Physical Sciences and Mathematics Commons^™

Section Abstracts: Astronomy, Mathematics And Physics With Materials Science

Virginia Journal of Science

Abstracts for the Astronomy, Mathematics, and Physics with Materials Science Section for the 89th Annual Meeting of the Virginia Academy of Science, May 25-27, 2011, University of Richmond, Richmond VA.

Examination Timetabling With Mathematical Programming An Application In Turkish Air Force Academy, Emrah Koksalmis

Engineering Management & Systems Engineering Theses & Dissertations

The focus of this thesis is the educational timetabling problem, which is a very challenging problem to solve especially with a high number of the departments, branches, classes, and students. Due to the large scale of educational timetabling problems and preferences of the stakeholders, it is almost impossible to form a general model that solves all of the timetabling problems in the literature. This resulted in the need to develop and employ specific models for specific institutions.

The purpose of this study is to develop a mathematical programming model that solves the examination timetabling problem in Turkish Air Force Academy …

Epistemic Strategies For Solving Two-Dimensional Physics Problems, Mary Elyse Hing-Hickman

Physics Theses & Dissertations

An epistemic strategy is one in which a person takes a piece of knowledge and uses it to create new knowledge. Students in algebra and calculus based physics courses use epistemic strategies to solve physics problems. It is important to map how students use these epistemic strategies to solve physics problems in order to provide insight into the problem solving process.

In this thesis three questions were addressed: (1) What epistemic strategies do students use when solving two-dimensional physics problems that require vector algebra? (2) Do vector preconceptions in kinematics and Newtonian mechanics hinder a student's ability to apply the …

A Three Dimensional Green's Function Solution Technique For The Transport Of Heavy Ions In Laboratory And Space, Candice Rockell Gerstner

Mathematics & Statistics Theses & Dissertations

In the future, astronauts will be sent into space for longer durations of time compared to previous missions. The increased risk of exposure to ionizing radiation, such as Galactic Cosmic Rays and Solar Particle Events, is of great concern. Consequently, steps must be taken to ensure astronaut safety by providing adequate shielding. The shielding and exposure of space travelers is controlled by the transport properties of the radiation through the spacecraft, its onboard systems and the bodies of the individuals themselves. Meeting the challenge of future space programs will therefore require accurate and efficient methods for performing radiation transport calculations …

From Isotropic To Anisotropic Side Chain Representations: Comparison Of Three Models For Residue Contact Estimation, Weitao Sun, Jing He

Computer Science Faculty Publications

The criterion to determine residue contact is a fundamental problem in deriving knowledge-based mean-force potential energy calculations for protein structures. A frequently used criterion is to require the side chain center-to-center distance or the C-alpha-to-C-alpha atom distance to be within a pre-determined cutoff distance. However, the spatially anisotropic nature of the side chain determines that it is challenging to identify the contact pairs. This study compares three side chain contact models: the Atom Distance criteria (ADC) model, the Isotropic Sphere Side chain (ISS) model and the Anisotropic Ellipsoid Side chain (AES) model using 424 high resolution protein structures in the …

Analysis Of Biological Features Associated With Meiotic Recombination Hot And Cold Spots In Saccharomyces Cerevisiae, Loren Hansen, Nak-Kyeong Kim, Leonardo Mariño-Ramírez, David Landsman

Mathematics & Statistics Faculty Publications

Meiotic recombination is not distributed uniformly throughout the genome. There are regions of high and low recombination rates called hot and cold spots, respectively. The recombination rate parallels the frequency of DNA double-strand breaks (DSBs) that initiate meiotic recombination. The aim is to identify biological features associated with DSB frequency. We constructed vectors representing various chromatin and sequence-based features for 1179 DSB hot spots and 1028 DSB cold spots. Using a feature selection approach, we have identified five features that distinguish hot from cold spots in Saccharomyces cerevisiae with high accuracy, namely the histone marks H3K4me3, H3K14ac, H3K36me3, and H3K79me3; …

Putting The X In Biology: A Review Of The Mathematics Of Life, John Adam

Mathematics & Statistics Faculty Publications

(First Paragraph) Charles Darwin's 1859 work On the Origin of the Species contained no equations. But that does not mean mathematics has no role to play in the science of life; in fact, the field of biomathematics is burgeoning and has been for several decades. Ian Stewart's new book does an admirable job of unfolding the mathematics undergirding so much of the research being carried out today in the many fields that comprise the subject of biology. Stewart sets the context by noting five great revolutions that have changed the way scientists think about life. These five revolutions are: (i) …

Numerics Of The Lattice Boltzmann Method: Effects Of Collision Models On The Lattice Boltzmann Simulations, Li-Shi Luo, Wei Liao, Xingwang Chen, Yan Peng, Wei Zhang

Mathematics & Statistics Faculty Publications

We conduct a comparative study to evaluate several lattice Boltzmann (LB) models for solving the near incompressible Navier-Stokes equations, including the lattice Boltzmann equation with the multiple-relaxation-time (MRT), the two-relaxation-time (TRT), the single-relaxation-time (SRT) collision models, and the entropic lattice Boltzmann equation (ELBE). The lid-driven square cavity flow in two dimensions is used as a benchmark test. Our results demonstrate that the ELBE does not improve the numerical stability of the SRT or the lattice Bhatnagar-Gross-Krook (LBGK) model. Our results also show that the MRT and TRT LB models are superior to the ELBE and LBGK models in terms of …

Weighted Scores Method For Regression Models With Dependent Data, Aristidis K. Nikoloulopoulos, Harry Joe, N. Rao Chaganty

Mathematics & Statistics Faculty Publications

There are copula-based statistical models in the literature for regression with dependent data such as clustered and longitudinal overdispersed counts, for which parameter estimation and inference are straightforward. For situations where the main interest is in the regression and other univariate parameters and not the dependence, we propose a "weighted scores method", which is based on weighting score functions of the univariate margins. The weight matrices are obtained initially fitting a discretized multivariate normal distribution, which admits a wide range of dependence. The general methodology is applied to negative binomial regression models. Asymptotic and small-sample efficiency calculations show that our …

Mathematics In The Age Of Technology: There Is A Place For Technology In The Mathematics Classroom, Helen Crompton

Teaching & Learning Faculty Publications

In today’s world of ubiquitous computing there are a number of technologies available to K-12 educators for teaching and learning mathematics. However, Koehler and Mishra (2008) have described how teaching and learning with such technologies presents a “wicked problem,” as it can involve a number of variables, independent of each other and contextually bound, that need to be brought together. This article highlights the advantages technology offers for mathematics education and looks at some of the reasons behind the poor uptake, such as teacher beliefs and lack of training. A number of solutions are offered to address these issues, including …