Physical Sciences and Mathematics Commons^™

Suspended Particulate Matter Longitudinal Survey – Currituck Sound, Nc; Oct 13-15, 2015, Cruise: Cs151013-15, Chsd Stations: S5566-5587, Grace M. Massey, Kelsey A. Fall

Data

Dataset consists of water column and bottom burst data, PICS, and light attenuation data collected as part of a 21 station longitudinal survey of the Currituck Sound, NC along a ~60 km transect northward from the Wright Memorial Bridge.

Re-Emergence Of The Harmful Algal Bloom Species Alexandrium Monilatum In The Chesapeake Bay: Assessing Bloom Dynamics And Potential Health Impacts, Sarah K.D. Pease, Kimberly S. Reece, Wolfgang K. Vogelbein

Presentations

Effective management of harmful algal blooms (HABs) within a region requires an understanding of species-specific HAB spatial and temporal distributions, bloom dynamics, as well as potential health impacts. In 2007, the southern Chesapeake Bay witnessed its first blooms of the HAB species Alexandrium monilatum. Since then, A. monilatum has bloomed in the region almost annually. A. monilatum produces the toxin ‘goniodomin A’ and is suspected in local mass mortalities of oyster larvae (Crassostrea virginica) grown for aquaculture and restoration projects. Representatives from Virginia’s multimillion dollar oyster aquaculture industry recently expressed great concern over A. monilatum impacts to their businesses; field …

Diel Vertical Distribution Patterns Of Zooplankton Along The Western Antarctic Peninsula, Patricia S. Thibodeau, John A. Conroy, Deborah K. Steinberg

Presentations

The Western Antarctic Peninsula (WAP) is a region that has undergone significant change over the past several decades due to unprecedented increases sea surface temperature and decreases in sea ice cover. The ongoing Palmer Antarctica Long-Term Ecological Research (PAL LTER) study shows that these environmental changes are significantly affecting the marine pelagic ecosystem along the WAP. The goal of this study was to analyze diel vertical distribution patterns of zooplankton along the WAP.

Efficacy Of Sediment Remediation Efforts On Pah Contaminant Flux Via Porewater Advection At The Sediment-Surface Water Interface, Julie L. Krask, Michael A. Unger, George G. Vadas, Michele A. Cochran, Aaron J. Beck

Presentations

Groundwater advection at the sediment-surface water interface is an important biogeochemical mechanism controlling the transport and bioavailability of contaminants in estuaries. At sites along the Elizabeth River (VA, USA) where the subterranean environment is heavily contaminated with polycyclic aromatic hydrocarbon (PAH)-rich dense non-aqueous phase liquid (DNAPL), consideration of groundwater-surface water dynamics and associated chemical exchange is critical for effective remediation. Preliminary data suggest that porewater advection in permeable sediments at this location is controlled by a host of physical forcing mechanisms that correspond with total flow estimates of up to 15,000 centimeters/year. Here, the efficacy of sediment remediation strategies, including …

Effects Of Commercial Clam Aquaculture On Biogeochemical Cycling In Shallow Coastal Ecosystems, Annie E. Murphy, Iris C. Anderson, Mark W. Luckenbach

Presentations

The bivalve aquaculture industry is expanding worldwide; sustainability requires improved understanding of its interactions with the environment. As suspension feeders, bivalves, such as clams, reduce primary production through feeding, and thus dampen eutrophication. Additionally, enhanced rates of denitrification, the microbial removal of reactive nitrogen, have been reported in bivalve sediments due to increased organic matter supply through biodeposition; another potential, yet indirect, control on eutrophication. Simultaneously, bivalves can influence local ‘bottom-up’ effects on production by enhancing nutrient regeneration through excretion and microbial mineralization of biodeposits. At clam aquaculture sediments, respiration and nutrient regeneration rates were significantly higher compared to uncultivated …

Quantifying Finfish And Blue Crab Use Of Created Oyster Reefs In The Lower Chesapeake Bay, Bruce W. Pfirrmann, Rochelle D. Seitz

Presentations

Structurally complex reefs created by the eastern oyster Crassostrea virginica provide a host of ecosystem services yet have experienced significant declines, prompting extensive restoration efforts. We investigate the use of created oyster reefs in the lower Bay by mobile finfish and blue crabs with field surveys and diet analysis. The results of this study provide insight into how restoration activities influence estuarine community dynamics and the provision of ecosystem services.

Structural Complexity And Location Affect The Habitat Value Of Restored Oyster Reefs, Melissa Karp, Rochelle Seitz

Presentations

Oyster reefs provide a suite of valuable ecosystem services, such as water filtration, nitrogen sequestration, and provision of habitat and foraging grounds. The global decline of these habitats has had negative economic and ecological impacts to coastal waters worldwide. In the Chesapeake Bay, < 1% of the historic oyster population remains and efforts to restore oyster populations and the services they provide have been increasing. Building reefs that successfully provide specific ecosystem services may require different techniques then previously used, and success may depend on reef morphology, location, and environmental conditions. Settling trays were embedded into previously restored oyster reefs that varied in their structural complexity (rugosity) in multiple rivers in the lower Chesapeake Bay. Trays were collected after 7-weeks, sorted, and species identified and weighed (ash-free dry weight) to obtain species diversity, abundance, and biomass. Species composition data was analyzed using nMDS plots, which showed that salinity was an important driver of differences in species composition. Results of an ANOVA analysis found that species diversity was significantly greater on reefs in the high-salinity rivers compared to reefs in low-salinity rivers. Total organism abundance and biomass were positively correlated with reef structural complexity measures, such as rugosity, oyster clump volume, and oyster biomass. These results suggest that more complex oyster reefs in higher salinity locations may support more diverse and productive benthic communities. This study provides insight into the driving factors that structure oyster reef communities and has important implications for oyster reef restoration design and management.

The Relationship Between Reproduction And Mortality In Triploid Crassostrea Virginica: A Matter Of Economic Importance, Joseph L. Matt, Standish K. Allen

Presentations

The goal of this project is to maximize survival for commercially produced triploid Crassostrea virginica oysters in Virginia. Over the last few years, commercial oyster growers in Virginia have reported significant mortality events of triploid oysters during the spring and summer months. The summer of 2014 was the worst yet, as growers across the state reported summer mortality, most severe on the Eastern shore and in some cases as high as 85% of the crop (Karen Hudson, personal communication). Surviving oysters from some of these mortality events were sent to the Virginia Institute of Marine Science and several of the …

Evaluating Recruitment Of American Eel, Anguilla Rostrata, In The Potomac River (Spring 2015), Troy D. Tuckey, Mary C. Fabrizio

Reports

The Atlantic States Marine Fisheries Commission (ASMFC) adopted the Interstate Fishery Management Plan (FMP) for the American Eel in November 1999. The FMP focuses on increasing coastal states’ efforts to collect American Eel data through both fishery‐dependent and fishery‐independent studies. Consequently, member jurisdictions agreed to implement an annual survey for young‐of‐year (YOY) American Eels. The survey is intended to “…characterize trends in annual recruitment of the YOY eels over time [to produce a] qualitative appraisal of the annual recruitment of American Eel to the U.S. Atlantic Coast” (ASMFC 2000). The development of these surveys began in 2000 with full implementation …

Historical Summer Distribution Of The Endangered North Atlantic Right Whale (Eubalaena Glacialis): A Hypothesis Based On Environmental Preferences Of A Congeneric Species, Sophie Monserrat, Maria G. Pennino, Tim D. Smith, Randall R. Reeves, Christine N. Meynard, David M. Kaplan, Ana S.L. Rodrigues

VIMS Articles

Aim: To obtain a plausible hypothesis for the historical distribution of North Atlantic right whales (NARWs) (Eubalaena glacialis) in their summer feeding grounds. Previously widespread in the North Atlantic, after centuries of hunt- ing, these whales survive as a small population off eastern North America. Because their exploitation began before formal records started, information about their historical distribution is fragmentary.

Marine Debris & Microplastics: Sources & Solutions For Coastal Virginia, Center For Coastal Resources Management, Virginia Institute Of Marine Science

Reports

Rivers & Coast is a periodic publication of the Center for Coastal Resources Management, Virginia Institute of Marine Science. The goal of Rivers & Coast is to keep readers well informed of current scientific understanding behind key environmental issues related to watershed rivers and coastal ecosystems of the Chesapeake Bay.

Virginia Game Fish Tagging Program Annual Report 2014, Susanna Musick, Lewis Gillingham

Reports

Through 2014, the Virginia Game Fish Tagging Program has maintained a 19-year database of records for tagged and recaptured fish. The program is a cooperative project of the Virginia Saltwater Fishing Tournament (under the Virginia Marine Resources Commission-VMRC) and the Virginia Institute of Marine Science (VIMS) of the College of William and Mary (under the VIMS Marine Advisory Program).

Monitoring Relative Abundance Of American Shad And River Herring In Virginia Rivers 2014 Annual Report, Eric J. Hilton, Rob Latour, Brian Watkins, Ashleigh Magee

Reports

Concern about the decline in landings of American shad (Alosa sapidissima) along the Atlantic coast prompted the development of an interstate fisheries management plan (FMP) under the auspices of the Atlantic States Marine Fisheries Management Program (ASMFC 1999). Legislation enables imposition of federal sanctions on fishing in those states that fail to comply with the FMP. To be in compliance, coastal states are required to implement and maintain fishery-dependent and fishery-independent monitoring programs as specified by the FMP. For Virginia, these requirements include spawning stock assessments, the collection of biological data on the spawning run (e.g., age-structure, sex ratio, and …

Virginia Shellfish Aquaculture Situation And Outlook Report : Results Of The 2014 Virginia Shellfish Aquaculture Crop Reporting Survey, Karen Hudson, Thomas J. Murrary

Reports

The Virginia Shellfish Aquaculture Situation and Outlook Report has been produced annually by Virginia Institute of Marine Science extension partners affiliated with Virginia Sea Grant since 2005. The survey and report provides annual assessments with which to gauge growth and inputs in Virginia’s shellfish aquaculture industry. This report is based upon an industry survey completed during the first quarter of 2015.

Estimating Relative Abundance Of Young-Of-Year American Eel, Anguilla Rostrata, In The Virginia Tributaries Of Chesapeake Bay (Spring 2014), Troy D. Tuckey, Mary C. Fabrizio

Reports

The Atlantic States Marine Fisheries Commission (ASMFC) adopted the Interstate Fishery Management Plan (FMP) for the American Eel in November 1999. The FMP calls for efforts to collect American Eel data through both fishery-dependent and fishery-independent studies in coastal states. Consequently, member jurisdictions agreed to implement an annual survey for young-of-year (YOY) American Eels. The survey is intended to “…characterize trends in annual recruitment of the YOY eels over time [to produce a] qualitative appraisal of the annual recruitment of American Eel to the 4 U.S. Atlantic Coast” (ASMFC 2000). The development of these surveys began in 2000 with full …

Representing Taxonomic, Phylogenetic And Functional Diversity: New Challenges For Mediterranean Marine-Protected Areas, Francois Guilhaumon, Camille Albouy, Et Al, Christine N. Meynard

VIMS Articles

To assess gaps in the representation of taxonomic, phylogenetic and func- tional diversity among coastal fishes in Mediterranean marine-protected areas (MPAs).

Scientific Evidence Supports A Ban On Microbeads, Cm Rochman, Sm Kross, Jb Armstrong, Mt Bogan, Es Darling, Sj Green, Ar Smyth, D Verissimo

VIMS Articles

No abstract provided.

Oyster Reef Connectivity Inferred Via Population Genetic Analysis, Brendan Douglas Turley

Dissertations, Theses, and Masters Projects

A panel of 48 single nucleotide polymorphism markers (SNPs) was developed for use in a population genetic analysis of the Eastern Oyster Crassostrea virginica sampled from the lower Chesapeake Bay. The SNPs were developed from published and unpublished sequencing data and developed to be used on a Fluidigm Biomark. A selection of 95 SNPs were chosen initially for development and the best 48 were selected for downstream applications. This project was a collaboration with the non-profit Chesapeake Bay Foundation (CBF) to examine their oyster reef restoration project in the Lafayette River, Virginia. The CBF wanted to test a hydrodynamic connectivity …

The Reproductive Biology Of Striped Bass (Morone Saxatilis) In Chesapeake Bay, Carissa L. Gervasi

Dissertations, Theses, and Masters Projects

The Striped Bass (Morone saxatilis) is an anadromous finfish that supports a lucrative fishery along the Atlantic coast of the United States and serves as a vital component of estuarine food webs. Once Striped Bass stocks were restored after crashing in the late 1980s, abundance skyrocketed to record levels. Over the past decade however, abundance has steadily declined, concurrent with an outbreak of mycobacteriosis. Disease prevalence is currently >50%, and previous research has demonstrated diseasepositive fish exhibit slower growth and increased natural mortality compared to diseasenegative fish. The purpose of this research was to provide a contemporary description of Chesapeake …

Diel, Seasonal, And Interannual Patterns In Mesozooplankton Abundance In The Sargasso Sea, Jami Alora Ivory

Dissertations, Theses, and Masters Projects

Temporal changes in mesozooplankton community structure are influenced by a combination of environmental factors. Epipelagic mesozooplankton biomass in the Sargasso Sea has increased over the last two decades, with a related increase in zooplankton-mediated carbon export. Unknown, however, are the patterns and variability at different temporal scales (diel, seasonal, and interannual) in abundance of each major zooplankton taxon, and how these patterns relate to physical and other environmental changes. I enumerated major taxa of mesozooplankton collected from monthly day and night net tows in the epipelagic zone at the Bermuda Atlantic Time-series Study (BATS) site in the Sargasso Sea from …

The Influence Of Short-Term Events On The Hydrographic And Biological Structure Of The Southwestern Ross Sea, Randolph M. Jones

Dissertations, Theses, and Masters Projects

Relative to the rest of the Southern Ocean, the Ross Sea continental shelf experiences very high productivity and phytoplankton biomass, which supports an extensive food web including high concentrations of upper trophic level biomass. Conventional observational methods, including ship-based sampling, instrumented moorings, satellite imagery, and computer-based modelling, have illustrated the seasonal progression of the phytoplankton bloom over the past four decades. While we have been sampling phytoplankton variability in the Ross Sea on a variety of relatively large scales, with observations at specific locations or times, over spans of time, or at specific depths, our understanding of smaller scales of …

Spread And Interaction Of Epidemics And Information On Adaptive Social Networks, Yunhan Long

Dissertations, Theses, and Masters Projects

The spread of diseases and opinions has profoundly affected the development of human societies. The structure of the underlying social network may change as a result of individuals changing their social connections in response to an ongoing epidemic or opinion spreading, either for self protection or as an expression of personal values. The interaction of spreading processes and the underlying network structure has been a focus of many recent studies. In this dissertation, we construct models to better incorporate heterogeneous responses to disease spread and attempted opinion spread.;We first model the simultaneous spread of an epidemic and awareness about the …

Mercury Reduces Avian Reproductive Success Through Direct Embryotoxicity Rather Than Altered Parental Behavior, Stephanie Yen Chin

Dissertations, Theses, and Masters Projects

No abstract provided.

Developing Methodologies For Studying Elasmobranchs And Other Data-Poor Species, Kristen L. Omori

Dissertations, Theses, and Masters Projects

Fisheries have become increasingly important to manage and conserve, and this is particularly challenging for data-poor species. Elasmobranchs are commonly considered data-poor or data-limited species. Their life history characteristics make their populations susceptible to depletion from fishing pressures and habitat degradation. Thus, it is important to understand the movement patterns and habitat use of the targeted species as well as the models used in the stock assessment for the species. This thesis involves developing techniques and information for data-poor species, such as elasmobranchs. The objectives of this research were to 1) identify the wintering grounds for the cownose rays (Rhinoptera …

The Influence Of Zostera Marina And Ruppia Maritima On Habitat Structure And Function In A Changing Environment In The Chesapeake Bay, Emily D. French

Dissertations, Theses, and Masters Projects

Seagrasses modify the coastal areas they occupy by trapping sediments and improving water clarity, providing habitat for marine animals, and cycling nutrients. Populations are in decline worldwide, and in the lower Chesapeake Bay, U.S., Zostera marina populations are decreasing due to poor water quality and high summertime temperatures. Ruppia maritima, a seagrass that is smaller, but has a greater tolerance of high temperatures than Z. marina, is replacing Z. marina in some areas. This study examined bed characteristics and microbial community structures of each seagrass species, as well as mixed assemblages, at three sites in the lower Chesapeake Bay where …

The Influence Of Environmental Factors And Resource Availability On Zostera Marina Flowering Intensity, Andrew J. Johnson

Dissertations, Theses, and Masters Projects

Sexual reproduction and the production of seeds are important for the resilience of all angiosperm species. For clonal species, such as the seagrass Zostera marina, resource allocation is complicated because these species reproduce both asexually and sexually, and the factors contributing to allocation to these two processes remains unknown. The goal of this study was, therefore, to investigate the importance of critical light, nutrient, and rhizome resources on Z.

marina sexual reproduction and flowering intensity. To evaluate the importance of sediment nutrients on Z. marina flowering intensity two distinct field manipulative experiments and one field survey were initiated: 1. Sediments …

A Mathematical Model Of Tau Protein Hyperphosphorylation: The Effects Of Kinase Inhibitors As A Theoretical Alzheimer's Disease Therapy, Patrick Neil Blank

Dissertations, Theses, and Masters Projects

No abstract provided.

A Model Of Carrying Capacity And Ecosystem Impacts In A Large-Scale, Bivalve-Dominated Agro-Ecosystem: Hard Clam Aquaculture In Cherrystone Inlet, Va, Michael A. Kuschner

Dissertations, Theses, and Masters Projects

With the recent growth of the hard clam aquaculture industry, sites of intensive aquaculture have emerged as large-scale agro-ecosystems where the success of aquaculture production is dynamically linked to ecosystem function. Large scale clam aquaculture operations are associated with a range of potential positive and negative feedbacks related to nutrient dynamics, water and sediment quality, proliferation of macroalgae, and carrying capacity. Quantitative modeling tools are needed to support system-level planning related to site selection, scale of operations, production capacity and ecosystem function. The purpose of this study was to develop a model for Cherrystone Inlet, VA, where one-third (1.9 km2) …