Physical Sciences and Mathematics Commons^™

Sediment Oxygen Demand And Stoichiometry Of Irl Nutrient Fluxes, Iulia Bibire

Theses and Dissertations

Eutrophication of coastal systems has become a prominent global issue with a variety of detrimental effects, one of these being the shift in the composition of phytoplankton communities often promoting harmful algal blooms (HABs) resulting at least partially from changes to the relative abundance of N:P:Si. This study investigated nutrient fluxes from muck, a fine-grained and organic-rich sediment, and from sand to determine the importance of these sediments with regards to regulating N:P ratios in the water column. Overall sediment oxygen demand (SOD) was used as an indicator of aerobic decomposition and was found to decrease from north to south …

Effects Of Elevated Temperature On 8-Hydroxy-2'-Deoxyguanosine Expression, Dna Damage And Cellular Apoptosis In The American Oyster (Crassostrea Virginica), Md Faizur Rahman

Theses and Dissertations

Global temperature increases due to anthropogenic activities. The effects of rising temperature are well documented in aquatic organisms. The American oyster is an ideal shellfish species to study on global warming and oxidative DNA damage. In this study, We observed the effects of high temperature on heat shock protein-70 (HSP70), 8-hydroxy-2’-deoxyguanosine (8-OHdG), ssDNA, dsDNA, caspase-3 (CASP3), BAX and γH2AX, a molecular marker of DNA damage, protein expressions in gills of oysters. Immunohistochemical results showed that elevated temperatures (28 and 32°C) significantly increased HSP70, 8-OHdG, dsDNA, γH2AX, BAX and CASP3 protein expressions in gills of oysters compare to control (24°C). In …

Physics-Constrained Hyperspectral Data Exploitation Across Diverse Atmospheric Scenarios, Nicholas M. Westing

Theses and Dissertations

Hyperspectral target detection promises new operational advantages, with increasing instrument spectral resolution and robust material discrimination. Resolving surface materials requires a fast and accurate accounting of atmospheric effects to increase detection accuracy while minimizing false alarms. This dissertation investigates deep learning methods constrained by the processes governing radiative transfer to efficiently perform atmospheric compensation on data collected by long-wave infrared (LWIR) hyperspectral sensors. These compensation methods depend on generative modeling techniques and permutation invariant neural network architectures to predict LWIR spectral radiometric quantities. The compensation algorithms developed in this work were examined from the perspective of target detection performance using …

Snow-Albedo Feedback In Northern Alaska: How Vegetation Influences Snowmelt, Lucas C. Reckhaus

Theses and Dissertations

This paper investigates how the snow-albedo feedback mechanism of the arctic is changing in response to rising climate temperatures. Specifically, the interplay of vegetation and snowmelt, and how these two variables can be correlated. This has the potential to refine climate modelling of the spring transition season. Research was conducted at the ecoregion scale in northern Alaska from 2000 to 2020. Each ecoregion is defined by distinct topographic and ecological conditions, allowing for meaningful contrast between the patterns of spring albedo transition across surface conditions and vegetation types. The five most northerly ecoregions of Alaska are chosen as they encompass …

Late Paleozoic Climatic Reconstruction Of Western Argentina: Glacial Extent And Deglaciation Of Southwestern Gondwana, Kathryn N. Pauls

Theses and Dissertations

Throughout its history Earth has experienced both icehouse and greenhouse conditions. Shifts and transitions from one end member to the other are driven by numerous driving mechanisms on global, orbital and more local scales. In particular, the late Paleozoic ice age (LPIA) is thought to have been driven by global drivers such as the drift of the Gondwanan continent across the South Pole, fluctuations in atmospheric CO2 concentrations, and Milankovitch cycles. It was also affected by more local and regional drivers such as active tectonism along accretionary margins and changes in atmospheric and oceanic circulation patterns. South American Gondwana provides …

Biennial And Low-Frequency Components Of El Niño/Southern Oscillation, James Michael Ryan

Theses and Dissertations

El Niño/Southern Oscillation (ENSO) is a coupled oscillation of sea surface temperatures (SSTs), winds, and air pressure in the eastern and central tropical Pacific, that repeats with quasi-regularity, every 2–7 years. Although the ENSO’s spectral peak is found at a 4–7-yr period, composite El Niño events, taken as the 84 months before and after the peak of each El Niño, show that the length of each event, and often the following La Niña if there is one, usually falls within a quasi-biennial (QB) range of around 18–42 months. We argue that the biennial range of ENSO events stems from the …

Predicting Peak Wind Gusts During Specific Weather Types With The Meteorologically Stratified Gust Factor Model, Teresa Jean Turner

Theses and Dissertations

Peak wind gusts were estimated by the meteorologically stratified gust factor model at Milwaukee, WI (KMKE) for eight different weather types during 2010-2017. The gust factor model couples gust factors with wind speed and direction forecast guidance to produce peak gust forecasts. The model evaluated used two model output statistics (MOS) guidance products at lags ranging from 6-24 hr and was compared with peak gust forecasts provided by the Localized Aviation MOS Program (LAMP) as well as observed gusts reported by automated surface observing systems (ASOS).

Compared with climatology, the gust factor model showed skill when coupled with MOS in …

Using Disruptive Coloration And Ultraviolet Light To Prevent Barnacle Settlement, Kailey Nicole Richard

Theses and Dissertations

Biofouling or the accumulation of unwanted micro and macro organisms is problematic for the shipping industry. Barnacles are one of the most abundant fouling organisms and their settlement on ship hulls can result in costly damage. Several methods have been developed to prevent the formation of biofouling, including antifouling coatings and mechanical techniques, but the search for more effective and environmentally friendly solutions is still ongoing. This thesis investigated two methods aimed at barnacle prevention: color patterning and the application of ultraviolet light. The first method utilized disruptive coloration, a common mechanism observed in nature by terrestrial organisms (i.e. butterflies) …

Organic Sediment Impacts On Seagrasses And Their Associations With Benthic Fauna, Sean Matthew Crowley

Theses and Dissertations

Human-population growth and rapid rates of urbanization have led to eutrophic conditions in estuaries throughout the world. Effects often include severe algal blooms, decreased dissolved oxygen levels, and the accumulation of fine-grained organic-rich sediments. One frequent negative consequence of eutrophication is the decline of seagrasses, a vital component of coastal ecosystems. Seagrasses provide shelter from predation, serve as nursery habitat, stabilize sediments, act as a sink for excess carbon, produce oxygen, and are a food source for many herbivores. Seagrasses are also sensitive to environmental changes, such as declining water quality and increased sedimentation rates. This study examines the impacts …

Effects Of Seasonal Variations And Heat Exposure On Antioxidant Expression And Redox Status In The American Oyster, Crassostrea Virginica: Field And Laboratory Studies, Md Sadequr Rahman

Theses and Dissertations

Increasing atmospheric temperatures influence physiological functions in aquatic organisms. In this study, I observed the effects of seasonal (field study) and laboratory heat exposure (16, 22, 26, and 30°C for 1-week) on prooxidant-antioxidant homeostasis in gills and digestive glands of American oyster. Histological analysis showed an increase in mucus secretion with elevated temperatures in both organs. Immunohistochemical analysis showed a significant increase of heat shock protein-70, dinitrophenyl, and 3-nitrotyrosine protein expressions with higher seasonal and laboratory temperatures indicating heat-induced oxidative and nitrosative stress. This was concomitant with gradual rise in cellular apoptosis. Interestingly, catalase and superoxide dismutase expressions also increased …

Development And Assessment Of An Environmental Dna (Edna) Assay For The Rio Grande Siren And Review Of Edna Metabarcoding Applications, Krista M. Ruppert

Theses and Dissertations

Environmental DNA (eDNA) assays have become a major aspect of amphibian surveys in the past decade. These methods are highly sensitive, making them well-suited for monitoring rare and cryptic species. Current efforts to study the Rio Grande Siren in south Texas have been hampered due to the cryptic nature of these aquatic salamanders. Arid conditions further add to the difficulty in studying this species, as many water bodies they inhabit are ephemeral, sometimes constraining sampling efforts to a short window after heavy rain. Additionally, sirens are known to cease activity and reside underground when ponds begin to dry or as …

Analysis Of The Facilitative Interaction Between Batis Maritima And Avicennia Germinans As A Mangrove Restoration Strategy, Javier R. Navarro

Theses and Dissertations

The multiple experiments conducted in an Avicennia germinans forest in Laguna Vista, TX was focused on determining if facilitation theory could explain the behavior observed between the herbaceous halophyte Batis maritima and A. germinans. I hypnotized that a positive interaction exists but through which mechanisms of facilitation I did not know. The overarching theme of the study is the presence or absence of B. maritima. Facilitation theory tells us that positive interactions are most often found under stressful conditions such as those on the coastal tidal flat of the Laguna Madre. Locally B. maritima has been found to …

An Investigation Into The Trophic Magnification Of Polychlorinated Biphenyls In The Lake Michigan Food Web, Philip Hurst

Theses and Dissertations

Polychlorinated biphenyls (PCBs) are a group of persistent organic pollutants known to contribute to several adverse health conditions in humans including cancers and a suite of liver diseases. While there exist 209 unique PCB congeners, the World Health Organization has identified 12 that pose the greatest health risk to humans due to these congeners’ functional similarity to dioxins, another notoriously toxic class of contaminants. Along with methylmercury, PCBs are the primary drivers behind fish consumption advisories in the Great Lakes. These guidelines are informed primarily by surveys of contaminants in freshwater biota. However, the proliferation of invasive species, such as …

A Feasibility Study Of Microbialites As Paleomagnetic Recorders, Ji-In Jung

Theses and Dissertations

Microbialites are carbonate organosedimentary deposits formed by benthic microbial communities that trap and bind detrital sediments, and/or inorganic and biologically influenced calcification. Any ferromagnetic particles incorporated into the microbialite structure have the potential to preserve variations in Earth’s magnetic field. A paleomagnetic record in microbialites would be useful for reconstructing the geomagnetic field because it may record at a high temporal resolution based on estimated growth rates, thus preserving relatively short-period variations of the Earth’s magnetic field. In addition, microbialites can be found in the geologic record going back ~3.5 Ga, hence potentially providing information on very ancient variations in …

Multidecadal Climate Variability In Observed And Simulated Surface Air Temperature And Sea-Level Pressure, Andrew Aden Westgate

Theses and Dissertations

Accurate estimates of multidecadal climate variability generated internally within the climate system are required to gauge anthropogenic contribution to warming trends and to develop efficient strategies to mitigate climate change. Previous analyses of historical surface air temperatures (SAT) showed that numerical climate prediction models lack a pronounced global mode of observed internal variability — the stadium wave (SW), — which represents a multidecadal undulation originating in the North Atlantic and propagating to other regions of the globe. The present study extends these analyses by exploring co-variability of SAT and sea-level pressure (SLP) within the SW. Addition of SLP data does …

Modeling Of Cloud Droplet Formation: Software Development And Sampling Strategies, Niklas Selke

Theses and Dissertations

Updraft speeds are an important factor in the formation of cloud droplets which play an important role in an atmospheric simulation. The updraft speeds are varying very strongly in small areas of space. Current models do not account for this kind of variability. Support for a probability density function (PDF) based approach in representing the variability of the updraft speeds has been implemented in the Energy Exascale Earth System Model (E3SM). Specifics of the implementation process have been discussed.

Different sampling strategies were tested to analyze the convergence behavior of the new approach to the cloud droplet formation process. It …

Detection And Enumeration Of Bacterial Pathogens In The American Oyster (Crassostrea Virginica), Mohammad Maruf Billah

Theses and Dissertations

American oyster (Crassostrea virginica) is a popular seafood for its delicacy and high nutritional value. Based on increasing concern about contamination of bacterial pathogens in raw oyster, my research objectives have been focused on detection and enumeration of two important bacterial pathogens, Escherichia coli and Salmonella spp. in the American oyster in south Texas waters, local markets and controlled laboratory studies. Immunohistochemical and RT-PCR analyses showed substantial bacterial pathogen’s presence in gills and digestive glands of oysters collected from San Martin Lake and South Padre Island as well as local markets. Laboratory studies showed increasing trend of both …

Effects Of Artificial Substrates On The Recruitment Of Juvenile Fishes In The Northwestern Gulf Of Mexico, Stefany Salinas

Theses and Dissertations

Most artificial reefs (ARs) in the Gulf of Mexico are considered intermediate to high vertical relief structures which have recruited large predatory species indicating lack of juvenile habitat. Small, inexpensive ARs, standard monitoring units for the recruitment of reef fish (SMURFs), were deployed at eight sites at -20m as habitat for juvenile fishes to understand and determine the effects of substrate type on juvenile fishes recruitment. Each site contained four SMURFs with four treatments: small and large rubble (~10 and ~20cm), oyster shells, and bare. Surveys yielded 39 juvenile species, including one of the most economically important species, Lutjanus campechanus, …

Validation Technique For Modeled Bottomside Ionospheres Via Ray Tracing, Kevin S. Burg

Theses and Dissertations

A new method for validating ionosphere models using High Frequency (HF) angle of arrival (AoA) data is presented. AoA measurements from a field campaign held at White Sands Missile Range, New Mexico, USA in January 2014 provide the actual elevation angle, azimuth and group delay results from 10 transmitter-receiver circuits. Simulated AoAs are calculated by ray tracing through the electron density profiles predicted from the ionosphere models hosted by NASA's Community Coordinated Modeling Center: IRI-2016, USU-GAIM, GITM, CTIPe, TIE-GCM, and SAMI3. Through the implementation of metrics including Mean Absolute Error, Prediction Efficiency, Correlation Coefficient, and others, we are able to …

An Analysis Of A Lighting Prediction Threshold For 45th Weather Squadron Electric Field Mill Data, Charles A. Skrovan

Theses and Dissertations

The mission of the 45th Weather Squadron (45 WS) is to “exploit the weather to assure safe access to air and space” for Patrick Air Force Base, Cape Canaveral Air Force Station (CCAFS), and Kennedy Space Center (KSC) in support of various operations (United States Air Force, n.d.). To support that mission the 45 WS hosts a suite of weather detection instruments that include a lightning warning system that consists of an array of 31 electric field mills (EFM) and a lightning detection and ranging system (Department of the Air Force, 1976). Electric field mills at Cape Canaveral continuously record …

A Method For Routine Pm2.5 Obsercation And Incorporation Into Numerical Weather Prediction, Daniel B. Jagoda

Theses and Dissertations

Operational numerical weather prediction (NWP) simulates aerosol abundance using climatic emission inventories due to a lack of available real-time observation. An advocation to monitor aerosol number concentration with a standardized global sensor network is defended. A comparison between observations from the existing network “PurpleAir” and condensation particle counters (CPC) reveals the necessity of regulated instrumentation when measuring aerosol number concentration. NWP initialization by the Goddard Chemistry Aerosol Radiation and Transport (GOCART) module is capable of augmentation by hourly aerosol observation. The disparity between observed in-situ particulate matter smaller than 2.5-μm in diameter (PM_2.5) and Weather Research and Forecasting …

Next-Generation Air Force Weather Metrics Via Bayes Cost Analysis, Brandon M. Bailey

Theses and Dissertations

This research proposes a new methodology for U.S. Air Force weather forecast metrics. Military weather forecasters are essentially statistical classifiers. They categorize future conditions into an operationally relevant category based on current data, much like an Artificial Neural Net or Logistic Regression model. There is extensive literature on statistically-based metrics for these types of classifiers. Additionally, in the U.S. Air Force, forecast errors (errors in classification) have quantifiable operational costs and benefits associated with incorrect or correct classification decisions. There is a methodology in the literature, Bayes Cost, which provides a structure for creating statistically rigorous metrics for classification decisions …

Modulation Of Lightning Occurrence By The Solar Wind, Adam L. Baxter

Theses and Dissertations

Lightning affects military and civilian operations. Characterization of the distribution of global lightning strikes of two detection networks based on solar wind events is analyzed. the median analysis by latitude gave different results for the two network datasets. The KLD pulled out some common features such as the seasonal dependence and a general increase in lightning at the equator. Comparisons between different datasets must be handled carefully. the KLD method may be a way to capture common features, or assess how similar the datasets are. A detailed analysis of the differences between the tow networks detection algorithms and investigating other …

Determining Bulk Aerosol Absorption From Off Axis Backscattering Using Rayleigh Beacon Laser Pulses, Julie C. Grossnickle

Theses and Dissertations

Aerosol absorption and scattering can play a key role in degrading high energy laser performance in the form of thermal blooming and beam attenuation. Aerosol absorption properties are not completely understood, and thus affect how we are able to quantify expected high energy laser weapon performance. The Air Force Institute of Technology Center for Directed Energy (AFIT CDE) developed both Laser Environmental Effects Definition and Reference (LEEDR) and the High Energy Laser End-to-End Operational Simulation (HELEEOS) code to characterize atmospheric radiative transfer effects and evaluate expected directed energy weapon system performance. These packages enable modeling of total irradiance at given …

Simulation Of Sporadic-E Parameters Using Phase Screen Method, Daniel W. Stambovsky

Theses and Dissertations

A phase screen simulation experiment is designed and implemented to model radio occultation through sporadic-E ionospheric disturbances between a GPS transmitter operating at the L1 frequency and a second receiving satellite in low earth orbit (LEO). Simulations were made to test the linear relationship between plasma intensity and scintillation S4 index both posited (Arras and Wickert, 2018) and contended (Gooch et al., 2020) in previous literature. Results brought into question both the linear relationship and the use of S4 as a whole and an alternate metric was sought.

Characterizing Regime-Based Flow Uncertainty, John L. Fioretti

Theses and Dissertations

The goal of this work is to develop a regime-based quantification of horizontal wind field uncertainty utilizing a global ensemble numerical weather prediction model. In this case, the Global Ensemble Forecast System Reforecast (GEFSR) data is utilized. The machine learning algorithm that is employed is the mini-batch K-means clustering algorithm. 850 hPa Horizontal flow fields are clustered and the forecast uncertainty in these flow fields is calculated for different forecast times for regions across the globe. This provides end-users quantified flow-based forecast uncertainty.

Localized Effects Of Hurricane Michael (2018) On Total Electron Content, Joanna E.S. Williams

Theses and Dissertations

Understanding the connection between terrestrial and space environments is an emerging field of study that can significantly improve operational weather forecasting. In particular, it is well known that tropical cyclones (TCs) and thunderstorms can initiate gravity waves that generate fluctuations in the total electron content (TEC) of the ionosphere. These perturbations can deteriorate and delay the transmission of high-frequency (HF) communications, such as emergency services, amateur radio, and aviation. This study investigates changes in TEC according to the number of lightning ashes and the rainfall rates associated with Hurricane Michael (2018). A composite analysis will be performed using the GOES …

Detection Of Reconnection Signatures In Solar Flares, Taylor R. Whitney

Theses and Dissertations

Solar flare forecasting is limited by the current understanding of mechanisms that govern magnetic reconnection, the main physical phenomenon associated with these events. As a result, forecasting relies mainly on climatological correlations to historical events rather than the underlying physics principles. Solar physics models place the neutral point of the reconnection event in the solar corona. Correspondingly, studies of photospheric magnetic fields indicate changes during solar flares -- particularly in relation to the field helicity -- on the solar surface as a result of the associated magnetic reconnection. This study utilizes data from the Solar Dynamics Observatory (SDO) Helioseismic and …