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Articles 1 - 25 of 25
Full-Text Articles in Physical Sciences and Mathematics
Plasmid-Borne Biosynthetic Gene Clusters Within A Permanently Stratified Marine Water Column, Paraskevi Mara, David Geller-Mcgrath, Elizabeth A. Suter, Gordon T. Taylor, Maria G. Pachiadaki, Virginia P. Edgcomb
Plasmid-Borne Biosynthetic Gene Clusters Within A Permanently Stratified Marine Water Column, Paraskevi Mara, David Geller-Mcgrath, Elizabeth A. Suter, Gordon T. Taylor, Maria G. Pachiadaki, Virginia P. Edgcomb
Faculty Publications: BCES
Plasmids are mobile genetic elements known to carry secondary metabolic genes that affect the fitness and survival of microbes in the environment. Well-studied cases of plasmidencoded secondary metabolic genes in marine habitats include toxin/antitoxin and antibiotic biosynthesis/resistance genes. Here, we examine metagenome-assembled genomes (MAGs) from the permanently-stratified water column of the Cariaco Basin for integrated plasmids that encode biosynthetic gene clusters of secondary metabolites (smBGCs). We identify 16 plasmid-borne smBGCs in MAGs associated primarily with Planctomycetota and Pseudomonadota that encode terpenesynthesizing genes, and genes for production of ribosomal and non-ribosomal peptides. These identified genes encode for secondary metabolites that are …
Great South Bay, Long Island, New York Summer Water Quality Monitoring Program, Cercom, Molloy University, John Tanacredi Ph.D., Kyle F. Maurelli
Great South Bay, Long Island, New York Summer Water Quality Monitoring Program, Cercom, Molloy University, John Tanacredi Ph.D., Kyle F. Maurelli
CERCOM Reports
The Center for Environmental Research and Coastal Oceans Monitoring (CERCOM) visits 11 locations in the Great South Bay from Memorial Day – Labor Day to monitor dissolved oxygen (DO), pH, salinity, clarity and temperature. Students are trained to assist in CERCOM’s water quality data collection by research assistant Mr. Kyle Maurelli. This monitoring program has been conducted for the past 17 years. These parameters are critical in determining long term water quality conditions in Long Island estuaries
Great South Bay, Long Island, New York Summer Phytoplankton Identification & Monitoring Program, Cercom, Molloy University, John Tanacredi Ph.D., Kyle F. Maurelli
Great South Bay, Long Island, New York Summer Phytoplankton Identification & Monitoring Program, Cercom, Molloy University, John Tanacredi Ph.D., Kyle F. Maurelli
CERCOM Reports
Phytoplankton Collection Methodologies: 80 micron Plankton Tow Net with sample bottle attachment
Phytoplankton Protocol: 1.Gather Samples 2.Make one slide per sample 3.View slides using microscope connected with computer 4. Record findings using “ Row # “ and “ Column letter “ 5. Record using “ Tallies “ per species found within sample 6. Capture anything interesting “ Take Picture “ 7.Duplicate pictures taken 8.Make sure measurement of species found is taken 9. Email Jennifer Maucher at Jennifer.maucher@noaa.gov , include pictures, questions and names of the species you “guess” you found.
Daily Meteorological Report, Cercom, Molloy University, John Tanacredi Ph.D., Kyle F. Maurelli
Daily Meteorological Report, Cercom, Molloy University, John Tanacredi Ph.D., Kyle F. Maurelli
CERCOM Reports
Meteorological data is collected daily at CERCOM and is submitted to the National Weather Service (NWS), in Upton NY at the Brookhaven National Laboratories. Air Temperature, wind speed and direction, pH of precipitation, rain gauge, barometer pressure, cloud cover and estimated altitude by type, are data sets compiled and submitted to the NWS daily. CERCOM’s Co-Op site is the only continuous operating facility on Great South Bay.
Long Island Horseshoe Crab Network Annual Inventory Report, Cercom, Molloy University, John Tanacredi Ph.D., Kyle F. Maurelli
Long Island Horseshoe Crab Network Annual Inventory Report, Cercom, Molloy University, John Tanacredi Ph.D., Kyle F. Maurelli
CERCOM Reports
CERCOM conducts monitoring of 111 beach locations spanning from Brooklyn to Montauk during the optimal breeding season of Limulus polyphemus. These surveys span approximately 15 weeks, commencing in May and concluding in August. Each beach location is meticulously marked with GPS coordinates to ensure consistent annual revisitation. Participation in these surveys necessitates attendance at an HSC Survey training orientation, led by Mr. Key Maurelli, CERCOM's research assistant.
Long Island Horseshoe Crab Network Annual Inventory Report, Cercom, Molloy University, John Tanacredi Ph.D., Kyle F. Maurelli
Long Island Horseshoe Crab Network Annual Inventory Report, Cercom, Molloy University, John Tanacredi Ph.D., Kyle F. Maurelli
CERCOM Reports
CERCOM monitors 115 beach locations from Brooklyn – Montauk during the optimal Limulus Polyphemus breeding season. These beach surveys take place for approximately 15 weeks, ranging from May - August. These beach locations are marked specifically using GPS coordinates, to assure the same location is visited each year. Students and volunteers are required to attend a HSC Survey training orientation led by CERCOM’s research assistant, Mr. Kyle Maurelli. Surveying is done around tide and moon cycles (New/Full Moon). Each site takes about 1-2 hours and data is recorded along an approximate 1 mile distance. Walking along the water’s edge the …
Daily Meteorological Report, Cercom, Molloy University, John Tanacredi Ph.D., Kyle F. Maurelli
Daily Meteorological Report, Cercom, Molloy University, John Tanacredi Ph.D., Kyle F. Maurelli
CERCOM Reports
Meteorological data is collected daily at CERCOM and is submitted to the National Weather Service (NWS), in Upton NY at the Brookhaven National Laboratories. Air Temperature, wind speed and direction, pH of precipitation, rain gauge, barometer pressure, cloud cover and estimated altitude by type, are data sets compiled and submitted to the NWS daily. CERCOM’s Co-Op site is the only continuous operating facility on Great South Bay.
Great South Bay, Long Island, New York Summer Water Quality Monitoring Program, Cercom, Molloy University, John Tanacredi Ph.D., Kyle F. Maurelli
Great South Bay, Long Island, New York Summer Water Quality Monitoring Program, Cercom, Molloy University, John Tanacredi Ph.D., Kyle F. Maurelli
CERCOM Reports
The Center for Environmental Research and Coastal Oceans Monitoring (CERCOM) visits 11 locations in the Great South Bay from Memorial Day – Labor Day to monitor dissolved oxygen (DO), pH, salinity, clarity and temperature. Students are trained to assist in CERCOM’s water quality data collection by research assistant Mr. Kyle Maurelli. This monitoring program has been conducted for the past 17 years. These parameters are critical in determining long term water quality conditions in Long Island estuaries
Great South Bay, Long Island, New York Summer Phytoplankton Identification & Monitoring Program, Cercom, Molloy University, John Tanacredi Ph.D., Kyle F. Maurelli
Great South Bay, Long Island, New York Summer Phytoplankton Identification & Monitoring Program, Cercom, Molloy University, John Tanacredi Ph.D., Kyle F. Maurelli
CERCOM Reports
Phytoplankton Collection Methodologies: 80 micron Plankton Tow Net with sample bottle attachment
Phytoplankton Protocol: 1.Gather Samples 2.Make one slide per sample 3.View slides using microscope connected with computer 4. Record findings using “ Row # “ and “ Column letter “ 5. Record using “ Tallies “ per species found within sample 6. Capture anything interesting “ Take Picture “ 7.Duplicate pictures taken 8.Make sure measurement of species found is taken 9. Email Jennifer Maucher at Jennifer.maucher@noaa.gov , include pictures, questions and names of the species you “guess” you found.
Great South Bay, Long Island, New York Summer Phytoplankton Identification & Monitoring Program, Cercom, Molloy University, John Tanacredi Ph.D., Kyle F. Maurelli
Great South Bay, Long Island, New York Summer Phytoplankton Identification & Monitoring Program, Cercom, Molloy University, John Tanacredi Ph.D., Kyle F. Maurelli
CERCOM Reports
Phytoplankton Collection Methodologies: 80 micron Plankton Tow Net with sample bottle attachment
Phytoplankton Protocol: 1.Gather Samples 2.Make one slide per sample 3.View slides using microscope connected with computer 4. Record findings using “ Row # “ and “ Colum letter “ 5. Record using “ Tally’s “ per species found within sample 6. Capture anything interesting “ Take Picture “ 7.Duplicate pictures taken 8.Make sure measurement of species found is taken 9. Email Jennifer Maucher at Jennifer.maucher@noaa.gov , include pictures, questions and names of the species you “guess” you found.
Long Island Horseshoe Crab Network Annual Inventory Report, Cercom, Molloy University, John Tanacredi Ph.D., Kyle F. Maurelli
Long Island Horseshoe Crab Network Annual Inventory Report, Cercom, Molloy University, John Tanacredi Ph.D., Kyle F. Maurelli
CERCOM Reports
CERCOM monitors 115 beach locations from Brooklyn – Montauk during optimal Limulus Polyphemus breeding season. These beach surveys take place for approximately 15 weeks, ranging from May- August. These beach locations are marked specifically using GPS coordinates, to assure the same location is visited each year. Students and volunteers are required to attend a HSC Survey training orientation lead by CERCOM’s research assistant, Mr. Kyle Maurelli. Surveying is done around tide and moon cycles (New/Full Moon). Each site takes about 1-2 hours and data is recorded along an approximate 1 mile distance. Walking along the water’s edge the number of …
Great South Bay, Long Island, New York Summer Phytoplankton Identification & Monitoring Program, Cercom, Molloy University, John Tanacredi Ph.D., Kyle F. Maurelli
Great South Bay, Long Island, New York Summer Phytoplankton Identification & Monitoring Program, Cercom, Molloy University, John Tanacredi Ph.D., Kyle F. Maurelli
CERCOM Reports
Phytoplankton Collection Methodologies: 80 micron Plankton Tow Net with sample bottle attachment
Phytoplankton Protocol: 1.Gather Samples 2.Make one slide per sample 3.View slides using microscope connected with computer 4. Record findings using “ Row # “ and “ Colum letter “ 5. Record using “ Tally’s “ per species found within sample 6. Capture anything interesting “ Take Picture “ 7.Duplicate pictures taken 8.Make sure measurement of species found is taken
Long Island Horseshoe Crab Network Annual Inventory Report, Cercom, Molloy University, John Tanacredi Ph.D., Kyle F. Maurelli
Long Island Horseshoe Crab Network Annual Inventory Report, Cercom, Molloy University, John Tanacredi Ph.D., Kyle F. Maurelli
CERCOM Reports
CERCOM monitors 115 beach locations from Brooklyn – Montauk during optimal Limulus Polyphemus breeding season. These beach surveys take place for approximately 15 weeks, ranging from May- August. These beach locations are marked specifically using GPS coordinates, to assure the same location is visited each year. Students and volunteers are required to attend a HSC Survey training orientation lead by CERCOM’s research assistant, Mr. Kyle Maurelli. Surveying is done around tide and moon cycles (New/Full Moon). Each site takes about 1-2 hours and data is recorded along an approximate 1 mile distance. Walking along the water’s edge the number of …
Great South Bay, Long Island, New York Summer Water Quality Monitoring Program, Cercom, Molloy University, John Tanacredi Ph.D., Kyle F. Maurelli
Great South Bay, Long Island, New York Summer Water Quality Monitoring Program, Cercom, Molloy University, John Tanacredi Ph.D., Kyle F. Maurelli
CERCOM Reports
The Center for Environmental Research and Coastal Oceans Monitoring (CERCOM) visits 11 locations in the Great South Bay from Memorial Day – Labor Day to monitor for dissolved oxygen (DO), pH, salinity, clarity and temperature. Students are trained and assist in CERCOM’s water quality data collection by research assistant Mr. Kyle Maurelli. This monitoring program has been conducted for the past 16 years. These parameters are critical in determining long term water quality conditions in Long Island estuaries.
Great South Bay, Long Island, New York Summer Phytoplankton Identification & Monitoring Program, Cercom, Molloy University, John Tanacredi Ph.D., Kyle F. Maurelli
Great South Bay, Long Island, New York Summer Phytoplankton Identification & Monitoring Program, Cercom, Molloy University, John Tanacredi Ph.D., Kyle F. Maurelli
CERCOM Reports
Phytoplankton Collection Methodologies: 80 micron Plankton Tow Net with sample bottle attachment
Phytoplankton Protocol: 1.Gather Samples 2.Make one slide per sample 3.View slides using microscope connected with computer 4. Record findings using “ Row # “ and “ Colum letter “ 5. Record using “ Tally’s “ per species found within sample 6. Capture anything interesting “ Take Picture “ 7.Duplicate pictures taken 8.Make sure measurement of species found is taken 9. Email Jennifer Maucher at Jennifer.maucher@noaa.gov , include pictures, questions and names of the species you “guess” you found.
Long Island Horseshoe Crab Network Annual Inventory Report, Cercom, Molloy University, John Tanacredi Ph.D., Kyle F. Maurelli
Long Island Horseshoe Crab Network Annual Inventory Report, Cercom, Molloy University, John Tanacredi Ph.D., Kyle F. Maurelli
CERCOM Reports
CERCOM monitors 115 beach locations from Brooklyn – Montauk during optimal Limulus Polyphemus breeding season. These beach surveys take place for approximately 15 weeks, ranging from MayAugust. These beach locations are marked specifically using GPS coordinates, to assure the same location is visited each year. Students and volunteers are required to attend a HSC Survey training orientation lead by CERCOM’s research assistant, Mr. Kyle Maurelli. Surveying is done around tide and moon cycles (New/Full Moon). Each site takes about 1-2 hours and data is recorded along an approximate 1 mile distance. Walking along the water’s edge the number of male …
Great South Bay, Long Island, New York Summer Water Quality Monitoring Program, Cercom, Molloy University, John Tanacredi Ph.D., Kyle F. Maurelli
Great South Bay, Long Island, New York Summer Water Quality Monitoring Program, Cercom, Molloy University, John Tanacredi Ph.D., Kyle F. Maurelli
CERCOM Reports
The Center for Environmental Research and Coastal Oceans Monitoring (CERCOM) visits 11 locations in the Great South Bay from Memorial Day – Labor Day to monitor for dissolved oxygen (DO), pH, salinity, clarity and temperature. Students are trained and assist in CERCOM’s water quality data collection by research assistant Mr. Kyle Maurelli. This monitoring program has been conducted for the past 16 years. These parameters are critical in determining long term water quality conditions in Long Island estuaries.
Daily Meteorological Report, Cercom, Molloy University, John Tanacredi Ph.D., Kyle F. Maurelli
Daily Meteorological Report, Cercom, Molloy University, John Tanacredi Ph.D., Kyle F. Maurelli
CERCOM Reports
Meteorological Methodologies and Equipment: - Davis 6152 Wireless Vantage Pro2 Weather Station - USGS Tide Gauge - NOAA Rain (precipitation) Gauge - Hand held salt water thermometer - Yard stick - NOAA anemometer CERCOM’s Research Assistant Mr. Kyle Maurelli is responsible for maintenance of co-op NWS weather station at CERCOM and submission of daily weather data to NOAA-NWS database 365 days per year.
Great South Bay, Long Island, New York Summer Water Quality Monitoring Program, Cercom, Molloy University, John Tanacredi Ph.D., Kyle F. Maurelli
Great South Bay, Long Island, New York Summer Water Quality Monitoring Program, Cercom, Molloy University, John Tanacredi Ph.D., Kyle F. Maurelli
CERCOM Reports
CERCOM visits 11 locations in Great South Bay to monitor dissolved oxygen (DO), pH, salinity, clarity, and temperature. This monitoring program has been conducted for the past 20 years. These parameters are critical in determining long-term water quality conditions in Long Island estuaries.
Great South Bay, Long Island, New York Summer Phytoplankton Identification & Monitoring Program, Cercom, Molloy University, John Tanacredi Ph.D., Kyle F. Maurelli
Great South Bay, Long Island, New York Summer Phytoplankton Identification & Monitoring Program, Cercom, Molloy University, John Tanacredi Ph.D., Kyle F. Maurelli
CERCOM Reports
Phytoplankton Collection Methodologies: 80 micron Plankton Tow Net with sample bottle attachment
Phytoplankton Protocol: 1.Gather Samples 2.Make one slide per sample 3.View slides using microscope connected with computer 4. Record findings using “ Row # “ and “ Colum letter “ 5. Record using “ Tally’s “ per species found within sample 6. Capture anything interesting “ take Picture “ 7.Duplicate pictures taken 8.Make sure measurement of species found is taken 9. Email Jennifer Maucher at Jennifer.maucher@noaa.gov , include pictures, questions and names of the species you “guess” you found.
Great South Bay, Long Island, New York Summer Water Quality Monitoring Program, Cercom, Molloy University, John Tanacredi Ph.D., Sixto E. Portilla
Great South Bay, Long Island, New York Summer Water Quality Monitoring Program, Cercom, Molloy University, John Tanacredi Ph.D., Sixto E. Portilla
CERCOM Reports
In 2016 the Center for Environmental Research and Coastal Oceans Monitoring (CERCOM) visited 9 locations in Great South Bay to monitor for dissolved oxygen (DO), pH, salinity, clarity, depth and temperature. This monitoring program has been conducted for the past 14 years. These parameters are critical in determining long-term water quality conditions in Long Island estuaries. Methodologies for monitoring parameters are provided by the Standard Methods for the Examination of Water and Wastewater 20th Edition (1998). Criteria for determining water quality conditions in marine eco-systems are based on the type of contact (uses) people have with the water system. The …
Long Island Horseshoe Crab Network Annual Inventory Report, Cercom, Molloy University, John Tanacredi Ph.D., Sixto E. Portilla
Long Island Horseshoe Crab Network Annual Inventory Report, Cercom, Molloy University, John Tanacredi Ph.D., Sixto E. Portilla
CERCOM Reports
Considerable concern regarding the abundance of the North American Horseshoe Crab (HSC), Limulus polyphemus, along the coasts of New Jersey and Delaware prompted past moratoriums on collecting HSC for bait in New Jersey. The parallel population decline in migratory shorebirds such as Red Knots, Calidris canutus, Ruddy Turnstones, Arenaria interpres, and others that seasonally feed on the copious quantities of HSC eggs laid along this shoreline resulted in reduced HSC collection permits to numbers considered sustainable. In New York State’s Marine District, which is mostly comprised of the Long Island coastline, there is no reliable or routine inventory network existing …
Great South Bay, Long Island, New York Summer Water Quality Monitoring Program, Cercom, Molloy University, John Tanacredi Ph.D., Sixto E. Portilla
Great South Bay, Long Island, New York Summer Water Quality Monitoring Program, Cercom, Molloy University, John Tanacredi Ph.D., Sixto E. Portilla
CERCOM Reports
The Center for Environmental Research and Coastal Oceans Monitoring (CERCOM) visits 15 locations in Great South Bay to monitor for dissolved oxygen (DO), pH, salinity, clarity, total and fecal coliforms and temperature. This monitoring program has been conducted for the past 13 years. These parameters are critical in determining long-term water quality conditions in Long Island estuaries. Methodologies for monitoring parameters are provided by the Standard Methods for the Examination of Water and Wastewater 20th Edition (1998). Criteria for determining water quality conditions in marine eco-systems are based on the type of contact (uses) people have with the water system. …
Great South Bay, Long Island, New York Summer Water Quality Monitoring Program, Cercom, Molloy University, John Tanacredi Ph.D., Sixto E. Portilla
Great South Bay, Long Island, New York Summer Water Quality Monitoring Program, Cercom, Molloy University, John Tanacredi Ph.D., Sixto E. Portilla
CERCOM Reports
The Center for Environmental Research and Coastal Oceans Monitoring (CERCOM) visits 15 locations in Great South Bay to monitor for dissolved oxygen (DO), pH, salinity, clarity, total and fecal coliforms and temperature. This monitoring program has been conducted for the past 13 years. These parameters are critical in determining long-term water quality conditions in Long Island estuaries. Methodologies for monitoring parameters are provided by the Standard Methods for the Examination of Water and Wastewater 20th Edition (1998). Criteria for determining water quality conditions in marine eco-systems are based on the type of contact (uses) people have with the water system. …
Long Island Horseshoe Crab Network Annual Inventory Report, Cercom, Molloy University, John Tanacredi Ph.D., Sixto E. Portilla
Long Island Horseshoe Crab Network Annual Inventory Report, Cercom, Molloy University, John Tanacredi Ph.D., Sixto E. Portilla
CERCOM Reports
Considerable concern regarding the abundance of the North American Horseshoe Crab (HSC), Limulus polyphemus, along the coasts of New Jersey and Delaware prompted past moratoriums on collecting HSC for bait in New Jersey. The parallel population decline in migratory shorebirds such as Red Knots, Calidris canutus, Ruddy Turnstones, Arenaria interpres, and others that seasonally feed on the copious quantities of HSC eggs laid along this shoreline resulted in reduced HSC collection permits to numbers considered sustainable. In New York State’s Marine District, which is mostly comprised of the Long Island coastline, there is no reliable or routine inventory network existing …