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Physical Sciences and Mathematics Commons

Open Access. Powered by Scholars. Published by Universities.®

Mathematics

Utah State University

2016

Expression profiles

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Full-Text Articles in Physical Sciences and Mathematics

Expression Profiles Of Mirna Subsets Distinguish Human Colorectal Carcinoma And Normal Colonic Mucosa, Daniel F. Pellatt, John R. Stevens, Roger K. Wolff, Lila E. Mullany, Jennifer S. Herrick, Wade Samowitz, Martha L. Slattery Mar 2016

Expression Profiles Of Mirna Subsets Distinguish Human Colorectal Carcinoma And Normal Colonic Mucosa, Daniel F. Pellatt, John R. Stevens, Roger K. Wolff, Lila E. Mullany, Jennifer S. Herrick, Wade Samowitz, Martha L. Slattery

Mathematics and Statistics Faculty Publications

OBJECTIVES: MicroRNAs (miRNAs) are small, non-protein-coding RNA molecules that are commonly dysregulated in colorectal tumors. The objective of this study was to identify smaller subsets of highly predictive miRNAs.

METHODS: Data come from population-based studies of colorectal cancer conducted in Utah and the Kaiser Permanente Medical Care Program. Tissue samples were available for 1,953 individuals, of which 1,894 had carcinoma tissue and 1,599 had normal mucosa available for statistical analysis. Agilent Human miRNA Microarray V.19.0 was used to generate miRNA expression profiles; validation of expression levels was carried out using quantitative PCR. We used random forest analysis and verified findings …