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Physics

Portland State University

Crystallography -- Databases

Articles 1 - 3 of 3

Full-Text Articles in Physical Sciences and Mathematics

Open-Access Crystallography Database Administration: Preparation And Upload Of 400 Structures, Justin Shuck Oct 2014

Open-Access Crystallography Database Administration: Preparation And Upload Of 400 Structures, Justin Shuck

PSU McNair Scholars Online Journal

Since 2004, Portland State's Nano-Crystallography Group has provided crystallographic resources including five interactive open-access databases (educational subset of the Crystallographic Open Database (COD), Crystal Morphology Database, Nano-Crystallography Database and Wiki Crystallography Database) as well as a mirror to the whole COD, which is the world's largest openaccess crystallography database (with currently over 235 thousand data entries of inorganic, organic, and metal-organic compounds as well as minerals). Before information can be stored inside of databases they must be put in Crystallographic Information Framework files (CIFs), the framework established by the International Union of Crystallography, and the worldwide standard for representing crystallographic …


Crystallography Open Database (Cod): An Open-Access Collection Of Crystal Structures And Platform For World-Wide Collaboration, Saulius Gražulis, Adriana Daškevič, Andrius Merkys, Daniel Chateigner, Luca Lutterotti, Miguel Quirós, Nadezhda R. Serebryanaya, Peter Moeck, Robert T. Downs, Armel Le Bail Nov 2012

Crystallography Open Database (Cod): An Open-Access Collection Of Crystal Structures And Platform For World-Wide Collaboration, Saulius Gražulis, Adriana Daškevič, Andrius Merkys, Daniel Chateigner, Luca Lutterotti, Miguel Quirós, Nadezhda R. Serebryanaya, Peter Moeck, Robert T. Downs, Armel Le Bail

Physics Faculty Publications and Presentations

Using an open-access distribution model, the Crystallography Open Database (COD, http://www.crystallography.net) collects all known 'small molecule / small to medium sized unit cell' crystal structures and makes them available freely on the Internet. As of today, the COD has aggregated ~150,000 structures, offering basic search capabilities and the possibility to download the whole database, or parts thereof using a variety of standard open communication protocols. A newly developed website provides capabilities for all registered users to deposit published and so far unpublished structures as personal communications or pre-publication depositions. Such a setup enables extension of the COD database by many …


Lattice Fringe Fingerprinting In Two Dimensions With Database Support, Peter Moeck, B. Seipel, R. Bjorge, P. Fraundorf Jan 2006

Lattice Fringe Fingerprinting In Two Dimensions With Database Support, Peter Moeck, B. Seipel, R. Bjorge, P. Fraundorf

Physics Faculty Publications and Presentations

A brief introduction to lattice fringe fingerprinting in two dimensions (2D) with database support is given. The method is employed for the identification of the crystal phase of a small ensemble of nanocrystals. The enhanced viability of this method in aberration-corrected transmission electron microscopes (TEMs) and scanning TEMs (STEMs) is also illustrated.