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Full-Text Articles in Physical Sciences and Mathematics

Impact Of Bythotrephes Invasion On Zooplankton Communities In Acid-Damaged And Recovered Lakes On The Boreal Shield, Angela L. Strecker, Shelley E. Arnott Oct 2005

Impact Of Bythotrephes Invasion On Zooplankton Communities In Acid-Damaged And Recovered Lakes On The Boreal Shield, Angela L. Strecker, Shelley E. Arnott

Environmental Science and Management Faculty Publications and Presentations

Invasive species introductions into freshwater ecosystems have had a multitude of effects on aquatic communities. Few studies, however, have directly compared the impact of an invader on communities with contrasting structure. Historically high levels and subsequent reductions of acid deposition have produced landscapes of lakes of varying acidity and zooplankton communitystructure. We conducted a 30-day enclosure experiment in Killarney Provincial Park, Ontario, Canada, to test the effects ofBythotrephes longimanus, an invasive invertebrate predator, on two contrasting zooplankton communities at different stages of recovery from acidification: recovered and acid damaged. Bythotrephes significantly decreased zooplankton biomass and abundance in both communities but …


Street Trees In The Urban Forest Canopy: Portland, Oregon, Joseph Poracsky, David Banis Aug 2005

Street Trees In The Urban Forest Canopy: Portland, Oregon, Joseph Poracsky, David Banis

Geography Faculty Publications and Presentations

Attempts to identify the contribution of street trees to the overall urban forest of a city have been rare and lack consensus on how to measure that contribution – percentage of trees, percentage of canopy cover, or percentage of leaf area. The actual numeric values presented in the literature also vary over a broad range and often are based on estimates, extrapolations from aggregated data, or simply stated with no empirical data referenced. This study was undertaken to evaluate the contribution of street trees to canopy in Portland, Oregon. The study involved both visual and digital analysis of multi-band aerial …


Biotic Resistance To Invasion: Native Predator Limits Abundance And Distribution Of An Introduced Crab, Catherine E. De Rivera, Greg M. Ruiz, Anson Hines, Paul Jivoff Jan 2005

Biotic Resistance To Invasion: Native Predator Limits Abundance And Distribution Of An Introduced Crab, Catherine E. De Rivera, Greg M. Ruiz, Anson Hines, Paul Jivoff

Environmental Science and Management Faculty Publications and Presentations

Introduced species frequently escape the natural enemies (predators, competitors, and parasites) that limit their distribution and abundance in the native range. This reduction in native predators, competitors, and parasites may result in ecological release in the introduced range. However, biological interactions also can limit the establishment and spread of nonnative populations. The extent to which such biotic resistance occurs is poorly resolved, especially for marine ecosystems. Here we test whether a native predator, the blue crab Callinectes sapidus, affects the abundance and geographic range of the introduced European green crab Carcinus maenas in eastern North America. Both crab species …


Response Of Sagebrush Steppe Species To Elevated Co2 And Soil Temperature, Melissa S. Lucash, Blake Farnsworth, William E. Winner Jan 2005

Response Of Sagebrush Steppe Species To Elevated Co2 And Soil Temperature, Melissa S. Lucash, Blake Farnsworth, William E. Winner

Environmental Science and Management Faculty Publications and Presentations

Elevated atmospheric CO2 may cause long-term changes in the productivity and species composition of the sagebrush steppe. Few studies, however, have evaluated the effects of increased CO2 on growth and physiology of species important to this ecosystem. Since the response of plants to elevated CO2 may be limited by environmental factors, soil temperature was also examined to determine if low soil temperatures limit CO2 response. To determine how CO2 and soil temperature affect the growth of species native to the sagebrush steppe, bottlebrush squirreltail [Elymus elymoides (Raf.) Swezey], Thurber needlegrass (Stipa thurberiana Piper), …


The Subsystems Approach To Genome Annotation And Its Use In The Project To Annotate 1000 Genomes, Ross Overbeek, Tadhg Begley, Ralph M. Butler, Jomuna V. Choudhuri, Han-Yu Chuang, Matthew Cohoon, Valérie De Crécy-Lagard, Naryttza Diaz, Terry Disz, Robert Edwards, Michael Fonstein, Ed D. Frank, Svetlana Gerdes, Elizabeth M. Glass, Alexander Goesmann, Andrew Hanson, Dirk Iwata-Reuyl, Roy Jensen, Neema Jamshidi, Lutz Krause, Michael Kubal, Niels Larsen, Burkhard Linke, Alice C. Mchardy, Folker Meyer, Heiko Neuweger, Gary Olsen, Robert Olson, Andrei Osterman, Vasiliy Portnoy, Gordon D. Pusch, Dmitry A. Rodionov, Christian Rückert, Jason Steiner, Rick Stevens, Ines Thiele, Olga Vassieva, Yuzhen Ye, Olga Zagnitko, Veronika Vonstein Jan 2005

The Subsystems Approach To Genome Annotation And Its Use In The Project To Annotate 1000 Genomes, Ross Overbeek, Tadhg Begley, Ralph M. Butler, Jomuna V. Choudhuri, Han-Yu Chuang, Matthew Cohoon, Valérie De Crécy-Lagard, Naryttza Diaz, Terry Disz, Robert Edwards, Michael Fonstein, Ed D. Frank, Svetlana Gerdes, Elizabeth M. Glass, Alexander Goesmann, Andrew Hanson, Dirk Iwata-Reuyl, Roy Jensen, Neema Jamshidi, Lutz Krause, Michael Kubal, Niels Larsen, Burkhard Linke, Alice C. Mchardy, Folker Meyer, Heiko Neuweger, Gary Olsen, Robert Olson, Andrei Osterman, Vasiliy Portnoy, Gordon D. Pusch, Dmitry A. Rodionov, Christian Rückert, Jason Steiner, Rick Stevens, Ines Thiele, Olga Vassieva, Yuzhen Ye, Olga Zagnitko, Veronika Vonstein

Chemistry Faculty Publications and Presentations

The release of the 1000th complete microbial genome will occur in the next two to three years. In anticipation of this milestone, the Fellowship for Interpretation of Genomes (FIG) launched the Project to Annotate 1000 Genomes. The project is built around the principle that the key to improved accuracy in high through put annotation technology is to have experts annotate single subsystems over the complete collection of genomes, rather than having an annotation expert attempt to annotate all of the genes in a single genome. Using the subsystems approach, all of the genes implementing the subsystem are analyzed by …