Physical Sciences and Mathematics Commons^™

Flexible Gating Of Contextual Influences In Natural Vision, Odelia Schwartz

Mathematics Colloquium Series

An appealing hypothesis suggests that neurons represent inputs in a coordinate system that is matched to the statistical structure of images in the natural environment. I discuss theoretical work on unsupervised learning of statistical regularities in natural images. In the model, Bayesian inference amounts to a generalized form of divisive normalization, a canonical computation that has been implicated in many neural areas. In our framework, divisive normalization is flexible: it is recruited only when the image is inferred to contain dependencies, and muted otherwise. I particularly focus on recent work in which we have applied this approach to understanding spatial …

Strip Adaptive Cluster Sampling With Application To Cave Crickets, Kurt Lewis Helf

National Cave and Karst Management Symposia

No abstract provided.

The Extirpation Of A Population Of The Endangered Illinois Cave Amphipod (Gammarus Acherondytes) By An Exotic Species: The Wednesday Cave Debacle, Julian J. Lewis, Salisa L. Lewis

National Cave and Karst Management Symposia

No abstract provided.

Karst Wreckage: Subterranean Fauna As Collateral Damage, Julian J. Lewis, Salisa L. Lewis

National Cave and Karst Management Symposia

No abstract provided.

White-Nose Syndrome Response At Mammoth Cave National Park, Rickard S. Toomey

National Cave and Karst Management Symposia

No abstract provided.

Genus-Wide Assessment Of Bactrurus (Amphipoda: Crangonyctidae) Informs Conservation And Management Of Groundwater Habitats, Matthew L. Niemiller, Steven J. Taylor

National Cave and Karst Management Symposia

No abstract provided.

Monitoring In-Cave Resources With Reduced Impact And Increased Quantitative Capacity: Developing Photogrammetry Methodologies For In Cave Environments, Robyn L. Henderek, John R. Wood, Benjamin W. Tobin

National Cave and Karst Management Symposia

No abstract provided.

Managing The Spread Of Pseudogymnoascus Destructans And Conserving Bats Threatened By White-Nose Syndrome In North America, Jeremy Coleman, Jonathan D. Reichard, Richard Geboy, Christopher Servheen, Christina Kocer, Mike Armstrong

National Cave and Karst Management Symposia

No abstract provided.

Seeps And Springs At A Platteville “Observatory” On The River Bluffs, Bj Bonin, Greg Brick, Julia R. Steenberg

Sinkhole Conference 2015

Residential building construction along the Mississippi River bluffs in the 1970s created a unique enclosed outcrop of the Late Ordovician Platteville Formation at Lilydale, Minnesota. This outcrop was examined in early 2013 after a newly-formed spring flooded an elevator shaft the previous year, drawing attention to the foundation conditions. The Lexington Riverside property is a six story condominium complex constructed within the top of the bluff. A two-level underground parking garage was built into the bluff. Bedrock was mechanically excavated to accommodate the construction of the building, creating an unweathered rock surface. The space between the structure and the excavated …

Learning From Lionfish: Modeling Marine Invaded Systems, Matthew Johnston

Mathematics Colloquium Series

Simulating marine invaded systems requires broad consideration of physical oceanographic processes, such as ocean circulation patterns and temperature, and biological traits of the invader, such as their reproductive strategy and tolerances to their environment. Through this understanding of baseline biological and oceanographic function, models can be developed in order to forecast the incursion patterns of marine invasive species - helpful both to predict their spread as well as forewarn of impacts. To facilitate this understanding, computer simulation is useful in order to quickly and efficiently assimilate large biological and oceanographic datasets into digestible products. Data derived from such simulations are …

A Machine Learning Approach To Post-Market Surveillance Of Medical Devices, Jonathan Bates, Shu-Xia Li, Craig Parzynski, Ronald Coifman, Harlan Krumholz, Joseph Ross

Yale Day of Data

Post-market surveillance is a collection of processes and activities used by product manufacturers and regulators, such as the U.S. Food and Drug Administration (FDA) to monitor the safety and effectiveness of medical devices once they are available for use “on the market”. These activities are designed to generate information to identify poorly performing devices and other safety problems, accurately characterize real-world device performance and clinical outcomes, and facilitate the development of new devices, or new uses for existing devices. Typically, a device is monitored by comparing adverse events in the exposed population to a matched unexposed population. This research considers …

K-Mer Analysis On Developmental And Housekeeping Enhancer Peaks, Yunsi Yang, Anurag Sethi, Mark Gerstein

Yale Day of Data

The regulation of gene expression involves interaction between transcriptional enhancers and core promoters. However, the separation between developmental and housekeeping gene regulation remains unknown. Here, we present a method to detect if different core promoters exhibit specificity to certain enhancers within massively parallel assays for enhancer detection. We use k-mers of various length (3-8bp) as sequence features and compare k-mer frequencies between developmental and housekeeping enhancers. This method shows promoter specificity of enhancers in D. melanogaster.

Forecasting The Big Picture: Arctic Ecosystems, Climate Change, Shipping & Fisheries, Mary S. Wisz

ShipArc 2015 Conference

No abstract provided.

Optical Emission Spectroscopy Diagnostics Of Cold Plasmas For Food Sterilization, Abhijit Jassem, Michael Lauria, Russell Brayfield Ii, Kevin M. Keener, Allen L. Garner

The Summer Undergraduate Research Fellowship (SURF) Symposium

There is a growing need for economical, effective, and safe methods of sterilizing fresh produce. The most common method is a chlorine wash, which is expensive and may introduce carcinogens. High voltage cold atmospheric pressure plasmas are a promising solution that has demonstrated a germicidal effect; however, the responsible chemical mechanisms and reaction pathways are not fully understood. To elucidate this chemistry, we used optical emission spectroscopy to measure the species produced in the plasma generated by a 60 Hz pulsed dielectric barrier discharge in a plastic box containing various fill gases (He, N₂, CO₂, dry …

Bio-Inspired Composite Hydrogels For Osteochondral Regenerative Engineering, Grant N. Gellert, Liangju Kuang, Chunhui Jiang, Nur P. Damayanti, Joseph Irudayaraj, Meng Deng

The Summer Undergraduate Research Fellowship (SURF) Symposium

Treatment of osteochondral defects encompassing injury or degeneration to both the articular cartilage as well as the underlying subchondral bone presents a significant medical challenge. Current treatment options including autografts and allografts suffer from limited availability and risk of immunogenicity, respectively. The long term goal of this work is to develop an integrated scaffold system for treatment of osteochondral defects via in situ regeneration of bone, cartilage and the bone-cartilage interface. Hydrogels composed of polymer networks swollen in water provide an attractive biomaterial platform for regeneration of cartilage. In the present study, we have developed a novel composite hydrogel consisting …

Deconstructing Cation-Pi Interactions: Understanding The Binding Energies Involved With Metal And Aromatic Amino Acid Residues, Jen E. Werner, Lyudmila V. Slipchenko, Yen Bui

The Summer Undergraduate Research Fellowship (SURF) Symposium

The Effective Fragment Potential (EFP) method is a computationally efficient technique for describing non-covalent interactions, such as hydrogen bonding and van der Waals forces. Cation-pi interactions are a type of non-covalent interactions and are thought to be important in biological processes, such as permittivity of ion channels. The goal of our work is to establish that the EFP method reliably describes the strength, directionality, and composition of cation-pi interactions. Optimal geometries were found for a series of biologically relevant cations (K⁺, Li⁺, Na⁺, Ca²⁺, and Mg²⁺) and aryl moieties appearing …

Effect Of Oil And Dispersants From The Gulf Of Mexico On Estuarine Fish Species, Nancy D. Denslow, Olanike K. Adeyemo, Kevin J. Kroll

21st International Conference on Environmental Indicators (ICEI 2015)

No abstract provided.

Agricultural Soil Profile Temperature In A Hot And Arid Ecosystem: Can It Be A Useful Indicator Of Environmental Change?, Abdirashid Elmi

21st International Conference on Environmental Indicators (ICEI 2015)

No abstract provided.

In Vivo Mutagenic And Oxidative Stress Modulatory Effects Of Fenthion In Freshwater African Catfish Clarias Garienpinus (Burchell 1882), Christopher D. Nwani, E. O. Ogueji, P. S. Onas

21st International Conference on Environmental Indicators (ICEI 2015)

No abstract provided.

Histopathological Studies And Heavy Metals Accumulation In Water, Sediment And Chrysichthys Nigrodigitatus At The Agility Iarea Of The Ogun River, S. O. Ayoola, G. Ahamefule, H. O. Omogoriola

21st International Conference on Environmental Indicators (ICEI 2015)

No abstract provided.

Evaluation Of Metals That Are Potentially Toxic To Agricultural Surface Soils, Using Statistical Analysis, In Northwestern Saudi Arabia, Nassir Al-Arifi

21st International Conference on Environmental Indicators (ICEI 2015)

No abstract provided.

Climate Warming Reduces Essential Fatty Acid Production In Algae, Michael T. Arts, Stefanie M. Hixson, Samantha Mercieca

21st International Conference on Environmental Indicators (ICEI 2015)

No abstract provided.

Binocular 3d Motion Perception As Bayesian Inference, Martin Lages, Suzanne Heron

MODVIS Workshop

The human visual system encodes monocular motion and binocular disparity input before it is integrated into a single 3D percept. Here we propose a geometric-statistical model of human 3D motion perception that solves the aperture problem in 3D by assuming that (i) velocity constraints arise from inverse projection of local 2D velocity constraints in a binocular viewing geometry, (ii) noise from monocular motion and binocular disparity processing is independent, and (iii) slower motions are more likely to occur than faster ones. In two experiments we found that instantiation of this Bayesian model can explain perceived 3D line motion direction under …

Object Recognition And Visual Search With A Physiologically Grounded Model Of Visual Attention, Frederik Beuth, Fred H. Hamker

MODVIS Workshop

Visual attention models can explain a rich set of physiological data (Reynolds & Heeger, 2009, Neuron), but can rarely link these findings to real-world tasks. Here, we would like to narrow this gap with a novel, physiologically grounded model of visual attention by demonstrating its objects recognition abilities in noisy scenes.

To base the model on physiological data, we used a recently developed microcircuit model of visual attention (Beuth & Hamker, in revision, Vision Res) which explains a large set of attention experiments, e.g. biased competition, modulation of contrast response functions, tuning curves, and surround suppression. Objects are represented by …

Modeling Visual Features To Recognize Biological Motion: A Developmental Approach, Giulio Sandini, Nicoletta Noceti, Alessia Vignolo, Alessandra Sciutti, Francesco Rea, Alessandro Verri, Francesca Odone

MODVIS Workshop

In this work we deal with the problem of designing and developing computational vision models – comparable to the early stages of the human development – using coarse low-level information.

More specifically, we consider a binary classification setting to characterize biological movements with respect to non-biological dynamic events. To this purpose, our model builds on top of the optical flow estimation, and abstract the representation to simulate the limited amount of visual information available at birth. We take inspiration from known biological motion regularities explained by the Two-Thirds Power Law, and design a motion representation that includes different low-level features, …

Complementary Effect Of Electrical And Inhibitory Coupling In Bursting Synchronization, Kevin Daley

Georgia State Undergraduate Research Conference

gsurc 2015

Quantitative And Qualitative Stability Analysis Of Polyrhythmic Circuits, Drake Knapper

Georgia State Undergraduate Research Conference

No abstract provided.

14th Annual Undergraduate Student Symposium, Farquhar Honors College

Undergraduate Student Symposium

The Undergraduate Student Symposium, sponsored by the Farquhar College of Arts and Sciences, presents student projects through presentations, papers, and poster displays. The event serves as a “showcase” demonstrating the outstanding scholarship of undergraduate students at NSU. The symposium is open to undergraduate students from all disciplines. Projects cover areas of student scholarship ranging from the experimental and the applied to the computational, theoretical, artistic, and literary. They are taken from class assignments and independent projects. The projects do not have to be complete; presentations can represent any stage in the concept’s evolution, from proposal and literature review to fully …

2015 Symposium Overview, Cedarville University

The Research and Scholarship Symposium (2013-2019)

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Using A Generalized Linear Mixed Model Framework To Account For Spatial Variability In A Comparison Of Orchard Sprayer Efficacy, William J. Price, Bahman Shafii, Don Morishita

Conference on Applied Statistics in Agriculture

Uniform application of pesticides in vineyard and orchard systems can be difficult to achieve due to variability in the density and structure of the crop canopy. Depending on the equipment used and environmental conditions, applications can result in poor spray coverage, spray drift, and wasted spray which, in turn, are manifested as a combination of poor pesticide efficacy, economic losses and potential environmental problems for the grower. A study was therefore designed and carried out to test new sprayer equipment aimed at addressing these issues. Statistically, the study presented a unique replicated three dimensional spatial design which captured response variability …