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Physical Sciences and Mathematics Commons

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Mathematics

University of Nebraska - Lincoln

2005

Approximation algorithms

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Full-Text Articles in Physical Sciences and Mathematics

Reversals And Transpositions Over Finite Alphabets, A. J. Radcliffe, A. D. Scott, E. L. Wilmer Jan 2005

Reversals And Transpositions Over Finite Alphabets, A. J. Radcliffe, A. D. Scott, E. L. Wilmer

Department of Mathematics: Faculty Publications

Extending results of Christie and Irving, we examine the action of reversals and transpositions on finite strings over an alphabet of size k. We show that determining reversal, transposition, or signed reversal distance between two strings over a finite alphabet is NP-hard, while for “dense” instances we give a polynomial-time approximation scheme. We also give a number of extremal results, as well as investigating the distance between random strings and the problem of sorting a string over a finite alphabet.