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Oceanography and Atmospheric Sciences and Meteorology

LSU Doctoral Dissertations

Hypoxia

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Full-Text Articles in Physical Sciences and Mathematics

Numerical Experiments Of Hurricane Impact On Vertical Mixing And De-Stratification Of The Louisiana Shelf Waters, Mohammadnabi Allahdadi Jan 2014

Numerical Experiments Of Hurricane Impact On Vertical Mixing And De-Stratification Of The Louisiana Shelf Waters, Mohammadnabi Allahdadi

LSU Doctoral Dissertations

The numerical model FVCOM (Finite Volume Community Ocean Model) was applied to study the effects of Hurricane Katrina on the vertical mixing over the Louisiana shelf and the process of post-storm re-stratification. Wind field from Hurricane Katrina was generated using a single vortex analytical model and was evaluated using available wind measurements over the shelf. Simulations of shelf circulation under Hurricane Katrina were done through several numerical tests to find the best approach for treating vertical eddy viscosity. Model results for the shelf during Katrina demonstrated opposite currents between surface and bottom for most of the shelf area. Results also …


Factors Affecting Short-Term Oxygen Variability In The Northern Gulf Of Mexico Hypoxic Zone, Brenda Leroux Babin Jan 2012

Factors Affecting Short-Term Oxygen Variability In The Northern Gulf Of Mexico Hypoxic Zone, Brenda Leroux Babin

LSU Doctoral Dissertations

Open-water continuous monitoring of DO concentrations at a single station (C6) in the Gulf of Mexico from 1989 to 2008 afforded an excellent opportunity to characterize short-term oxygen variability and to estimate the relative importance of key physical and biological factors controlling the development, persistence, and dissipation of hypoxia. I investigated temporal trends in three aspects of short-term DO variability: respiration rates (i.e., how quickly bottom waters become hypoxic), persistence of hypoxia, and the dissipation of hypoxia (i.e., re-aeration events). I identified the range of respiration rates present at the study site, and showed how these rates vary throughout the …


Microphytobenthos Of The Northern Gulf Of Mexico Hypoxic Area And Their Role In Oxygen Dynamics, Melissa Millman Baustian Jan 2011

Microphytobenthos Of The Northern Gulf Of Mexico Hypoxic Area And Their Role In Oxygen Dynamics, Melissa Millman Baustian

LSU Doctoral Dissertations

The presence or absence of microphytobenthos on the seafloor provides clues about whether benthic oxygen evolution contributes significantly to the oxygen budget of the hypoxic area in the northern Gulf of Mexico. Hypoxia (oxygen < 2 mg l-1) creates inadequate concentrations of dissolved oxygen to support most organisms, such as fish, shrimp and crabs, and occurs over large areas of the Louisiana continental shelf from spring through summer in most years. Oxygen production by benthic autotrophs may offset a decline in oxygen concentrations if there is a functioning community and sufficient light. I sampled three stations (14, 20 and 23 m depths) ~ 100 km west of the Mississippi River over three hypoxic annual cycles (2006 – 2008), and 11 stations along a 14 - 20 m contour on the shelf in late-July in 2006, 2007 and 2008. I used microscopy and high-performance liquid chromatography to estimate the biomass and composition of phytoplankton and microphytobenthos. The potential seasonal oxygen production was estimated in 2007 and 2008 by incubating coupled light/dark sediment cores and bottom water from two stations. The sediment community (cells > 3 um) differed from those in the water column and were frequently benthic pennate diatoms and filamentous cyanobacteria (58-88% seasonally and 1-99% in mid-summer). The concentration of microphytobenthic biomass was usually < 2.0 ug g dry sed-1, and various biotic parameters were influenced by light at the seafloor. Declines in dissolved oxygen over a seasonal cycle in 2007 and 2008 were affected more by the initial dissolved oxygen concentration than by the presence of microphytobenthos that could generate oxygen. The sediment (1.2 - 27.3 mmol O2 m-2 d-1, n = 97) and bottom-water (1.1 - 17.5 mmol m-2 d-1, n = 23) oxygen consumption rates were within the range of the few previously-reported data. This work adds to these data and also provides the only sediment oxygen consumption rates at fixed sites over seasonal time scales. These results provide critical input to three-dimensional, physical-biological models of oxygen dynamics for this hypoxic area.


Modeling The Impacts Of Pulsed Riverine Inflows On Hydrodynamics And Water Quality In The Barataria Bay Estuary, Anindita Das Jan 2010

Modeling The Impacts Of Pulsed Riverine Inflows On Hydrodynamics And Water Quality In The Barataria Bay Estuary, Anindita Das

LSU Doctoral Dissertations

Eutrophication and coastal wetland loss are the major environmental problems affecting estuaries around the world. In Louisiana, controlled diversions of the Mississippi River water back into coastal wetlands are thought to be an important engineering solution that could reverse coastal land loss. There are concerns, however, that freshwater diversions may increase nutrient inputs and create severe eutrophication problems in estuaries and wetlands adjacent to the diversion sites. My dissertation research concerns modeling the effects of the observed and hypothetical freshwater diversion discharges on the hydrodynamics, salinity and water quality in the Barataria estuary, a deltaic estuary in south Louisiana. This …


Assessment Of Oxygen Sources And Sinks In The Northern Gulf Of Mexico Using Stable Oxygen Isotopes, Zoraida Jazmin Quinones-Rivera Jan 2008

Assessment Of Oxygen Sources And Sinks In The Northern Gulf Of Mexico Using Stable Oxygen Isotopes, Zoraida Jazmin Quinones-Rivera

LSU Doctoral Dissertations

Coastal hypoxia (< 2 mg O2L-1) represents a global problem that continues to worsen as nutrient fluxes to these areas increase. The second largest zone of human-induced hypoxia is located on the Louisiana continental shelf where hypoxic bottom waters commonly occur during summertime. This region is strongly impacted by the large flux of freshwater and nutrients from the Mississippi River, which influences both biological and physical processes that control oxygen dynamics. Yet, based on oxygen concentration measurements alone, it is difficult to separate the effects of biological factors from physical factors. To address this problem, I used a dual budget approach to assess the importance of oxygen sources and sinks on the Louisiana continental shelf. The dual budget was based on using stable oxygen isotopes (ä18O) in combination with conventional oxygen concentration measurements. To analyze temporal trends, surface and bottom water samples were collected monthly between July 2001 and July 2003 along an onshore-offshore transect. For better spatial resolution, shelfwide sampling was conducted extending from the Mississippi River Delta to the Louisiana-Texas border in the month of July of 2001, 2002, and 2003. Oxygen saturations values ranged between 180% at the surface and almost 0% close to the bottom with a corresponding range of ä18O values from 15‰ to 50‰. Biological parameters were important during all seasons for surface oxygen dynamics. The effects of physical factors were less apparent, except during severe physical disturbances. Bottom water oxygen dynamics showed clear seasonal signals of high oxygen depletion and larger contributions of benthic respiration during the summer, which corresponded to the strong stratification of the water column. In bottom waters, summer oxygen depletion was predominantly due to benthic respiration, accounting for about 73%, 80% and 60% of the total oxygen loss for 2001, 2002 and 2003 respectively. Model estimates of production/respiration (P/R) ratio during the July shelfwide cruises indicated that surface waters were productive with an average calculated P/R above 1. Depth stratified sampling (5 m intervals), which started in July 2002, showed that productivity in the mixed layer (5 to 10 m) was not homogeneous. Calculated P/R exceeded 1 only in the surface layer, while at 5 m P/R was approximately 1 and at a depth of 10 m, P/R was less than 1. Additionally, hypoxic conditions were only detected within 5 m of the bottom sediments. The dual budget approach yielded new estimates of productivity dynamics in surface waters and of sediment oxygen demand in bottom waters. For the first time, this study provided routine insight into productivity and respiration dynamics over large temporal and spatial scales. This could not have been accomplished using traditional methods because they commonly rely on time-consuming incubations. The study has shown that respiration dynamics in bottom waters vary seasonally with higher contribution of benthic respiration during stratified summer conditions and prevalent water column respiration during fall and winter. In contrast, seasonality in surface waters was less pronounced as productivity was more dependent on (salinity-inferred) nutrient supply than climatic forcing.


Predicting Water Quality Effects On Bay Anchovy (Anchoa Mitchilli) Growth And Production In Chesapeake Bay: Linking Water Quality And Individual-Based Fish Models, Aaron Thomas Adamack Jan 2007

Predicting Water Quality Effects On Bay Anchovy (Anchoa Mitchilli) Growth And Production In Chesapeake Bay: Linking Water Quality And Individual-Based Fish Models, Aaron Thomas Adamack

LSU Doctoral Dissertations

Water quality in the Chesapeake Bay and the Patuxent River has decreased since the 1950s due to an increase in nutrient loadings. Increased nutrient loads have caused an increase in the extent and duration of hypoxic conditions. Restoration via large-scale reductions in nutrient loadings is now underway. How reducing nutrient loadings will affect water quality is well predicted; however the effect on fish is generally unknown as most water quality models do not include trophic levels higher than zooplankton. I combined two water quality models with bay anchovy models (Anchoa mitchilli) to examine the effects of changes in nutrient loadings …