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Physical Sciences and Mathematics Commons

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Environmental Sciences

Portland State University

Theses/Dissertations

2009

Enzymology

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Full-Text Articles in Physical Sciences and Mathematics

Active Site Chemistry Of The Nadph-Dependent:7-Cyano-7-Deazaguanine (Preq0) Nitrile Oxidoreductase, An Enzyme Involved In Queuosine Biosynthesis, Bobby Wai Keung Lee May 2009

Active Site Chemistry Of The Nadph-Dependent:7-Cyano-7-Deazaguanine (Preq0) Nitrile Oxidoreductase, An Enzyme Involved In Queuosine Biosynthesis, Bobby Wai Keung Lee

Dissertations and Theses

Queuosine (Q) is a modified nucleoside found at the wobble position of bacterial and eukaryotic transfer RNAs (tRNAs) that are specific for the amino acids tyrosine, histidine, aspartate and asparagine. A recently discovered enzyme in the biosynthetic pathway of Q, the NADPH-dependent 7-cyano-7-deazaguanine oxidoreductase (QueF), carries out the two-fold, four-electron reduction of Q precursor preQ0 to preQ1 and represents the first example of the enzymatic conversion of the nitrile functional group to an amine. Presented herein are kinetic, spectroscopic, mutational, biophysical, and isotope labeling studies directed at the elucidation of the chemical and kinetic mechanisms of this new class of …