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Marine Biology

2021

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Articles 1 - 30 of 211

Full-Text Articles in Physical Sciences and Mathematics

Linking Migration To Community Resilience In The Receiving Basin Of A Large-Scale Water Transfer Project, Anna Erwin, Zhao Ma, Ruxandra Popovici, Emma Patricia Salas O’Brien, Laura Zanotti, Chelsea A. Silva, Eliseo Zeballos Zeballos, Jonathan Bauchet, Nelly Ramírez Calderón, Glenn Roberto Arce Larreah Dec 2021

Linking Migration To Community Resilience In The Receiving Basin Of A Large-Scale Water Transfer Project, Anna Erwin, Zhao Ma, Ruxandra Popovici, Emma Patricia Salas O’Brien, Laura Zanotti, Chelsea A. Silva, Eliseo Zeballos Zeballos, Jonathan Bauchet, Nelly Ramírez Calderón, Glenn Roberto Arce Larreah

School of Earth, Environmental, and Marine Sciences Faculty Publications and Presentations

Large-scale water transfer projects (LWTPs) transfer water to urban and agricultural areas. The Majes-Siguas canal, established in 1983, is an LWTP that created a thriving agricultural area through irrigating the Majes district in the Atacama Desert of Peru. Like other LWTP receiving basins, the project has attracted an influx of migrants who work on the farms. At the same time, the Majes LWTP is the district’s only source of water and has an aging infrastructure which presents significant risks. While many studies critically analyze the consequences of LWTPs in water supply basins, few evaluate the resilience of communities living in …


Responses Of Benthic Calcifying Algae To Ocean Acidification Differ Between Laboratory And Field Settings, Heather N. Page, Keisha D. Bahr, Tyler Cyronak, Elizabeth B. Jewett, Maggie D. Johnson, Sophie J. Mccoy Dec 2021

Responses Of Benthic Calcifying Algae To Ocean Acidification Differ Between Laboratory And Field Settings, Heather N. Page, Keisha D. Bahr, Tyler Cyronak, Elizabeth B. Jewett, Maggie D. Johnson, Sophie J. Mccoy

Marine & Environmental Sciences Faculty Articles

Accurately predicting the effects of ocean and coastal acidification on marine ecosystems requires understanding how responses scale from laboratory experiments to the natural world. Using benthic calcifying macroalgae as a model system, we performed a semi-quantitative synthesis to compare directional responses between laboratory experiments and field studies. Variability in ecological, spatial, and temporal scales across studies, and the disparity in the number of responses documented in laboratory and field settings, make direct comparisons difficult. Despite these differences, some responses, including community-level measurements, were consistent across laboratory and field studies. However, there were also mismatches in the directionality of many responses …


Element Contamination In Port Everglades – Preparing For Ecological Impacts, Laura White Dec 2021

Element Contamination In Port Everglades – Preparing For Ecological Impacts, Laura White

All HCAS Student Capstones, Theses, and Dissertations

Port dredging is of economic importance worldwide but its impacts to the marine environment through the remobilization of elemental contaminants are not well understood. A massive deepening and widening of Port Everglades, Florida, will begin in 2023. Contaminated sediment disturbed during the dredging process could be released and prove to be harmful to three coral reef tracks located beginning 1.5 miles away from the port. This study focused on identifying and quantifying 14 different trace elements: arsenic (As), cadmium (Cd), cobalt (Co), chromium (Cr), copper (Cu), mercury (Hg), lead (Pb), manganese (Mn), molybdenum (Mo), nickel (Ni), selenium (Se), tin (Sn), …


Impacts Of Deepwater Horizon On Fish And Fisheries: What Have We Learned About Resilience And Vulnerability In A Coupled Human-Natural System?, S.A. Murawski, C.B. Paris, Tracey Sutton, M. Cockrell, S. O'Farrell, J. Sanchirico, E. Chancellor, L. Perruso Dec 2021

Impacts Of Deepwater Horizon On Fish And Fisheries: What Have We Learned About Resilience And Vulnerability In A Coupled Human-Natural System?, S.A. Murawski, C.B. Paris, Tracey Sutton, M. Cockrell, S. O'Farrell, J. Sanchirico, E. Chancellor, L. Perruso

Marine & Environmental Sciences Faculty Proceedings, Presentations, Speeches, Lectures

The Deepwater Horizon (DWH) oil spill occurred in a region of the Gulf of Mexico (GoM) supporting abundant, diverse and valuable communities of fishes and fishers. The economy of the northern GoM is inextricably tied to the natural resource bases of the region (tourism, fishing, oil and gas, etc.) and thus the coupling between the human and ecological systems is tight and subject both feed-back and, to some extent, feed-forward controls. Management actions taken during the 87-day DWH spill incident included the closure of over 280,000 km2 of productive fishing area (about 1/3 of USA federal waters in the …


Validation Of Landsat 8 High Resolution Sea Surface Temperature Using Surfers, Quinton Vanhellemont, Robert J. W. Brewin, Philip J. Bresnahan, Tyler Cyronak Dec 2021

Validation Of Landsat 8 High Resolution Sea Surface Temperature Using Surfers, Quinton Vanhellemont, Robert J. W. Brewin, Philip J. Bresnahan, Tyler Cyronak

Marine & Environmental Sciences Faculty Articles

Nearshore coastal waters are highly dynamic in both space and time. They can be difficult to sample using conventional methods due to their shallow depth, tidal variability, and the presence of breaking waves. High resolution satellite sensors can be used to provide synoptic views of Surface Temperature (ST), but the performance of such ST products in the nearshore zone is poorly understood. Close to the shoreline, the ST pixels can be influenced by mixed composition of water and land, as a result of the sensor’s spatial resolution. This can cause thermal adjacency effects due to the highly different diurnal temperature …


On Inter-Organizational Trust, Control And Risk In Transboundary Fisheries Governance, Gordon M. Hickey, Hunter T. Snyder, Jasper R. Devries, Owen Temby Dec 2021

On Inter-Organizational Trust, Control And Risk In Transboundary Fisheries Governance, Gordon M. Hickey, Hunter T. Snyder, Jasper R. Devries, Owen Temby

School of Earth, Environmental, and Marine Sciences Faculty Publications and Presentations

Inter-organizational collaboration is often considered essential to transboundary fishery governance, due, in part, to the high levels of task interdependence, the remote and often treacherous conditions, and the limited levels of information available to any policy actor on resource status. In the high seas, Regional Fisheries Management Organizations (RFMOs) are responsible for sustainably managing highly migratory and straddling fish stocks through the implementation of ecosystem-based approaches and ensuring adequate inter-jurisdictional cooperation. A central question facing RFMO governance is therefore how to structure and sustain inter-organizational transboundary collaboration under high uncertainty? This paper presents the case of the North Atlantic Salmon …


Phytoplankton Community Response To Upwelling Events: Distribution And Abundance Investigated Using Genomic Methods, Sveinn V. Einarsson Dec 2021

Phytoplankton Community Response To Upwelling Events: Distribution And Abundance Investigated Using Genomic Methods, Sveinn V. Einarsson

OES Theses and Dissertations

Upwelling events are known to support blooms of phytoplankton, important primary producers at the base of the oceanic food web. Phytoplankton community structure changes in response to upwelling support higher trophic level growth and increased efficiency of carbon export from the euphotic zone. While these events occur globally, this study examined upwelling in coastal regions, where alongshore winds can drive Ekman transport and upwelling of deeper waters. The two upwelling regimes examined were the California Current System and the Alaskan Beaufort Sea. In the California Current System, the relative diatom community composition was examined using 18S sequencing to determine how …


Methodological Challenges In Studying Trust In Natural Resources Management, Antonia Sohns, Gordon M. Hickey, Jasper R. De Vries, Owen Temby Nov 2021

Methodological Challenges In Studying Trust In Natural Resources Management, Antonia Sohns, Gordon M. Hickey, Jasper R. De Vries, Owen Temby

School of Earth, Environmental, and Marine Sciences Faculty Publications and Presentations

Trust has been identified as a central characteristic of successful natural resource management (NRM), particularly in the context of implementing participatory approaches to stakeholder engagement. Trust is, however, a multi-dimensional and multi-level concept that is known to evolve recursively through time, challenging efforts to empirically measure its impact on collaboration in different NRM settings. In this communication we identify some of the challenges associated with conceptualizing and operationalizing trust in NRM field research, and pay particular attention to the inter-relationships between the concepts of trust, perceived risk and control due to their multidimensional and interacting roles in inter-organizational collaboration. The …


Binational Reflections On Pathways To Groundwater Security In The Mexico–United States Borderlands, Rosario Sanchez, José Agustin Breña-Naranjo, Alfonso Rivera, Randall T. Hanson, Antonio Hernández-Espriú, Rick J. Hogeboom, Anita Milman, Jude A. Benavides, Adrian Pedrozo-Acuña, Julio Cesar Soriano-Monzalvo, Sharon B. Megdal, Gabriel Eckstein, Laura Rodriguez Nov 2021

Binational Reflections On Pathways To Groundwater Security In The Mexico–United States Borderlands, Rosario Sanchez, José Agustin Breña-Naranjo, Alfonso Rivera, Randall T. Hanson, Antonio Hernández-Espriú, Rick J. Hogeboom, Anita Milman, Jude A. Benavides, Adrian Pedrozo-Acuña, Julio Cesar Soriano-Monzalvo, Sharon B. Megdal, Gabriel Eckstein, Laura Rodriguez

School of Earth, Environmental, and Marine Sciences Faculty Publications and Presentations

Shared groundwater resources between Mexico and the United States are facing unprecedented stressors. We reflect on how to improve water security for groundwater systems in the border region. Our reflection begins with the state of groundwater knowledge, and the challenges groundwater resources face from a physical, societal and institutional perspective. We conclude that the extent of ongoing cooperation frameworks, joint and remaining research efforts, from which alternative strategies can emerge, still need to be developed. The way forward offers a variety of cooperation models as the future offers rather complex, shared and multidisciplinary water challenges to the Mexico–US borderlands.


A Meshless Method With Radial Basis Function For Solving Unsaturated Flow In Heterogeneous Porous Media, Cheng-Yu Ku, Chih-Yu Liu, Wei-Po Huang, Jing-En Xiao Nov 2021

A Meshless Method With Radial Basis Function For Solving Unsaturated Flow In Heterogeneous Porous Media, Cheng-Yu Ku, Chih-Yu Liu, Wei-Po Huang, Jing-En Xiao

Journal of Marine Science and Technology

This paper presents a study for solving unsaturated flow in heterogeneous porous media using the meshless method with the radial basis function (RBF). For modeling the nonlinear hydrological process in unsaturated zone, an exponential model is introduced in the Richards equation such that we may obtain the linearized Richards equation. We adopt the multiquadric function as the RBF in the meshless method for solving the linearized Richards equation. For simulating the unsaturated flow problems in layered heterogeneous soils, the flux and the head must satisfy the continuity condition at the interface. Several examples are carried out for modeling the hydrological …


Dioxins Contamination In Sediment And Their Effect On Accumulation In The Portuguese Oyster (Crassostrea Angulata) And White Shrimp (Litopenaeus Vannamei), Yin-Yu Chen, Yu-Sheng Wu, Hsiang-Yin Chen, Zhen-Hao Liau, Fan-Hua Nan Nov 2021

Dioxins Contamination In Sediment And Their Effect On Accumulation In The Portuguese Oyster (Crassostrea Angulata) And White Shrimp (Litopenaeus Vannamei), Yin-Yu Chen, Yu-Sheng Wu, Hsiang-Yin Chen, Zhen-Hao Liau, Fan-Hua Nan

Journal of Marine Science and Technology

This research aims to realize whether the dioxin accumulation in the oyster and white shrimp which were cultured in the dioxin pollutant sediment. This presented evidence indicated that dioxin was detected in all experimental groups with high concentration accumulated in experiment animals. Observation of the concentration, the PCDD/F, 2,3,7,8-T4CDD was with high concentration in the sediment and declined with the time elapsed. Detection of the dioxin accumulated in the animal, the accumulative maximum amounts was in the oyster as 3746.16 (pg-TEQ/g d.w.) and in the shrimp as 705.44 (pg-TEQ/g d.w.). The detected amount of dioxin in the supernatant was quite …


Catch Rates And Distribution Pattern Of The Silky Shark, Carcharhinus Falciformis, Caught By The Taiwanese Large-Scale Longline Fishery In The Indian Ocean, Chia Yun Li, Xing-Han Wu, Shang Yin Vanson Liu, Sheng-Ping Wang, Wen-Pei Tsai Nov 2021

Catch Rates And Distribution Pattern Of The Silky Shark, Carcharhinus Falciformis, Caught By The Taiwanese Large-Scale Longline Fishery In The Indian Ocean, Chia Yun Li, Xing-Han Wu, Shang Yin Vanson Liu, Sheng-Ping Wang, Wen-Pei Tsai

Journal of Marine Science and Technology

The silky shark, Carcharhinus falciformis, is widely distributed in tropical and temperate waters, and it is a common bycatch species for tuna longline fisheries. This study examined the distribution of and presents relative abundance indices of the silky shark in the Indian Ocean by using logbook and observer data from the Taiwanese large-scale tuna longline fishery between 2005 and 2019. Due to the high zero catch rate, a zero-inflated negative binomial (ZINB) model was used to standardize catch per unit effort. Due to a lack of detailed targeting information, the fishery strategy was identified by using cluster analysis based on …


Accumulation And Bioavailability Of Heavy Metals (Cadmium, Chromium, Nickel, Lead And Zinc) In Water And Sediment Samples In The Musa Creek, Northwest Coasts Of The Persian Gulf, Saghafiankhoo Sedigheh, Battaleb-Looie Sedigheh, Amanipoor Hakimeh, Dravishi Khatooni Javad, Ghanemi Kamal Nov 2021

Accumulation And Bioavailability Of Heavy Metals (Cadmium, Chromium, Nickel, Lead And Zinc) In Water And Sediment Samples In The Musa Creek, Northwest Coasts Of The Persian Gulf, Saghafiankhoo Sedigheh, Battaleb-Looie Sedigheh, Amanipoor Hakimeh, Dravishi Khatooni Javad, Ghanemi Kamal

Journal of Marine Science and Technology

The current study aimed to investigate the total concentrations of heavy metals in water and sediment samples as well as their bioavailability in sediments of Musa Creek. Twenty samples including 10 sediments and 10 water samples were collected from 10 stations. The concentration of heavy metals was measured using inductively coupled plasma–mass spectrometry. The bioavailability of heavy metals was carried out by first step of Tessier sequential extraction method so called single extraction in the manuscript. The results showed that the mean concentrations of cadmium, chromium, nickel, and zinc in water samples was 0.17, 7.44, 43.80, and 8.85 µg/L, respectively. …


Using The Inverse Method To Investigate Flow Models For Mixed Convection Of Annular Finned Tube Heat Exchanger, Han-Taw Chen, Cheng-Hui You, Wei-Lun Hsu, Jiang-Ren Chang Nov 2021

Using The Inverse Method To Investigate Flow Models For Mixed Convection Of Annular Finned Tube Heat Exchanger, Han-Taw Chen, Cheng-Hui You, Wei-Lun Hsu, Jiang-Ren Chang

Journal of Marine Science and Technology

The inverse heat conduction method (IHCM) and three-dimensional (3D) computational fluid dynamic (CFD) in combination with are used to select the appropriate flow model and near-wall treatment for the mixed convection of the annular finned tube heat exchanger. Thus, the numerical results obtained by all k-ε models and near-wall treatments are yielded for 4 m/s ≤ Va ≤ 5 m/s. First, IHCM combined with is applied to estimate and Q values. The obtained estimates of and Q are used as reference values for CFD. The results show that the Tk and results obtained by the standard (STD) k-ε model with …


Parametric Analyses Of The Dynamic Response And Fatigue Life Of A Compliant Vertical Access Riser With Internal Flow, Fuheng Li, Haiyan Guo, Xiaomin Li, Zhen Liu, Honglu Gu, Peng Cui Nov 2021

Parametric Analyses Of The Dynamic Response And Fatigue Life Of A Compliant Vertical Access Riser With Internal Flow, Fuheng Li, Haiyan Guo, Xiaomin Li, Zhen Liu, Honglu Gu, Peng Cui

Journal of Marine Science and Technology

Subsea interventions on wellheads can be directly performed from a platform using a compliant vertical access riser (CVAR), thereby incurring tremendous economic benefits. The dynamic response and the fatigue damage of a CVAR subjected to regular waves are important for assessing its application feasibility. Therefore, a reasonable numerical model is presented for assessing the damage to a CVAR considering the internal flow using the slender rod theory. The finite element method combined with a Newmark-β scheme is employed to discretize the equations and update the time integration. The Palmgren-Miner rule is applied for fatigue life prediction, focusing on the wave-induced …


Prediction Of Remaining Useful Life Of Wind Turbine Shaft Bearings Using Machine Learning, Jinsiang Shaw, Bingjie Wu Nov 2021

Prediction Of Remaining Useful Life Of Wind Turbine Shaft Bearings Using Machine Learning, Jinsiang Shaw, Bingjie Wu

Journal of Marine Science and Technology

Wind turbines are a major trend in the current green energy market. Wind energy is abundant, and if utilized properly, can result in significant reductions in carbon emissions. Therefore, the development of wind power systems is urgently required. However, wind turbines are mainly built in unmanned areas. Regular inspections require substantial manpower and material resources, and doubts regarding the accuracy of the inspected data may occur. Therefore, it is necessary to establish an automatic diagnostic method for determining the remaining useful life (RUL) of a wind turbine to facilitate predictive maintenance. In this study, a multi-class support vector machine (SVM) …


Supply Chain Management For Superyacht Construction In Taiwan, Chun Pong Wong Nov 2021

Supply Chain Management For Superyacht Construction In Taiwan, Chun Pong Wong

Journal of Marine Science and Technology

In the last 20 years, Taiwan’s superyacht construction industry has performed well in the global market; however, numerous yacht builders still practice traditional supply chain management (SCM), which is often inefficient and regularly leads to time and cost overruns. This study aimed to answer two research questions: 1) what SCM challenges does the superyacht construction industry face? and 2) what SCM strategies and practices should be adopted to improve the efficacy and profitability of superyacht construction companies?

Numerous studies have explored supply chains (SCs) and SCM, but few have focused on the superyacht construction industry. Superyacht construction projects are highly …


The Impact Of Variable Curing Conditions On The Properties And Microstructures Of Mixtures Of Ground Granulated Blast Furnace Slag And Circulating Q1 Fluidized Bed Combustion Ash, Shao-Heng Hsieh, Wei-Chung Yeih, Ran Huang Nov 2021

The Impact Of Variable Curing Conditions On The Properties And Microstructures Of Mixtures Of Ground Granulated Blast Furnace Slag And Circulating Q1 Fluidized Bed Combustion Ash, Shao-Heng Hsieh, Wei-Chung Yeih, Ran Huang

Journal of Marine Science and Technology

The use of Portland cement, an important construction material, is encountering growing challenges because of its adverse environmental impacts. In this study, a new hydration system without Portland cement, which blends ground granulated blast furnace slag (GGBFS) and circulating fluidized bed combustion (CFBC) ash, was developed and tested. The variables included the effect of different types of CFBC ash, the mass ratios between CFBC ash and GGBFS, and different curing temperatures. The mortar properties were determined through the compressive strength test, absorption test, shrinkage test, X-ray diffraction, scanning electron microscopy, and energy-dispersive X-ray spectroscopy. The main results were as follows: …


A Marine Gis-Based Alert System To Prevent Vessels Collision With Offshore Platforms, Sheng-Long Kao, Ki-Yin Chang, Tai-Wen Hsu Nov 2021

A Marine Gis-Based Alert System To Prevent Vessels Collision With Offshore Platforms, Sheng-Long Kao, Ki-Yin Chang, Tai-Wen Hsu

Journal of Marine Science and Technology

How to effectively use an intelligent aid-to-navigation (AtoN) to prevent ships from accidentally colliding with offshore marine platforms (OMPs) is an important issue for maritime environment. This study proposes a novel collision alert system with three components to process Automatic Identification System (AIS) data in the cloud and broadcast AtoNs to ships in order to avoid collision with OMPs. The first component receives as input fuzzy linguistic variables (vessel size, relative speed, and approach distance) from the AIS data and calculates the radius of the guarding ring. The second component serves a Marine GIS (MGIS), where the system simulates the …


Peruvian Fur Seals As Archivists Of El Niño Southern Oscillation Effects, Mickie Rae Edwards, Susana Cardenas-Alayza, Michael Adkesson, Mya Daniels-Abdulahad, Amy Hirons Nov 2021

Peruvian Fur Seals As Archivists Of El Niño Southern Oscillation Effects, Mickie Rae Edwards, Susana Cardenas-Alayza, Michael Adkesson, Mya Daniels-Abdulahad, Amy Hirons

Marine & Environmental Sciences Faculty Articles

Peru’s coastal waters are characterized by significant environmental fluctuation due to periodic El Niño- La Niña- Southern Oscillation (ENSO) events. This variability results in ecosystem-wide food web changes which are reflected in the tissues of the Peruvian fur seal (Arctocephalus australis). Stable isotope ratios (δ13C and δ15N) in Peruvian fur seal vibrissae (whiskers) are used to infer temporal primary production and dietary variations in individuals. Sea surface temperature anomaly (SSTA) recordings from the Niño 1+2 Index region captured corresponding ENSO conditions. Fluctuations in δ15N values were correlated to SSTA records, indicating that …


First Ecological Characterization Of Whip Black Coral Assemblages (Hexacorallia: Antipatharia) In The Easter Island Ecoregion, Southeastern Pacific, Jan M. Tapia-Guerra, Cynthia M. Asorey, Erin E. Easton, Daniel Wagner, Matthias Gorny, Javier Sellanes Nov 2021

First Ecological Characterization Of Whip Black Coral Assemblages (Hexacorallia: Antipatharia) In The Easter Island Ecoregion, Southeastern Pacific, Jan M. Tapia-Guerra, Cynthia M. Asorey, Erin E. Easton, Daniel Wagner, Matthias Gorny, Javier Sellanes

School of Earth, Environmental, and Marine Sciences Faculty Publications and Presentations

One of the main priorities of marine scientific research is to provide practical information and guidance for biodiversity conservation and management. In this context, the identification of key and fragile habitat-forming species is particularly important. Despite their ecological importance, whip corals in the order Antipatharia remain poorly studied around the world, and especially in the South Pacific. During recent expeditions to explore mesophotic and deep benthic habitats around Rapa Nui (Easter Island), dense assemblages of whip black corals were observed in situ. We here report the first detailed description of the distribution and abundance of these black coral assemblages …


Nutrient Cycling In Tropical And Temperate Coastal Waters: Is Latitude Making A Difference?, Christian Lønborg, Moritz Müller, Edward C. V. Butler, Shan Jiang, Seng Keat Ooi, Dieu Huong Trinh, Pui Yee Wong, Suryati M. Ali, Chun Cui, Wee Boon Siong, Erik S. Yando, Daniel A. Friess, Judith A. Rosentreter, Bradley D. Eyre, Patrick Martin Nov 2021

Nutrient Cycling In Tropical And Temperate Coastal Waters: Is Latitude Making A Difference?, Christian Lønborg, Moritz Müller, Edward C. V. Butler, Shan Jiang, Seng Keat Ooi, Dieu Huong Trinh, Pui Yee Wong, Suryati M. Ali, Chun Cui, Wee Boon Siong, Erik S. Yando, Daniel A. Friess, Judith A. Rosentreter, Bradley D. Eyre, Patrick Martin

Biological Sciences Faculty Publications

Tropical coastal waters are highly dynamic and amongst the most biogeochemically active zones in the ocean. This review compares nitrogen (N) and phosphorus (P) cycles in temperate and tropical coastal waters. We review the literature to identify major similarities and differences between these two regions, specifically with regards to the impact of environmental factors (temperature, sunlight), riverine inputs, groundwater, lateral fluxes, atmospheric deposition, nitrogen fixation, organic nutrient cycling, primary production, respiration, sedimentary burial, denitrification and anammox. Overall, there are some similarities but also key differences in nutrient cycling, with differences relating mainly to temperature, sunlight, and precipitation amounts and patterns. …


Overfishing Drives Over One-Third Of All Sharks And Rays Toward A Global Extinction Crisis, Nicholas K. Dulvy, Nathan Pacoureau, Cassandra L. Rigby, Riley A. Pollom, Rima W. Jabado, David A. Ebert, Brittany Finucci, Caroline M. Pollock, Jessica Cheok, Danielle H. Derrick, Katelyn B. Herman, C. Samantha Sherman, Wade J. Vanderwright, Julia M. Lawson, Rachel H.L. Walls, John K. Carlson, Patricia Charvet, Kinattumkara K. Bineesh, Daniel Fernando, Gina M. Ralph, Jay H. Matsushiba, Craig Hilton-Taylor, Sonja V. Fordham, Colin A. Simpfendorfer Nov 2021

Overfishing Drives Over One-Third Of All Sharks And Rays Toward A Global Extinction Crisis, Nicholas K. Dulvy, Nathan Pacoureau, Cassandra L. Rigby, Riley A. Pollom, Rima W. Jabado, David A. Ebert, Brittany Finucci, Caroline M. Pollock, Jessica Cheok, Danielle H. Derrick, Katelyn B. Herman, C. Samantha Sherman, Wade J. Vanderwright, Julia M. Lawson, Rachel H.L. Walls, John K. Carlson, Patricia Charvet, Kinattumkara K. Bineesh, Daniel Fernando, Gina M. Ralph, Jay H. Matsushiba, Craig Hilton-Taylor, Sonja V. Fordham, Colin A. Simpfendorfer

Biological Sciences Faculty Publications

The scale and drivers of marine biodiversity loss are being revealed by the International Union for Conservation of Nature (IUCN) Red List assessment process. We present the first global reassessment of 1,199 species in Class Chondrichthyes-sharks, rays, and chimeras. The first global assessment (in 2014) concluded that one-quarter (24%) of species were threatened. Now, 391 (32.6%) species are threatened with extinction. When this percentage of threat is applied to Data Deficient species, more than one-third (37.5%) of chondrichthyans are estimated to be threatened, with much of this change resulting from new information. Three species are Critically Endangered (Possibly Extinct), representing …


Disentangling Diverse Responses To Climate Change Among Global Marine Ecosystem Models, Ryan F. Heneghan, Eric Galbraith, Julia L. Blanchard, Cheryl S. Harrison, Nicolas Barrier, Catherine Bulman, William Cheung, Marta Coli, Tyler D. Eddy, Maite Erauskin-Extramiana Nov 2021

Disentangling Diverse Responses To Climate Change Among Global Marine Ecosystem Models, Ryan F. Heneghan, Eric Galbraith, Julia L. Blanchard, Cheryl S. Harrison, Nicolas Barrier, Catherine Bulman, William Cheung, Marta Coli, Tyler D. Eddy, Maite Erauskin-Extramiana

School of Earth, Environmental, and Marine Sciences Faculty Publications and Presentations

Climate change is warming the ocean and impacting lower trophic level (LTL) organisms. Marine ecosystem models can provide estimates of how these changes will propagate to larger animals and impact societal services such as fisheries, but at present these estimates vary widely. A better understanding of what drives this inter-model variation will improve our ability to project fisheries and other ecosystem services into the future, while also helping to identify uncertainties in process understanding. Here, we explore the mechanisms that underlie the diversity of responses to changes in temperature and LTLs in eight global marine ecosystem models from the Fisheries …


Next-Generation Ensemble Projections Reveal Higher Climate Risks For Marine Ecosystems, Derek P. Tittensor, Camilla Novaglio, Cheryl S. Harrison, Ryan F. Heneghan, Nicolas Barrier, Daniele Bianchi, Laurent Bopp, Andrea Bryndum-Buchholz, Gregory L. Britten, Matthias Büchner Nov 2021

Next-Generation Ensemble Projections Reveal Higher Climate Risks For Marine Ecosystems, Derek P. Tittensor, Camilla Novaglio, Cheryl S. Harrison, Ryan F. Heneghan, Nicolas Barrier, Daniele Bianchi, Laurent Bopp, Andrea Bryndum-Buchholz, Gregory L. Britten, Matthias Büchner

School of Earth, Environmental, and Marine Sciences Faculty Publications and Presentations

Projections of climate change impacts on marine ecosystems have revealed long-term declines in global marine animal biomass and unevenly distributed impacts on fisheries. Here we apply an enhanced suite of global marine ecosystem models from the Fisheries and Marine Ecosystem Model Intercomparison Project (Fish-MIP), forced by new-generation Earth system model outputs from Phase 6 of the Coupled Model Intercomparison Project (CMIP6), to provide insights into how projected climate change will affect future ocean ecosystems. Compared with the previous generation CMIP5-forced Fish-MIP ensemble, the new ensemble ecosystem simulations show a greater decline in mean global ocean animal biomass under both strong-mitigation …


Climate-Assisted Persistence Of Tropical Fish Vagrants In Temperate Marine Ecosystems, Laura Gajdzik, Thomas M. Decarlo, Adam Koziol, Mahsa Mousavi-Derazmahalleh, Megan Coghlan, Matthew W. Power, Michael Bunce, David Fairclough, Michael J. Travers, Glenn I. Moore, Joseph D. Dibattista Oct 2021

Climate-Assisted Persistence Of Tropical Fish Vagrants In Temperate Marine Ecosystems, Laura Gajdzik, Thomas M. Decarlo, Adam Koziol, Mahsa Mousavi-Derazmahalleh, Megan Coghlan, Matthew W. Power, Michael Bunce, David Fairclough, Michael J. Travers, Glenn I. Moore, Joseph D. Dibattista

Fisheries Research Articles

Rising temperatures and extreme climate events are propelling tropical species into temperate marine ecosystems, but not all species can persist. Here, we used the heatwave-driven expatriation of tropical Black Rabbitfish (Siganus fuscescens) to the temperate environments of Western Australia to assess the ecological and evolutionary mechanisms that may entail their persistence. Population genomic assays for this rabbitfish indicated little genetic differentiation between tropical residents and vagrants to temperate environments due to high migration rates, which were likely enhanced by the marine heatwave. DNA metabarcoding revealed a diverse diet for this species based on phytoplankton and algae, as well …


Moving Conferences Online: Lessons Learned From An International Virtual Meeting, Paris V. Stefanoudis, Leann M. Biancani, Sergio Cambronero-Solano, Malcolm R. Clark, Jonathan T. Copley, Erin E. Easton, Franziska Elmer, Steven H. D. Haddock, Santiago Herrera, Ilysa S. Iglesias Oct 2021

Moving Conferences Online: Lessons Learned From An International Virtual Meeting, Paris V. Stefanoudis, Leann M. Biancani, Sergio Cambronero-Solano, Malcolm R. Clark, Jonathan T. Copley, Erin E. Easton, Franziska Elmer, Steven H. D. Haddock, Santiago Herrera, Ilysa S. Iglesias

School of Earth, Environmental, and Marine Sciences Faculty Publications and Presentations

We consider the opportunities and challenges associated with organizing a conference online, using a case study of a medium-sized (approx. 400 participants) international conference held virtually in August 2020. In addition, we present quantifiable evidence of the participants’ experience using the results from an online post-conference questionnaire. Although the virtual meeting was not able to replicate the in-person experience in some aspects (e.g. less engagement between participants) the overwhelming majority of respondents found the meeting an enjoyable experience and would join similar events again. Notably, there was a strong desire for future inperson meetings to have at least some online …


A Drone-Based Survey For Large, Basking Freshwater Turtle Species, Amy P. Bogolin, Drew R. Davis, Richard Kline, Abdullah Rahman Oct 2021

A Drone-Based Survey For Large, Basking Freshwater Turtle Species, Amy P. Bogolin, Drew R. Davis, Richard Kline, Abdullah Rahman

School of Earth, Environmental, and Marine Sciences Faculty Publications and Presentations

Conservation concerns are increasing for numerous freshwater turtle species, including Pseudemys gorzugi, which has led to a call for more research. However, traditional sampling methodologies are often time consuming, labor intensive, and invasive, restricting the amount of data that can be collected. Biases of traditional sampling methods can further impair the quality of the data collected, and these shortfalls may discourage their use. The use of unmanned aerial vehicles (UAVs, drones) for conducting wildlife surveys has recently demonstrated the potential to bridge gaps in data collection by offering a less labor intensive, minimally invasive, and more efficient process. Photographs and …


Land-Use Dynamics Associated With Mangrove Deforestation For Aquaculture And The Subsequent Abandonment Of Ponds, Aslan Aslan, Abdullah F. Rahman, Scott M. Robeson, Muhammad Ilman Oct 2021

Land-Use Dynamics Associated With Mangrove Deforestation For Aquaculture And The Subsequent Abandonment Of Ponds, Aslan Aslan, Abdullah F. Rahman, Scott M. Robeson, Muhammad Ilman

School of Earth, Environmental, and Marine Sciences Faculty Publications and Presentations

Highlights

  • SAR data is useful for tracking dynamic changes in mangrove ecosystem.

  • Time series SAR data can be used to estimate lifespan of pond.

  • During 22+ years, over half of the mangrove forest in Mahakam Delta has been converted to aquaculture.

Abstract

The objective of this study was to evaluate the spatiotemporal dynamics of large area mangrove deforestation, aquaculture pond building, and the subsequent abandonment of ponds in a large delta in Indonesia, namely the Mahakam Delta. So, we developed and applied a novel methodology for exploring the lifespan of aquaculture ponds. Using historical multispectral and radar data, the …


Complete Mitochondrial Genomes Of Two Species Of Stichopathes Brook, 1889 (Hexacorallia: Antipatharia: Antipathidae) From Rapa Nui (Easter Island), Cynthia M. Asorey, Javier Sellanes, Daniel Wagner, Erin E. Easton Oct 2021

Complete Mitochondrial Genomes Of Two Species Of Stichopathes Brook, 1889 (Hexacorallia: Antipatharia: Antipathidae) From Rapa Nui (Easter Island), Cynthia M. Asorey, Javier Sellanes, Daniel Wagner, Erin E. Easton

School of Earth, Environmental, and Marine Sciences Faculty Publications and Presentations

We report the complete mitochondrial genomes of two antipatharian species, Stichopathes sp. SCBUCN-8849 and Stichopathes sp. SCBUCN-8850, collected between 120 and 180 m depth off Rapa Nui (∼ −27.1°, −109.4°). The size of the two mitogenomes are 20,389 bp (29.0% A, 15.2% C, 19.9% G, and 35.9% T) and 20,463 bp (29.0% A, 15.3% C, 19.9% G, and 35.8% T), respectively. Both mitogenomes have the classic Hexacorallia gene content of 13 protein-coding, two rRNA, and two tRNA genes plus a COX1 intron with embedded HEG as found in the Antipathidae and other antipatharian families.