against adversarial attacks have been proposed, they usually involve retraining a new neural network from scratch, a costly task.

My works aims to:
- easily convert existing models to Finite Gaussian Neuron architecture,
- while preserving the existing model's behavior on real …

Astrophysics, Cosmology And Particle Phenomenology At The Energy Frontier, Jorge Fernandez Soriano

Dissertations, Theses, and Capstone Projects

This dissertation consists of two parts, treating significantly separated fields. Each part consists on several chapters, each treating a somewhat isolated topic from the rest. In each chapter, I present some of the work developed during my passage through the graduate program, which has mostly been published elsewhere.

Part I – Cosmic Rays and Particle Physics

• Chapter 1: In this chapter we present an introduction to the topic of cosmic ray physics, with an special focus on the so-called ultra high energy cosmic rays: their potential origins, effects during their propagation between their sources and Earth, the different techniques used …

Towards Explaining Variation In Entrainment, Andreas Weise

Dissertations, Theses, and Capstone Projects

Entrainment refers to the tendency of human speakers to adapt to their interlocutors to become more similar to them. This affects various dimensions and occurs in many contexts, allowing for rich applications in human-computer interaction. However, it is not exhibited by every speaker in every conversation but varies widely across features, speakers, and contexts, hindering broad application. This variation, whose guiding principles are poorly understood even after decades of entrainment research, is the subject of this thesis. We begin with a comprehensive literature review that serves as the foundation of our own work and provides a reference to guide future …

Asymptotic Classes, Pseudofinite Cardinality And Dimension, Alexander Van Abel

Dissertations, Theses, and Capstone Projects

We explore the consequences of various model-theoretic tameness conditions upon the behavior of pseudofinite cardinality and dimension. We show that for pseudofinite theories which are either Morley Rank 1 or uncountably categorical, pseudofinite cardinality in ultraproducts satisfying such theories is highly well-behaved. On the other hand, it has been shown that pseudofinite dimension is not necessarily well-behaved in all ultraproducts of theories which are simple or supersimple; we extend such an observation by constructing simple and supersimple theories in which pseudofinite dimension is necessarily ill-behaved in all such ultraproducts. Additionally, we have novel results connecting various forms of asymptotic classes …

Dynamics Of Cubic Rational Maps Under Certain Constraints On Critical Points, Arkady Etkin

Dissertations, Theses, and Capstone Projects

There is a neat dichotomy for the Julia sets of quadratic rational maps; that is, they are either connected or a Cantor set. In contrast to the quadratic case, the Julia sets of rational maps of of degree ≥ 3 have more variations. In this project, we study the Julia sets of cubic rational maps under some constraints. We first extend the Julia set dichotomy to the cubic rational maps with all critical points escaping to an attracting fixed point. Then we consider two more classes of cubic rational maps: one class consists of the cubic rational maps with two …

Nutrient Dynamics And Ecosystem Development Of Urban Forests, Gisselle A. Mejía

Dissertations, Theses, and Capstone Projects

Urban growth and expansion are a major component of global environmental change, with impacts on climate, air and water quality, biodiversity, and human well-being. Forests embedded in urban landscapes are critical in mitigating these impacts at local, regional, and continental scales. However, assessing urban forests is difficult because cities are heterogenous in physical, chemical, biological, and social dimensions. This heterogeneity has constrained how urban forests are defined, and therefore, how they are studied. The objective of this dissertation is to determine how these biophysical and social factors drive ecological processes in urban forests and will address three outstanding challenges in …

Grammar Competition Explored In Two Case Studies: The Null Subject Stage In English-Speaking Children And The Variation Observed In Old English, Soumik Dey

Dissertations, Theses, and Capstone Projects

Grammar competition theory postulates that variation in a speaker is the result of different grammars competing against each other. This study performs an analysis of two case studies of empirical observations attributed to possible grammar competition — subject drop in English-speaking children and variation observed in Old English.

Children in an English-speaking environment drop subjects early on during acquisition. Orfitelli and Hyams (2012) find that young English-speaking children mistakenly interpret imperative null subject utterances as declaratives. They suggest that this misinterpretation can be attributed to performance factors, which leads to grammar competition and subsequently subject drop in English children. We …

Growth, Optimization, And Characterization Of Topological Insulator Nanostructures By Molecular Beam Epitaxy, Ido Levy

Dissertations, Theses, and Capstone Projects

Topological insulators (TIs) have been the subject of much research since their discovery in 2009. The unique band structure of the TIs makes them attractive in research of exotic physical phenomena, such as the realization of the quantum anomalous Hall effect, as well as novel applications, including quantum computing, spintronics, and more. From a crystal growth perspective, their van-der-Waals structure also provides new opportunities, for example, by enabling the growth on a large selection of substrates. This thesis presents the growth of three-dimensional TI layers, heterostructures and magnetic TIs by molecular beam epitaxy (MBE). First, we show the improvement of …

An Analysis Of The Friendship Paradox And Derived Sampling Methods, Yitzchak Novick

Dissertations, Theses, and Capstone Projects

The friendship paradox (FP) is the famous sampling-bias phenomenon that leads to the seemingly paradoxical truth that, on average, people’s friends have more friends than they do. Among the many far-reaching research findings the FP inspired is a sampling method that samples neighbors of vertices in a graph in order to acquire random vertices that are of higher expected degree than average.

Our research examines the friendship paradox on a local level. We seek to quantify the impact of the FP on an individual vertex by defining the vertex’s “friendship index”, a measure of the extent to which the phenomenon …

The Separation Of Charm And Bottom Decays Measured In P+Au Collisions At 200 Gev, Zhiyan Wang

Dissertations, Theses, and Capstone Projects

It has long been observed experimentally, from previous heavy-flavor electron measurements, that heavy quarks are subject to substantial modifications of their momentum spectrum. Using the PHENIX detector at the Relativistic Heavy Ion Collider (RHIC), measurements of the production of open heavy flavor hadrons with charm and bottom quarks in p+Au collisions at 200 GeV are studied and presented in this thesis. Distance of closest approach analysis of electron tracks is used to study the semileptonic decay electrons from charm and bottom hadrons. The results include invariant yield and fraction of bottom electrons. In addition to the p+p and Au+Au collisions’ …

Sensitized Photooxidation Of Prenylated Compounds: Mechanisms Of Downstream Dark Effects And Phototoxicity Priming, Shakeela Jabeen

Dissertations, Theses, and Capstone Projects

This thesis consists of four chapters as detailed below.

Chapter 1 discusses a singlet oxygen priming mechanism. Airborne singlet oxygen derived from photosensitization of triplet dioxygen is shown to react with an alkene surfactant (8-methylnon-7-ene-1 sulfonate) leading to ‘ene’ hydroperoxides that in the dark inactivate planktonic E. coli. The ‘ene’ hydroperoxide photoproducts are not toxic on their own, but they become toxic after the bacteria are pretreated with singlet oxygen. The total quenching rate constant (k_T) of singlet oxygen of the alkene surfactant was measured to be 1.1 × 10⁶ M⁻¹ s^{− …}

Influence Level Prediction On Social Media Through Multi-Task And Sociolinguistic User Characteristics Modeling, Denys Katerenchuk

Dissertations, Theses, and Capstone Projects

Prediction of a user’s influence level on social networks has attracted a lot of attention as human interactions move online. Influential users have the ability to influence others’ behavior to achieve their own agenda. As a result, predicting users’ level of influence online can help to understand social networks, forecast trends, prevent misinformation, etc. The research on user influence in social networks has attracted much attention across multiple disciplines, from social sciences to mathematics, yet it is still not well understood. One of the difficulties is that the definition of influence is specific to a particular problem or a domain, …

Electron Transport In Quantum Systems With Interaction, Sara Abedi

Dissertations, Theses, and Capstone Projects

No abstract provided.

Conformation Of The U12-U6atac Snrna Complex Of The Minor Spliceosome And Binding By Ntc-Related Protein Rbm22, Joanna Ciavarella

Dissertations, Theses, and Capstone Projects

Splicing of precursor messenger (pre-m)RNA is a critical process in eukaryotes in which the non-coding regions, called introns, are removed and coding regions, or exons, are ligated to form a mature mRNA. This process is catalyzed by the spliceosome, a multi-mega Dalton ribonucleoprotein complex assembled from five small nuclear ribonucleoproteins (snRNP) in the form of small nuclear (sn)RNA-protein complexes (U1, U2, U4, U5 and U6) and >100 proteins. snRNA components catalyze the two transesterification reactions while proteins perform critical roles in assembly and rearrangement. U2 and U6 snRNAs are the only snRNAs directly implicated in catalyzing the splicing of pre-mRNA. …