Physical Sciences and Mathematics Commons^™

Bidentate Ferrocenyl-Dithiol Reagents For Nanocluster Surface Functionalization, Yiyi Liu

Electronic Thesis and Dissertation Repository

Previous work using monodentate ferrocenyl-chalcogen reagents for nanocluster surface functionalization has indicated an effective way to involve ferrocene moieties onto the surface of these frameworks. However, the abilities of the large polynuclear nanocluster with ferrocene rich surface to form crystalline materials suitable for single crystal X-ray analysis proved to be limited. New bidentate ferrocenyl-chalcogen reagents have been synthesized and characterized in order to probe their ability in this case.

The preparation of new bidentate ferrocenyl chalcogen reagents 1,1’-fc(C{O}OCH₂CH₂SH)₂ (fc = ferrocenyl) and 1,1’-fc(C{O}NHCH₂CH₂SH)₂ are presented. Furthermore, the preparation of silylated …

Coordination Nature Of 4-Mercaptoaniline To Sn(Ii) Ion: Formation Of A One Dimensional Coordination Polymer And Its Decomposition To A Mono Nuclear Sn(Iv) Complex, Eon S. Burkett, Tasneem A. Siddiquee

Chemistry Faculty Research

The coordination of the bifunctional ligand 4-mercaptoaniline with aqueo us tin(II) metal ion was studied. A coordination polymer was synthesized when an aqueous solution of SnCl2 was treated with 4-MA. The crystalline material is stable under atmospheric conditions retaining its oxidation state. However, when submerged in a solution saturated with oxygen, the compound oxidizes to a mononuclear tin(IV) complex. Both the compounds were characterized by single crystal X-ray diffraction studies. Although the structure of the tin(IV) complex was previously reported, crystal structure of this compound was redetermined.

Synthesis And Thermodynamic Analysis Of Volatile Beta-Diketone Complexes Of Select Lanthanides Via Gas-Phase Separations, Daniel Hanson

Doctoral Dissertations

Rapid separation techniques for fission and activation products have long been desired to supplant the slow solution-based methodologies currently used. In this work, rare earth elements were derivatized with β [beta]-diketones to synthesize rare earth complexes with high volatility suitable for gas-phase separations. Rare earth elements samarium and dysprosium were combined with hfac (1,1,1,5,5,5-hexafluoro-2,4-pentadione) and fod (6,6,7,7,8,8,8-heptafluoro-2,2-dimethyl-3,5-octanedione) and analyzed using a gas-phase separation technique. Rare earth elements praseodymium and europium were combined with dpm (2,2,6,6-tetra-methyl-3,5-heptanedione) and similarly analyzed. Employing the data from the separations, the entropy (Δ [delta] S) and enthalpy (Δ [delta] H) of adsorption were evaluated mathematically based …

Association Of G-Quadruplex Forming Sequences With Human Mtdna Deletion Breakpoints, D. W. Dong, F. Pereira, Steven Paul Barrett , '13, J. E. Kolesar, K. Cao, J. Damas, Liliya A. Yatsunyk, F. B. Johnson, B. A. Kaufman

Chemistry & Biochemistry Faculty Works

Background: Mitochondrial DNA (mtDNA) deletions cause disease and accumulate during aging, yet our understanding of the molecular mechanisms underlying their formation remains rudimentary. Guanine-quadruplex (GQ) DNA structures are associated with nuclear DNA instability in cancer; recent evidence indicates they can also form in mitochondrial nucleic acids, suggesting that these non-B DNA structures could be associated with mtDNA deletions. Currently, the multiple types of GQ sequences and their association with human mtDNA stability are unknown. Results: Here, we show an association between human mtDNA deletion breakpoint locations (sites where DNA ends rejoin after deletion of a section) and sequences with G-quadruplex …

Cellular Zinc Trafficking: The Zinc Proteome And Its Reactions With Cadmium, Mohammad Ali Namdarghanbari

Theses and Dissertations

Metals play a crucial role in living systems. Iron, zinc, copper, molybdenum, and manganese are involved in many essential biological activities. Among transition metals, zinc after iron is the most abundant transition metal in the human body and the most abundant in the brain. It exists in more than 3000 proteins, which comprise about 10% of the human proteome. Zn2+ dyshomeostasis is associated with chronic diseases such as metabolic syndrome, diabetes and related complications, bone loss, growth retardation in young children, and neurological and behavioral problems. Despite a good knowledge obtained for metabolism of some metal ions such as copper, …

Molecular Probes For The Detection Of Zn2+ And Fe3+ Ions, Erendra Manandhar

Dissertations

A number of molecular probes have been designed and synthesized for the detection of Zn²⁺ and Fe³⁺ ions. Two types of functional groups have been incorporated into the molecular scaffolds to utilize different fluorescent mechanisms. The first class of receptors contains a pyrene moiety. These molecular probes use the excimer mechanism for the detection of Zn²⁺ ion. The probes work well in an organic solvent with a detection limit of 20 nM (one ppb). Alternatives are made to make them water soluble, but this proved to be difficult. An interesting ion-induced self-assembly system will also be discussed. …

Metallopeptides From Design To Catalysis: Structure, Oxidative Activities, And Inhibition Studies Of Designed And Naturally Occurring Metallopeptides, Alaa Hassan Hashim

USF Tampa Graduate Theses and Dissertations

Structural and mechanistic complexities of copper-dioxygen systems have attracted much attention in the field of bioinorganic chemistry, both in model systems and trapped protein intermediates. The research presented herein is focused on model and naturally occurring metallopeptide systems, from its design to catalysis. Copper is used as the coordinating metal ion, with cobalt and zinc as probes for metal binding. The bioinorganic chemistry of copper proteins and its coordination and spectroscopic properties are briefly discussed in chapter 1. The next two chapters are centered on the de novo design of a minimalistic metallopeptide system with an amino acid sequence of …

Synthesis And Formation Mechanism Of Cuins2 Nanocrystals With A Tunable Phase, Chao Yu, Linlin Zhang, Long Tian, Dan Liu, Fanglin Chen, Cheng Wang

Faculty Publications

Chalcopyrite CuInS₂ (CIS) hierarchical structures composed of nanoflakes with a thickness of about 5 nm were synthesized by a facial solvothermal method. The thermodynamically metastable wurtzite phase CIS would be obtained by using InCl₃ instead of In(NO₃)₃ as In precursor. The effects of the In precursor and the volume of concentrated HCl aqueous solution on the phases and morphologies of CIS nanocrystals have been systematically investigated. Experimental results indicated that the obtained phases of CIS nanocrystals were predominantly determined by precursor-induced intermediate products. The photocatalytic properties of chalcopyrite and wurtzite CIS in visible-light-driven degradation of …

Transformation Of Biomass Carbohydrates By Transition Metal Catalysts, Christine M Bohn

Open Access Dissertations

By selectively removing functional groups from biomass derived carbohydrates, valuable platform chemicals can be generated from renewable sources. Through dehydration chemistry glucose can be upgraded into 5-(Hydroxymethyl)-2-furfuraldehyde (HMF) and levulinic acid. Iron (III) chloride hexahydrate has shown moderate activity to transform glucose into HMF and has also shown high yields and selectivity for the production of levulinic acid. Typically synthesized from acidic solutions made with mineral acids, levulinic acid has now been produced in high yields with a metal salt. The difference between maximizing production for HMF or levulinic acid from the same catalyst relies on the control of the …

Electrochemically Active Biofilm Assisted Synthesis Of Ag@Ceo2 Nanocomposites For Antimicrobial Activity, Photocatalysis And Photoelectrodes, Mohammad Mansoob Khan Dr, S. A. Ansari, J. H. Lee, M. O. Ansari, J Lee, M. H. Cho

Dr. Mohammad Mansoob Khan

Ag@CeO2 nanocomposites were synthesized by a biogenic and green approach using electrochemically active biofilms (EABs) as a reducing tool. The as-synthesized Ag@CeO2 nanocomposites were characterized and used in antimicrobial, visible light photocatalytic and photoelectrode studies. The Ag@CeO2 nanocomposites showed effective and efficient bactericidal activities and survival test against Escherichia coli O157:H7, and Pseudomonas aeruginosa. The as-synthesized Ag@CeO2 nanocomposites also exhibited enhanced visible light photocatalytic degradation of 4-nitrophenol and methylene blue than pure CeO2. A photocatalytic investigation showed that the Ag@CeO2 nanocomposites possessed excellent visible light photocatalytic activities compared to pure CeO2. Electrochemical impedance spectroscopy and photocurrent measurements showed that the …

Investigation Of The Crystallization Of Dnl-6 And Ft-Raman Spectroscopic Investigation Of Guest Molecules In Mofs, Maxwell Goldman

Electronic Thesis and Dissertation Repository

Microporous solids are a widely used material in adsorption, storage and catalysis. In this thesis, the crystallization of the silcoaluminaphosphate DNL-6 was characterized using powder X-ray diffraction and solid state nuclear magnetic resonance. Two crystallization routes of the SAPO DNL-6 were studied, which are the hydrothermal method and the dry-gel conversion method. Both methods followed the same crystallization pathway and showed a layered intermediate that is then transformed into DNL-6. The reaction requires two templating agents to create the RHO topology and silicon substitutes into the framework by replacing single phosphorous atoms.

This thesis contains the conformational analysis of halocarbons …

Physicochemical Modifications And Applications Of Carbon Nano-Onions For Electrochemical Energy Storage, Rituraj Borgohain

Rituraj Borgohain

Carbon nano-onions (CNOs), concentrically multilayered fullerenes, are prepared by several different methods. We are studying the properties of two specific CNOs: A-CNOs and N-CNOs. A-CNOs are synthesized by underwater arc discharge, and N-CNOs are synthesized by high-temperature graphitization of commercial nanodiamond. In this study the synthesis of A-CNOs are optimized by designing an arc discharge aparatus to control the arc plasma. Moreover other synthesis parameters such as arc power, duty cycles, temperature, graphitic and metal impurities are controlled for optimum production of A-CNOs. Also, a very efficient purification method is developed to screen out A-CNOs from carboneseous and metal impurities. …

Mechanistic Studies Of Salt Effects On Bimolecular Electron-Transfer Reactions Of Pentaamine Ruthenium Pyridyl Complexes Studied By 19f Nmr Line-Broadening And T2 Spin-Echo Techniques, Nicholas J. Magarian

Master's Theses

Kinetic salt effects on the bimolecular ET self-exchange reaction between pentaamineruthenium(II)(3-trifluoromethylpyridine)²⁺, (NH₃)₅Ru^IItfmp²⁺, and pentaamineruthenium(III)(3-trifluoromethylpyridine)³⁺, (NH₃)₅Ru^IIItfmp³⁺, have been measured using both ¹⁹F NMR line-broadening and CPMG T₂ spin-echo relaxation techniques in H₂O and D₂O. Over the equimolar reactants concentration range of 0.10 mM – 8.00 mM there was a definite “self-salting” rate increase arising from the increased solution ionic strengths due to the reactants and counterions themselves. The magnitude of this effect diverged significantly, however, …

Optimization Of P-Type Czts Nanocrystal Thin Film Layers For Applications In Low Cost Photovoltaic Devices, Kyle S.B. Jeffs

Electronic Thesis and Dissertation Repository

In this thesis Cu2ZnSnS4 nanocrystal synthesis was optimized by way of photoelectrochemical measurements through tuning the stoichiometry. Formation of a Cu2ZnSnS4 light-absorbing layer was studied using multiple depositions methods. These included dropcasting, electrophoretic deposition, and use of 3-mercaptopropyl trimethoxysilane as a chemical linker. Dropcasting samples were compared according to the solvents used to suspend the nanocrystals. Photoelectrochemical measurements were used to compare dropcasting with electrophoretic deposition and use of 3-mercaptopropyl trimethoxysilane as a chemical linker. Dropcasting was shown to be the least effective method of depositing the light-absorbing layer. Samples prepared by electrophoretic deposition were optimized according to a number …

Water In The Computer Lab! (A Computational Project For Undergraduate Inorganic Chemistry), Bradley M. Wile, Trilisa M. Perrine

Chemistry and Biochemistry Faculty Scholarship

No abstract provided.

Self-Assembly Of Gold Nanosphere Dimers By Inertial Force, George Andrew Christopher Sakhel

Graduate Theses and Dissertations

The morphology and composition of a nanoparticle (NP) play a critical role in determining the NP's properties and function. To date, researchers have created a myriad of NPs of different shapes, sizes, and compositions with interesting attributes and applications ushering a revolution in medicine, electronics, microscopy, and microfluidics.

In this study, gold (Au) nanosphere dimers (NSDs) have been synthesized through a novel self-assembly method. These particles were created from Au NPs mono-dispersed in aqueous solution via a process of centrifugation and capping agent replacement. Au NSDs consist of two Au NPs combined together with minimal gaps between them. Optical spectral …

Heat Release Of Polyurethanes Containing Potential Flame Retardants Based On Boron And Phosphorus Chemistries, Vladimir Benin, Bastien Gardelle, Alexander Morgan

Chemistry Faculty Publications

Using a polyurethane of methylene diphenyl isocyanate and 1,3-propane diol, several new non-halogenated aromatic boron and phosphorus flame retardants were evaluated for heat release reduction potential using the pyrolysis combustion flow calorimeter (PCFC). The polyurethanes were prepared in the presence of the potential flame retardants via solvent mixing and copolymerization methods, and were then analyzed via spectroscopic methods to determine if the flame retardant was still present in the final product. PCFC testing on the resulting products showed that the flame retardant molecule can have different effects on heat release depending upon how it is mixed into the polyurethane. Some …

Synthesis, Characterization, Antimicrobial Activity And Applications Of Polyanilineti(Iv)Arsenophosphate Adsorbent For The Analysis Of Organic And Inorganic Pollutants, Mohammad Oves

Mohammad Oves

No abstract provided.

Synthesis And Dna-Binding Studies With Two Stericallyfriendly Porphyrin Frameworks, Srijana Ghimire

Open Access Dissertations

Peripheral substituents on cationic porphyrins play a significant role during binding with DNA hosts. Possible applications of these systems in photodynamic therapy as well as in anti-bacterial and anti-cancer therapies motivate the binding studies. For characterizing DNA binding motifs different methods are useful including absorption, emission, and circular dichroism spectroscopies, as well as viscometry and X-ray crystallography. With the classic H₂ T₄ porphyrin, or 5,10,15,20-tetra(N-methylpyridinium-4-yl)porphyrin, the mode of binding varies with the base composition of the DNA host. The porphyrin binds adenine-thymine rich sequences externally whereas intercalation occurs in guanine-cytosine rich sequences. The McMillin group has made some …

Synthesis, Characterization And Reactivity Studies Of Fe(Ii) Complexes With Relevance To The Radical Sam Enzymes, Xixi Hong

Master's Theses (2009 -)

It is well-established that S-adenosylmethionine (SAM) serves as the methyl group donor in methylations of DNA, hormones, neurotransmitters and signal transduction systems. However, a new class of enzymatic reactions involving SAM has recently attracted considerable attention. In these systems, SAM initiates radical-based reactions at the active sites of enzymes via formation of an adenosyl radical, which further abstracts a H-atom from the substrate to initiate a radical-based mechanism. However, modeling studies of radical SAM enzymes have been hindered, by difficulties in preparing adequate synthetic [Fe4S4] clusters. We prepared a novel series of Fe(II) complexes with tripodal tris(2-hydroxybenzyl)amine ligands, which replicate …

Determination Of Corrosion Inhibitor Lubricity Improver In Jet Fuel By Liquid Chromatography-Electrospray Ionization Mass Spectrometry, David W. Johnson, Milissa Flake, Ryan Adams

Chemistry Faculty Publications

Military jet fuel (JP-8) is very similar to commercial jet fuel (Jet A) except for the presence of three additives, fuel system icing inhibitor, corrosion inhibitor–lubricity improver (CI-LI), and antistatic additive, which are added to improve characteristics of JP-8. Of particular interest is the CI-LI additive; the most common active ingredient is a dimer of linoleic acid. This article focuses on quantification of the active ingredient in the CI-LI additive by liquid chromatography–mass spectrometry (LC–MS). This method will allow the determination of CI-LI content in military jet fuel samples.

Density Functional Theory Modeling Of It-Stacking And Electrophilic Donor-Acceptor Interactions With Application To Therapeutic Targeting Of Zinc-Finger Proteins, Patricia Beall Lutz

Chemistry & Biochemistry Theses & Dissertations

Several viruses, including viruses that cause cancer, contain conserved zinc finger (ZF) proteins that are essential for viral reproduction, making them attractive drug targets for cancer and viral treatment. ZFs are small protein domains that have Zn²⁺ tetrahedrally coordinated to at least 2 Cys and His. They form three classes of ZFs depending on the amino acid ligands, CCHH, CCCH, and CCCC. Zn²⁺ is stable towards redox reactions; however, the Cys thiolates are redox active. Oxidation of the Cys thiolates release Zn²⁺, and the ZF loses its tertiary structure and can no longer bind DNA or …

Synthesis, Characterization And Mechanistic Studies Of Biomolecules@Mesomofs, Yao Chen

USF Tampa Graduate Theses and Dissertations

Encapsulation of biomolecules is of great interest to research advances related to biology, physiology, immunology, and biochemistry, as well as industrial and biomedical applications such as drug delivery, biocatalysis, biofuel, food and cosmetics. Encapsulation provides functional characteristics that are not fulfilled by free biomolecules and stabilizes the fragile biomolecules. In terms of biocatalysis, solid support can often enhance the stability of enzymes, as well as facilitate separation and recovery for reuse while maintaining activity and selectivity. Various kinds of materials have been used for encapsulation of biomolecules, among which, porous materials are an important group. Metal-organic frameworks (MOFs) have attracted …

Visible Light-Driven Photocatalytic And Photoelectrochemical Studies Of Ag-Sno2 Nanocomposites Synthesized Using An Electrochemically Active Biofilm, Mohammad Mansoob Khan Dr, S. A. Ansari, M. O. Ansari, J. Lee, M. H. Cho

Dr. Mohammad Mansoob Khan

Ag-SnO2 nanocomposites (1 mM and 3 mM) were synthesized in water at room temperature using an electrochemically active biofilm. The resulting nanocomposites were characterized by X-ray diffraction, transmission electron microscopy, diffuse reflectance spectroscopy, photoluminescence spectroscopy and X-ray photoelectron spectroscopy. The Ag-SnO2 nanocomposites exhibited enhanced photocatalytic activity under visible light irradiation for the degradation of methyl orange, methylene blue, 4-nitrophenol and 2-chlorophenol compared with pure SnO2 nanostructures. Photoelectrochemical measurements, such as electrochemical impedance spectroscopy, linear scan voltammetry and differential pulse voltammetry in the dark and under visible light irradiation, further supported the visible light activity of the Ag-SnO2 nanocomposites. These results …

Enhanced Thermoelectric Behaviour And Visible Light Activity Of Ag@Tio2/Polyaniline Nanocomposite Synthesized By Biogenic-Chemical Route, M. O. Ansari, Mohammad Mansoob Khan Dr, S. A. Ansari, J. Lee, M. H. Cho

Dr. Mohammad Mansoob Khan

This paper reports the synthesis of visible light-active Ag@TiO2/Pani nanocomposite through a facile biogenic-chemical route. Ag@TiO2/Pani nanocomposite was prepared by the in-situ oxidative polymerization of aniline in the presence of Ag@TiO2 nanocomposite, which was obtained via a biogenic route. The synthesized Ag@TiO2/Pani nanocomposite was confirmed by UV-visible spectroscopy, photoluminescence spectroscopy, transmission electron microscopy, X-ray diffraction, X-ray photoelectron spectroscopy and thermogravimetric analysis. The Ag@TiO2/Pani nanocomposite was doped with HCl or para-toluene sulfonic acid to render it conducting. An analysis of the thermoelectrical behavior using a cyclic aging technique showed that the electrical conductivity and thermal stability of Pani got improved after …

Metal-Organic Frameworks Based On Pyridyl-Tetrazole Ligands Containing Ester Or Carboxylate Pendant Arms, Ursula Sheridan, John Gallagher, Morten Bjerrum, Adrienne Fleming, Fintan Kelleher, John Mcginley

Articles

The coordination of pyridyl-tetrazole derivatives containing ester substituents, at either the N-1 or N-2 position of the tetrazole ring, with copper(II) chloride results in the formation of either 1:1 or 1:2 copper to ligand complexes, depending on the ligand. However, when the ester functionality is changed to a carboxylate group, the resulting complexation reactions yield metal-organic frameworks. The resulting structures vary dramatically in pore size, depending on both reaction solvents and position of carboxylate group on the tetrazole ring. Despite the presence of sodium cations in the reaction mixtures, no sodium incorporation was ever observed in any of the complexes. …

Defect-Induced Band Gap Narrowed Ceo2 Nanostructures For Visible Light Activities, Mohammad Mansoob Khan Dr, S. A. Ansari, D. Pradhan, D. H. Han, J Lee, M. H. Cho

Dr. Mohammad Mansoob Khan

This work reports an electron beam irradiation (30 kGy and 90 kGy) approach to narrow the band gap of the pristine CeO2 nanostructure (p-CeO2) to enhance their visible light activity through defect engineering. This was confirmed by diffuse reflectance spectroscopy, photoluminescence, Raman spectroscopy, X-ray diffraction, X-ray photoelectron spectroscopy (XPS), Brunauer–Emmett–Teller, electrochemical impedance spectroscopy and linear scan voltammetry. XPS revealed changes in the surface states, composition, Ce4+ to Ce3+ ratio and other defects in the modified CeO2 nanostructures (m-CeO2). The m-CeO2 exhibits excellent photocatalytic activities by degrading 4-nitrophenol and methylene blue in the presence of visible light (λ > 400 nm) compared …

Enhanced Thermal Stability Under Dc Electrical Conductivity Retention And Visible Light Activity Of Ag/Tio2@Polyaniline Nanocomposite Film, M. O. Ansari, Mohammad Mansoob Khan Dr, S. A. Ansari, K Raju, J Lee, M. H. Cho

Dr. Mohammad Mansoob Khan

The development of organic-inorganic photoactive materials has resulted in significant advancements in heterogeneous visible light photocatalysis. This paper reports the synthesis of visible light-active Ag/TiO2@Pani nanocomposite film via a simple biogenic-chemical route. Electrically conducting Ag/TiO2@Pani nanocomposites were prepared by incorporating Ag/TiO2 in N-methyl-2-pyrrolidone solution of polyaniline (Pani), followed by the preparation of Ag/TiO2@Pani nanocomposite film using solution casting technique. The synthesized Ag/TiO2@Pani nanocomposite was confirmed by UV-visible spectroscopy, photoluminescence spectroscopy, scanning electron microscopy, X-ray diffraction, X-ray photoelectron spectroscopy and thermogravimetric analysis. The Ag/TiO2@Pani nanocomposite film showed superior activity towards the photodegradation of methylene blue under visible light compared to Pani, …

New Metal-Nhc Complexes: Synthesis, Characterization, And Uses, Roy A. Kelly Iii

University of New Orleans Theses and Dissertations

N-Heterocyclic Carbenes (NHC) present a viable alternative to traditional phosphine ligands in a variety of organometallic mediated catalytic reactions. Singlet ground-state carbenes are stabilized by the push-pull presence of two adjacent nitrogen atoms in an imidizolium 5-membered ring, allowing neutral electron donor properties. The ability to synthesize a variety of NHC ligands with differing steric and electronic properties is possible by changing the sustiuents on the nitrogen atoms of the imidizolium. Tunable characteristics and enhanced chemical and thermal stability give NHC’s an advantage over phosphines in many catalytic systems.

This dissertation focuses on the use N-Hetercyclic Carbenes in a variety …

Synthesizing Strong Donor Macrocyclic Tetracarbene Metal Complexes For Catalytic Aziridination, Steven Alan Cramer

Doctoral Dissertations

A small ringed macrocyclic tetracarbene ligand was developed due to the inherent ability of N-heterocyclic carbenes (NHCs) to stabilize high oxidation states of transition metals. This new strong donor ligand was prepared by first synthesizing an 18-atom ringed macrocyclic tetraimidazolium ligand precursor. The tetraimidazolium can be prepared by a two-step procedure. This ligand precursor was deprotonated to prepare a monomeric platinum tetracarbene complex.

A new iron macrocyclic tetra-carbene complex was synthesized by an in situ strong base deprotonation strategy of the ligand precursor. The iron tetracarbene complex was found to catalyze the aziridination of a wide array of functionalized aryl …