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- SMU Data Science Review (2)
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Articles 1 - 15 of 15
Full-Text Articles in Physical Sciences and Mathematics
Clinical Diagnosis Support With Convolutional Neural Network By Transfer Learning, Spencer Fogleman, Jeremy Otsap, Sangrae Cho
Clinical Diagnosis Support With Convolutional Neural Network By Transfer Learning, Spencer Fogleman, Jeremy Otsap, Sangrae Cho
SMU Data Science Review
Breast cancer is prevalent among women in the United States. Breast cancer screening is standard but requires a radiologist to review screening images to make a diagnosis. Diagnosis through the traditional screening method of mammography currently has an accuracy of about 78% for women of all ages and demographics. A more recent and precise technique called Digital Breast Tomosynthesis (DBT) has shown to be more promising but is less well studied. A machine learning model trained on DBT images has the potential to increase the success of identifying breast cancer and reduce the time it takes to diagnose a patient, …
Factors Influencing Intent To Take A Covid-19 Test In The United States, Sheila Rutto
Factors Influencing Intent To Take A Covid-19 Test In The United States, Sheila Rutto
Theses and Dissertations
In 2020, COVID-19 became the first pandemic in the world’s history that brought the entire world to an abrupt and unexpected halt. Since the first reported case of the disease to date, the novel coronavirus has been able to wreak havoc in literary every corner of the globe and left an ever-growing number of unprecedented fatalities. The normal way of life has been disrupted, and the level of uncertainty about the end of this pandemic continues to manifest to many. Due to the urgency to bring this pandemic under control, medical officers have been able to recommend actions that people …
Determining States Of Movement In Humans Using Minimally Processed Eeg Signals And Various Classification Methods, Maurice Barnett
Determining States Of Movement In Humans Using Minimally Processed Eeg Signals And Various Classification Methods, Maurice Barnett
All Theses
Electroencephalography (EEG) is a non-invasive technique used in both clinical and research settings to record neuronal signaling in the brain. The location of an EEG signal as well as the frequencies at which its neuronal constituents fire correlate with behavioral tasks, including discrete states of motor activity. Due to the number of channels and fine temporal resolution of EEG, a dense, high-dimensional dataset is collected. Transcranial direct current stimulation (tDCS) is a treatment that has been suggested to improve motor functions of Parkinson’s disease and chronic stroke patients when stimulation occurs during a motor task. tDCS is commonly administered without …
Exploratory Data Mining Techniques (Decision Tree Models) For Examining The Impact Of Internet-Based Cognitive Behavioral Therapy For Tinnitus: Machine Learning Approach, Hansapani Rodrigo, Eldré W. Beukes, Gerhard Andersson, Vinaya Manchaiah
Exploratory Data Mining Techniques (Decision Tree Models) For Examining The Impact Of Internet-Based Cognitive Behavioral Therapy For Tinnitus: Machine Learning Approach, Hansapani Rodrigo, Eldré W. Beukes, Gerhard Andersson, Vinaya Manchaiah
School of Mathematical and Statistical Sciences Faculty Publications and Presentations
Background: There is huge variability in the way that individuals with tinnitus respond to interventions. These experiential variations, together with a range of associated etiologies, contribute to tinnitus being a highly heterogeneous condition. Despite this heterogeneity, a “one size fits all” approach is taken when making management recommendations. Although there are various management approaches, not all are equally effective. Psychological approaches such as cognitive behavioral therapy have the most evidence base. Managing tinnitus is challenging due to the significant variations in tinnitus experiences and treatment successes. Tailored interventions based on individual tinnitus profiles may improve outcomes. Predictive models of treatment …
High-Dimensional Feature Selection And Multi-Level Causal Mediation Analysis With Applications To Human Aging And Cluster-Based Intervention Studies, Hachem Saddiki
Doctoral Dissertations
Many questions in public health and medicine are fundamentally causal in that our objective is to learn the effect of some exposure, randomized or not, on an outcome of interest. As a result, causal inference frameworks and methodologies have gained interest as a promising tool to reliably answer scientific questions. However, the tasks of identifying and efficiently estimating causal effects from observed data still pose significant challenges under complex data generating scenarios. We focus on (1) high-dimensional settings where the number of variables is orders of magnitude higher than the number of observations; and (2) multi-level settings, where study participants …
Improving Animal Monitoring Using Small Unmanned Aircraft Systems (Suas) And Deep Learning Networks, Meilun Zhou, Jared A. Elmore, Sathishkumar Samiappan, Kristine O. Evans, Morgan Pfeiffer, Bradley F. Blackwell, Raymond B. Iglay
Improving Animal Monitoring Using Small Unmanned Aircraft Systems (Suas) And Deep Learning Networks, Meilun Zhou, Jared A. Elmore, Sathishkumar Samiappan, Kristine O. Evans, Morgan Pfeiffer, Bradley F. Blackwell, Raymond B. Iglay
USDA Wildlife Services: Staff Publications
In recent years, small unmanned aircraft systems (sUAS) have been used widely to monitor animals because of their customizability, ease of operating, ability to access difficult to navigate places, and potential to minimize disturbance to animals. Automatic identification and classification of animals through images acquired using a sUAS may solve critical problems such as monitoring large areas with high vehicle traffic for animals to prevent collisions, such as animal-aircraft collisions on airports. In this research we demonstrate automated identification of four animal species using deep learning animal classification models trained on sUAS collected images. We used a sUAS mounted with …
Enhancing Microbiome Host Disease Prediction With Variational Autoencoders, Celeste Manughian-Peter
Enhancing Microbiome Host Disease Prediction With Variational Autoencoders, Celeste Manughian-Peter
Computational and Data Sciences (MS) Theses
Advancements in genetic sequencing methods for microbiomes in recent decades have permitted the collection of taxonomic and functional profiles of microbial communities, accelerating the discovery of the functional aspects of the microbiome and generating an increased interest among clinicians in applying these techniques with patients. This advancement has coincided with software and hardware improvements in the field of machine learning and deep learning. Combined, these advancements implicate further potential for progress in disease diagnosis and treatment in humans. The ability to classify a human microbiome profile into a disease category, and additionally identify the differentiating factors within the profile between …
Graphical Models In Reconstructability Analysis And Bayesian Networks, Marcus Harris, Martin Zwick
Graphical Models In Reconstructability Analysis And Bayesian Networks, Marcus Harris, Martin Zwick
Systems Science Faculty Publications and Presentations
Reconstructability Analysis (RA) and Bayesian Networks (BN) are both probabilistic graphical modeling methodologies used in machine learning and artificial intelligence. There are RA models that are statistically equivalent to BN models and there are also models unique to RA and models unique to BN. The primary goal of this paper is to unify these two methodologies via a lattice of structures that offers an expanded set of models to represent complex systems more accurately or more simply. The conceptualization of this lattice also offers a framework for additional innovations beyond what is presented here. Specifically, this paper integrates RA and …
Diagnostic Accuracy Of Machine Learning Models To Identify Congenital Heart Disease: A Meta-Analysis, Zahra Hoodbhoy, Uswa Jiwani, Saima Sattar, Rehana A. Salam, Babar Hasan, Jai K. Das
Diagnostic Accuracy Of Machine Learning Models To Identify Congenital Heart Disease: A Meta-Analysis, Zahra Hoodbhoy, Uswa Jiwani, Saima Sattar, Rehana A. Salam, Babar Hasan, Jai K. Das
Department of Paediatrics and Child Health
Background: With the dearth of trained care providers to diagnose congenital heart disease (CHD) and a surge in machine learning (ML) models, this review aims to estimate the diagnostic accuracy of such models for detecting CHD.
Methods: A comprehensive literature search in the PubMed, CINAHL, Wiley Cochrane Library, and Web of Science databases was performed. Studies that reported the diagnostic ability of ML for the detection of CHD compared to the reference standard were included. Risk of bias assessment was performed using Quality Assessment for Diagnostic Accuracy Studies-2 tool. The sensitivity and specificity results from the studies were used to …
Machine Learning In The Health Industry: Predicting Congestive Heart Failure And Impactors, Alexandra Norman, James Harding, Daria Zhukova
Machine Learning In The Health Industry: Predicting Congestive Heart Failure And Impactors, Alexandra Norman, James Harding, Daria Zhukova
SMU Data Science Review
Cardiovascular diseases, Congestive Heart Failure in particular, are a leading cause of deaths worldwide. Congestive Heart Failure has high mortality and morbidity rates. The key to decreasing the morbidity and mortality rates associated with Congestive Heart Failure is determining a method to detect high-risk individuals prior to the development of this often-fatal disease. Providing high-risk individuals with advanced knowledge of risk factors that could potentially lead to Congestive Heart Failure, enhances the likelihood of preventing the disease through implementation of lifestyle changes for healthy living. When dealing with healthcare and patient data, there are restrictions that led to difficulties accessing …
The Future Of Artificial Intelligence In The Healthcare Industry, Erika Bonnist
The Future Of Artificial Intelligence In The Healthcare Industry, Erika Bonnist
Honors Theses
Technology has played an immense role in the evolution of healthcare delivery for the United States and on an international scale. Today, perhaps no innovation offers more potential than artificial intelligence. Utilizing machine intelligence as opposed to human intelligence for the purposes of planning, offering solutions, and providing insights, AI has the ability to alter traditional dynamics between doctors, patients, and administrators; this reality is now producing both elation at artificial intelligence's medical promise and uncertainty regarding its capacity in current systems. Nevertheless, current trends reveal that interest in AI among healthcare stakeholders is continuously increasing, and with the current …
A Comprehensive Review On Medical Diagnosis Using Machine Learning, Kaustubh Arun Bhavsar, Ahed Abugabah, Jimmy Singla, Ahmad Ali Alzubi, Ali Kashif Bashir, Nikita
A Comprehensive Review On Medical Diagnosis Using Machine Learning, Kaustubh Arun Bhavsar, Ahed Abugabah, Jimmy Singla, Ahmad Ali Alzubi, Ali Kashif Bashir, Nikita
All Works
The unavailability of sufficient information for proper diagnosis, incomplete or miscommunication between patient and the clinician, or among the healthcare professionals, delay or incorrect diagnosis, the fatigue of clinician, or even the high diagnostic complexity in limited time can lead to diagnostic errors. Diagnostic errors have adverse effects on the treatment of a patient. Unnecessary treatments increase the medical bills and deteriorate the health of a patient. Such diagnostic errors that harm the patient in various ways could be minimized using machine learning. Machine learning algorithms could be used to diagnose various diseases with high accuracy. The use of machine …
Estimating Wildlife Strike Costs At Us Airports: A Machine Learning Approach, Levi Altringer, Jordan Navin, Michael J. Begier, Stephanie A. Shwiff, Aaron M. Anderson
Estimating Wildlife Strike Costs At Us Airports: A Machine Learning Approach, Levi Altringer, Jordan Navin, Michael J. Begier, Stephanie A. Shwiff, Aaron M. Anderson
USDA Wildlife Services: Staff Publications
Current lower bound estimates of the economic burden of wildlife strikes make use of mean cost assignment to impute missing values in the National Wildlife Strike Database (NWSD). The accuracy of these estimates, however, are undermined by the skewed nature of reported cost data and fail to account for differences in observed strike characteristics—e.g., type of aircraft, size of aircraft, type of damage, size of animal struck, etc. This paper makes use of modern machine learning techniques to provide a more accurate measure of the strike-related costs that accrue to the US civil aviation industry. We estimate that wildlife strikes …
Adaptive Physics-Based Non-Rigid Registration For Immersive Image-Guided Neuronavigation Systems, Fotis Drakopoulos, Christos Tsolakis, Angelos Angelopoulos, Yixun Liu, Chengjun Yao, Kyriaki Rafailia Kavazidi, Nikolaos Foroglou, Andrey Fedorov, Sarah Frisken, Ron Kikinis, Alexandra Golby, Nikos Chrisochoides
Adaptive Physics-Based Non-Rigid Registration For Immersive Image-Guided Neuronavigation Systems, Fotis Drakopoulos, Christos Tsolakis, Angelos Angelopoulos, Yixun Liu, Chengjun Yao, Kyriaki Rafailia Kavazidi, Nikolaos Foroglou, Andrey Fedorov, Sarah Frisken, Ron Kikinis, Alexandra Golby, Nikos Chrisochoides
Computer Science Faculty Publications
Objective: In image-guided neurosurgery, co-registered preoperative anatomical, functional, and diffusion tensor imaging can be used to facilitate a safe resection of brain tumors in eloquent areas of the brain. However, the brain deforms during surgery, particularly in the presence of tumor resection. Non-Rigid Registration (NRR) of the preoperative image data can be used to create a registered image that captures the deformation in the intraoperative image while maintaining the quality of the preoperative image. Using clinical data, this paper reports the results of a comparison of the accuracy and performance among several non-rigid registration methods for handling brain deformation. A …
Advancing Cyanobacteria Biomass Estimation From Hyperspectral Observations: Demonstrations With Hico And Prisma Imagery, Ryan E. O'Shea, Nima Pahlevan, Brandon Smith, Mariano Bresciani, Todd Egerton, Claudia Giardino, Lin Li, Tim Moore, Antonio Ruiz-Verdu, Steve Ruberg, Stefan G.H. Simis, Richard Stumpf, Diana Vaičiūtė
Advancing Cyanobacteria Biomass Estimation From Hyperspectral Observations: Demonstrations With Hico And Prisma Imagery, Ryan E. O'Shea, Nima Pahlevan, Brandon Smith, Mariano Bresciani, Todd Egerton, Claudia Giardino, Lin Li, Tim Moore, Antonio Ruiz-Verdu, Steve Ruberg, Stefan G.H. Simis, Richard Stumpf, Diana Vaičiūtė
Biological Sciences Faculty Publications
Retrieval of the phycocyanin concentration (PC), a characteristic pigment of, and proxy for, cyanobacteria biomass, from hyperspectral satellite remote sensing measurements is challenging due to uncertainties in the remote sensing reflectance (∆Rrs) resulting from atmospheric correction and instrument radiometric noise. Although several individual algorithms have been proven to capture local variations in cyanobacteria biomass in specific regions, their performance has not been assessed on hyperspectral images from satellite sensors. Our work leverages a machine-learning model, Mixture Density Networks (MDNs), trained on a large (N = 939) dataset of collocated in situ chlorophyll-a concentrations (Chla), …