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University of Nebraska - Lincoln

United States Geological Survey: Staff Publications

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Full-Text Articles in Physical Sciences and Mathematics

Design Tradeoffs In Long-Term Research For Stream Salamanders, Adrianne B. Brand, Evan H. Campbell Grant Jan 2017

Design Tradeoffs In Long-Term Research For Stream Salamanders, Adrianne B. Brand, Evan H. Campbell Grant

United States Geological Survey: Staff Publications

Long-term research programs can benefit from early and periodic evaluation of their ability to meet stated objectives. In particular, consideration of the spatial allocation of effort is key. We sampled 4 species of stream salamanders intensively for 2 years (2010–2011) in the Chesapeake and Ohio Canal National Historical Park, Maryland, USA to evaluate alternative distributions of sampling locations within stream networks, and then evaluated via simulation the ability of multiple survey designs to detect declines in occupancy and to estimate dynamic parameters (colonization, extinction) over 5 years for 2 species. We expected that fine scale microhabitat variables (e.g., cobble, detritus) …


Wetland Reserve Program Enhances Site Occupancy And Species Richness In Assemblages Of Anuran Amphibians In The Mississippi Alluvial Valley, Usa, Susan C. Walls, J. Hardin Waddle, Stephen P. Faulkner Jan 2014

Wetland Reserve Program Enhances Site Occupancy And Species Richness In Assemblages Of Anuran Amphibians In The Mississippi Alluvial Valley, Usa, Susan C. Walls, J. Hardin Waddle, Stephen P. Faulkner

United States Geological Survey: Staff Publications

We measured amphibian habitat use to quantify the effectiveness of conservation practices implemented under the Wetland Reserve Program (WRP), an initiative of the U.S. Department of Agriculture’s Natural Resources Conservation Service. From February to June 2007, we quantified calling male anurans in cultivated cropland, former cultivated cropland restored through the WRP, and mature bottomland hardwood forest. Sites were located in two watersheds within the Mississippi Alluvial Valley of Arkansas and Louisiana, USA. We estimated detection probability and site occupancy within each land use category using a Bayesian hierarchical model of community species occurrence, and derived an estimate of species richness …


Spatial Patch Occupancy Patterns Of The Lower Keys Marsh Rabbit, Mitchell J. Eaton, Phillip T. Hughes, James D. Nichols, Anne Morkill, Chad Anderson Jan 2011

Spatial Patch Occupancy Patterns Of The Lower Keys Marsh Rabbit, Mitchell J. Eaton, Phillip T. Hughes, James D. Nichols, Anne Morkill, Chad Anderson

United States Geological Survey: Staff Publications

Reliable estimates of presence or absence of a species can provide substantial information on management questions related to distribution and habitat use but should incorporate the probability of detection to reduce bias. We surveyed for the endangered Lower Keys marsh rabbit (Sylvilagus palustris hefneri) in habitat patches on 5 Florida Key islands, USA, to estimate occupancy and detection probabilities. We derived detection probabilities using spatial replication of plots and evaluated hypotheses that patch location (coastal or interior) and patch size influence occupancy and detection. Results demonstrate that detection probability, given rabbits were present, was <0.5 and suggest that naı¨ve estimates (i.e., estimates without consideration of imperfect detection) of patch occupancy are negatively biased. We found that patch size and location influenced probability of occupancy but not detection. Our findings will be used by Refuge managers to evaluate population trends of Lower Keys marsh rabbits from historical data and to guide management decisions for species recovery. The sampling and analytical methods we used may be useful for researchers and managers of other endangered lagomorphs and cryptic or fossorial animals occupying diverse habitats.


Spatial Patch Occupancy Patterns Of The Lower Keys Marsh Rabbit, Mitchell J. Eaton, Phillip T. Hughes, James D. Nichols, Anne Morkill, Chad Anderson Jan 2011

Spatial Patch Occupancy Patterns Of The Lower Keys Marsh Rabbit, Mitchell J. Eaton, Phillip T. Hughes, James D. Nichols, Anne Morkill, Chad Anderson

United States Geological Survey: Staff Publications

Reliable estimates of presence or absence of a species can provide substantial information on management questions related to distribution and habitat use but should incorporate the probability of detection to reduce bias. We surveyed for the endangered Lower Keys marsh rabbit (Sylvilagus palustris hefneri) in habitat patches on 5 Florida Key islands, USA, to estimate occupancy and detection probabilities. We derived detection probabilities using spatial replication of plots and evaluated hypotheses that patch location (coastal or interior) and patch size influence occupancy and detection. Results demonstrate that detection probability, given rabbits were present, was <0.5 and suggest that naı¨ve estimates (i.e., estimates without consideration of imperfect detection) of patch occupancy are negatively biased. We found that patch size and location influenced probability of occupancy but not detection. Our findings will be used by Refuge managers to evaluate population trends of Lower Keys marsh rabbits from historical data and to guide management decisions for species recovery. The sampling and analytical methods we used may be useful for researchers and managers of other endangered lagomorphs and cryptic or fossorial animals occupying diverse habitats.