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Articles 1 - 6 of 6
Full-Text Articles in Physical Sciences and Mathematics
Can Demographic Histories Explain Long-Term Isolation And Recent Pulses Of Asymmetric Gene Flow Between Highly Divergent Grey Fox Lineages?, Sophie Preckler-Quisquater, Elizabeth M. Kierepka, Dawn M. Reding, Antoinette J. Piaggio, Benjamin N. Sacks
Can Demographic Histories Explain Long-Term Isolation And Recent Pulses Of Asymmetric Gene Flow Between Highly Divergent Grey Fox Lineages?, Sophie Preckler-Quisquater, Elizabeth M. Kierepka, Dawn M. Reding, Antoinette J. Piaggio, Benjamin N. Sacks
USDA Wildlife Services: Staff Publications
Secondary contact zones between deeply divergent, yet interfertile, lineages provide windows into the speciation process. North American grey foxes (Urocyon cinereoargenteus) are divided into western and eastern lineages that diverged approximately 1 million years ago. These ancient lineages currently hybridize in a relatively narrow zone of contact in the southern Great Plains, a pattern more commonly observed in smaller-bodied taxa, which suggests relatively recent contact after a long period of allopatry. Based on local ancestry inference with whole-genome sequencing (n = 43), we identified two distinct Holocene pulses of admixture. The older pulse (500–3500 YBP) reflected unidirectional …
Low Levels Of Hybridization Between Sympatric Cold-Water-Adapted Arctic Cod And Polar Cod In The Beaufort Sea Confirm Genetic Distinctiveness, Robert E. Wilson, Sarah A. Sonsthagen, Philip Lavretsky, Andrew Majewski, Einar Árnason, Katrín Halldórsdóttir, Axel W. Einarsson, Kate Wedemeyer, Sandra L. Talbot
Low Levels Of Hybridization Between Sympatric Cold-Water-Adapted Arctic Cod And Polar Cod In The Beaufort Sea Confirm Genetic Distinctiveness, Robert E. Wilson, Sarah A. Sonsthagen, Philip Lavretsky, Andrew Majewski, Einar Árnason, Katrín Halldórsdóttir, Axel W. Einarsson, Kate Wedemeyer, Sandra L. Talbot
Nebraska Cooperative Fish and Wildlife Research Unit: Staff Publications
As marine ecosystems respond to climate change and other stressors, it is necessary to evaluate current and past hybridization events to gain insight on the outcomes and drivers of such events. Ancestral introgression within the gadids has been suggested to allow cod to inhabit a variety of habitats. Little attention has been given to contemporary hybridization, especially within cold-water-adapted cod (Boreogadus saida Lepechin, 1774 and Arctogadus glacialis Peters, 1872). We used whole-genome, restriction-site associated, and mitochondrial sequence data to explore the degree and direction of hybridization between these species where previous hybridization had not been reported. Although nearly identical …
Phylogenomics Reveals Ancient And Contemporary Gene Flow Contributing To The Evolutionary History Of Sea Ducks (Tribe Mergini), Philip Lavretsky, Robert E. Wilson, Sandra L. Talbot, Sarah A. Sonsthagen
Phylogenomics Reveals Ancient And Contemporary Gene Flow Contributing To The Evolutionary History Of Sea Ducks (Tribe Mergini), Philip Lavretsky, Robert E. Wilson, Sandra L. Talbot, Sarah A. Sonsthagen
Nebraska Cooperative Fish and Wildlife Research Unit: Staff Publications
Insight into complex evolutionary histories continues to build through broad comparative phylogenomic and population genomic studies. In particular, there is a need to understand the extent and scale that gene flow contributes to standing genomic diversity and the role introgression has played in evolutionary processes such as hybrid speciation. Here, we investigate the evolutionary history of the Mergini tribe (sea ducks) by coupling multi-species comparisons with phylogenomic analyses of thousands of nuclear ddRAD-seq loci, including Z-sex chromosome and autosomal linked loci, and the mitogenome assayed across all extant sea duck species in North America. All sea duck species are strongly …
Substantial Red Wolf Genetic Ancestry Persists In Wild Canids Of Southwestern Louisiana, Jennifer R. Adams, John J. Cox, Lisette P. Waits
Substantial Red Wolf Genetic Ancestry Persists In Wild Canids Of Southwestern Louisiana, Jennifer R. Adams, John J. Cox, Lisette P. Waits
Forestry and Natural Resources Faculty Publications
Concerns over red wolf (Canis rufus) extinction caused by hybridization with coyotes (C. latrans) led to the capture and removal of remnant wild wolves from southwestern Louisiana and southeastern Texas, United States, during the 1970s. Here we show that despite decades of unmitigated hybridization, and declaration of endangered red wolves as functionally extinct in the wild, red wolf mitochondrial or nuclear DNA ancestry persists in ∼55% of contemporary wild canids sampled in southwestern Louisiana. Surprisingly, one individual had 78–100% red wolf ancestry, which is within the range for 75% red wolf, red wolf backcross, or putative …
Mixed-Source Reintroductions Lead To Outbreeding Depression In Second-Generation Descendents Of A Native North American Fish, David D. Huff, Loren M. Miller, Christopher J. Chizinski, Bruce Vondracek
Mixed-Source Reintroductions Lead To Outbreeding Depression In Second-Generation Descendents Of A Native North American Fish, David D. Huff, Loren M. Miller, Christopher J. Chizinski, Bruce Vondracek
Nebraska Cooperative Fish and Wildlife Research Unit: Staff Publications
Reintroductions are commonly employed to preserve intraspecific biodiversity in fragmented landscapes. However, reintroduced populations are frequently smaller and more geographically isolated than native populations. Mixing genetically, divergent sources are often proposed to attenuate potentially low genetic diversity in reintroduced populations that may result from small effective population sizes. However, a possible negative tradeoff for mixing sources is outbreeding depression in hybrid offspring. We examined the consequences of mixed-source reintroductions on several fitness surrogates at nine slimy sculpin (Cottus cognatus) reintroduction sites in south-east Minnesota. We inferred the relative fitness of each crosstype in the reintroduced populations by comparing …
Phylogeography Of The Rufous-Naped Wren (Campylorhynchus Rufinucha): Speciation And Hybridization In Mesoamerica, Hernan Vazquez-Miranda, Adolfo G. Navarro-Siguenza, Kevin E. Omland
Phylogeography Of The Rufous-Naped Wren (Campylorhynchus Rufinucha): Speciation And Hybridization In Mesoamerica, Hernan Vazquez-Miranda, Adolfo G. Navarro-Siguenza, Kevin E. Omland
School of Natural Resources: Faculty Publications
The Rufous-naped Wren (Campylorhynchus rufinucha) is a sedentary, morphologically variable species distributed in the dry forests of Mesoamerica. It ranges from Colima, Mexico, south to Costa Rica along the Pacific slope, with a disjunct population in central Veracruz. Populations of two forms on the Pacific slope intergrade in Chiapas, Mexico, apparently as a result of secondary contact. We sequenced a mitochondrial DNA (mtDNA) gene to explore phylogeographic patterns and hybridization. We found three divergent lineages, two geographically spanning the Isthmus of Tehuantepec and a disjunct Veracruz population. Analyses of molecular variation and statistics are consistent with genetically distinct …