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Full-Text Articles in Physical Sciences and Mathematics

Soil Bacteria In Urban Community Gardens Have The Potential To Disseminate Antimicrobial Resistance Through Horizontal Gene Transfer, Abdullah Ibn Mafiz, Yingshu He, Wei Zhang, Yifan Zhang Nov 2021

Soil Bacteria In Urban Community Gardens Have The Potential To Disseminate Antimicrobial Resistance Through Horizontal Gene Transfer, Abdullah Ibn Mafiz, Yingshu He, Wei Zhang, Yifan Zhang

Agricultural and Environmental Sciences Faculty Research

Fifteen soil and 45 vegetable samples from Detroit community gardens were analyzed for potential antimicrobial resistance contamination. Soil bacteria were isolated and tested by antimicrobial susceptibility profiling, horizontal gene transfer, and whole-genome sequencing. High-throughput 16S rRNA sequencing analysis was conducted on collected soil samples to determine the total bacterial composition. Of 226 bacterial isolates recovered, 54 were from soil and 172 from vegetables. A high minimal inhibitory concentration (MIC) was defined as the MIC greater than or equal to the resistance breakpoint of Escherichia coli for Gram-negative bacteria or Staphylococcus aureus for Gram-positive bacteria. The high MIC was observed in …


Assessing The Impact Of Organic Versus Conventional Agricultural Management On Soil Hydraulic Properties In A Long-Term Experiment, Abdelrahman Alfahham, Matthew T. Amato, Emmanuel Omondi, Daniel Giménez, Alain F. Plante Jul 2021

Assessing The Impact Of Organic Versus Conventional Agricultural Management On Soil Hydraulic Properties In A Long-Term Experiment, Abdelrahman Alfahham, Matthew T. Amato, Emmanuel Omondi, Daniel Giménez, Alain F. Plante

Agricultural and Environmental Sciences Faculty Research

Investigating the effects of various agricultural management systems on soil hydraulic properties in long-term field experiments allows farmers to evaluate their efficacy in mitigating the effects of droughts and floods, which are expected to intensify in the coming decades. This study's main objective was to quantify soil structural and hydraulic properties in plots under organic manure, organic leguminous, and conventional agricultural management and related tillage practices at Rodale Institute's Farming Systems Trial. Soil cores were collected at depths of 0–10, 10–20, and 20–30 cm and analyzed for soil water retention, saturated hydraulic conductivity (Ksat), soil organic C (SOC), bulk density, …


Can Agricultural Management Induced Changes In Soil Organic Carbon Be Detected Using Mid-Infrared Spectroscopy?, Jonathan Sanderman, Kathleen Savage, Shree R.S. Dangal, Gabriel Duran, Charlotte Rivard, Michel A. Cavigelli, Hero T. Gollany, Virginia L. Jin, Mark A. Liebig, Emmanuel Chiwo Omondi, Yichao Rui, Catherine Stewart Jun 2021

Can Agricultural Management Induced Changes In Soil Organic Carbon Be Detected Using Mid-Infrared Spectroscopy?, Jonathan Sanderman, Kathleen Savage, Shree R.S. Dangal, Gabriel Duran, Charlotte Rivard, Michel A. Cavigelli, Hero T. Gollany, Virginia L. Jin, Mark A. Liebig, Emmanuel Chiwo Omondi, Yichao Rui, Catherine Stewart

Agricultural and Environmental Sciences Faculty Research

A major limitation to building credible soil carbon sequestration programs is the cost of measuring soil carbon change. Diffuse reflectance spectroscopy (DRS) is considered a viable low-cost alternative to traditional laboratory analysis of soil organic carbon (SOC). While numerous studies have shown that DRS can produce accurate and precise estimates of SOC across landscapes, whether DRS can detect subtle management induced changes in SOC at a given site has not been resolved. Here, we leverage archived soil samples from seven long-term research trials in the U.S. to test this question using mid infrared (MIR) spectroscopy coupled with the USDA-NRCS Kellogg …


Soil Extracellular Oxidases Mediated Nitrogen Fertilization Effects On Soil Organic Carbon Sequestration In Bioenergy Croplands, Jianjun Duan, Min Yuan, Siyang Jian, Lahiru Gamage, Madhav Parajuli, Kudjo E. Dzantor, Dafeng Hui, Philip A. Fay, Jianwei Li May 2021

Soil Extracellular Oxidases Mediated Nitrogen Fertilization Effects On Soil Organic Carbon Sequestration In Bioenergy Croplands, Jianjun Duan, Min Yuan, Siyang Jian, Lahiru Gamage, Madhav Parajuli, Kudjo E. Dzantor, Dafeng Hui, Philip A. Fay, Jianwei Li

Agricultural and Environmental Sciences Faculty Research

Nitrogen (N) fertilization significantly affects soil extracellular oxidases, agents responsible for decomposition of slow turnover and recalcitrant soil organic carbon (SOC; e.g., lignin), and consequently influences soil carbon sequestration capacity. However, it remains unclear how soil oxidases mediate SOC sequestration under N fertilization, and whether these effects co-vary with plant type (e.g., bioenergy crop species). Using a spatially explicit design and intensive soil sampling strategy under three fertilization treatments in switchgrass (SG: Panicum virgatum L.) and gamagrass (GG: Tripsacum dactyloides L.) croplands, we quantified the activities of polyphenolic oxidase (PHO), peroxidase (PER), and their sum associated with recalcitrant C acquisition …


Antimony (V) Adsorption At The Hematite–Water Interface: A Macroscopic And In Situ Atr-Ftir Study, Jerzy Mierzwa, Rose Mumbi, Avedananda Ray, Sudipta Rakshit, Michael E. Essington, Dibyendu Sarkar Mar 2021

Antimony (V) Adsorption At The Hematite–Water Interface: A Macroscopic And In Situ Atr-Ftir Study, Jerzy Mierzwa, Rose Mumbi, Avedananda Ray, Sudipta Rakshit, Michael E. Essington, Dibyendu Sarkar

Agricultural and Environmental Sciences Faculty Research

The environmental mobility of antimony (Sb) is largely unexplored in geochemical environments. Iron oxide minerals are considered major sinks for Sb. Among the different oxidation states of Sb, (+) V is found more commonly in a wide redox range. Despite many adsorption studies of Sb (V) with various iron oxide minerals, detailed research on the adsorption mechanism of Sb (V) on hematite using macroscopic, spectroscopic, and surface complexation modeling is rare. Thus, the main objective of our study is to evaluate the surface complexation mechanism of Sb (V) on hematite under a range of solution properties using macroscopic, in situ …