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Full-Text Articles in Physical Sciences and Mathematics

Data-Driven Multiscale Modeling Reveals The Role Of Metabolic Coupling For The Spatio-Temporal Growth Dynamics Of Yeast Colonies, Jukka Intosalmi, Adrian C. Scott, Michelle Hays, Nicholas Flann, Olli Yli-Harja, Harri Lähdesmäki, Aimée M. Dudley, Alexander Skupin Dec 2019

Data-Driven Multiscale Modeling Reveals The Role Of Metabolic Coupling For The Spatio-Temporal Growth Dynamics Of Yeast Colonies, Jukka Intosalmi, Adrian C. Scott, Michelle Hays, Nicholas Flann, Olli Yli-Harja, Harri Lähdesmäki, Aimée M. Dudley, Alexander Skupin

Computer Science Faculty and Staff Publications

Background: Multicellular entities like mammalian tissues or microbial biofilms typically exhibit complex spatial arrangements that are adapted to their specific functions or environments. These structures result from intercellular signaling as well as from the interaction with the environment that allow cells of the same genotype to differentiate into well-organized communities of diversified cells. Despite its importance, our understanding how this cell–cell and metabolic coupling lead to functionally optimized structures is still limited.

Results: Here, we present a data-driven spatial framework to computationally investigate the development of yeast colonies as such a multicellular structure in dependence on metabolic capacity. For this …


On Video Analysis Of Omnidirectional Bee Traffic: Counting Bee Motions With Motion Detection And Image Classification, Vladmir Kulyukin, Sarbajit Mukherjee Sep 2019

On Video Analysis Of Omnidirectional Bee Traffic: Counting Bee Motions With Motion Detection And Image Classification, Vladmir Kulyukin, Sarbajit Mukherjee

Computer Science Faculty and Staff Publications

Omnidirectional bee traffic is the number of bees moving in arbitrary directions in close proximity to the landing pad of a given hive over a given period of time. Video bee traffic analysis has the potential to automate the assessment of omnidirectional bee traffic levels, which, in turn, may lead to a complete or partial automation of honeybee colony health assessment. In this investigation, we proposed, implemented, and partially evaluated a two-tier method for counting bee motions to estimate levels of omnidirectional bee traffic in bee traffic videos. Our method couples motion detection with image classification so that motion detection …


A Structural Based Feature Extraction For Detecting The Relation Of Hidden Substructures In Coral Reef Images, Mahmood Sotoodeh, Mohammad Reza Moosavi, Reza Boostani Aug 2019

A Structural Based Feature Extraction For Detecting The Relation Of Hidden Substructures In Coral Reef Images, Mahmood Sotoodeh, Mohammad Reza Moosavi, Reza Boostani

Computer Science Student Research

In this paper, we present an efficient approach to extract local structural color texture features for classifying coral reef images. Two local texture descriptors are derived from this approach. The first one, based on Median Robust Extended Local Binary Pattern (MRELBP), is called Color MRELBP (CMRELBP). CMRELBP is very accurate and can capture the structural information from color texture images. To reduce the dimensionality of the feature vector, the second descriptor, co-occurrence CMRELBP (CCMRELBP) is introduced. It is constructed by applying the Integrative Co-occurrence Matrix (ICM) on the Color MRELBP images. This way we can detect and extract the relative …


A Novel Adaptive Lbp-Based Descriptor For Color Image Retrieval, Mohammad Sotoodeh, Mohammad Reza Moosavi, Reza Boostani Aug 2019

A Novel Adaptive Lbp-Based Descriptor For Color Image Retrieval, Mohammad Sotoodeh, Mohammad Reza Moosavi, Reza Boostani

Computer Science Student Research

In this paper, we present two approaches to extract discriminative features for color image retrieval. The proposed local texture descriptors, based on Radial Mean Local Binary Pattern (RMLBP), are called Color RMCLBP (CRMCLBP) and Prototype Data Model (PDM). RMLBP is a robust to noise descriptor which has been proposed to extract texture features of gray scale images for texture classification.

For the first descriptor, the Radial Mean Completed Local Binary Pattern is applied to channels of the color space, independently. Then, the final descriptor is achieved by concatenating the histogram of the CRMCLBP_S/M/C component of each channel. Moreover, to enhance …


Enabling Multi-Hop Remote Method Invocation In Device-To-Device Networks, Minh Le, Stephen Clyde, Young‑Woo Kwon Jun 2019

Enabling Multi-Hop Remote Method Invocation In Device-To-Device Networks, Minh Le, Stephen Clyde, Young‑Woo Kwon

Computer Science Faculty and Staff Publications

To avoid shrinking down the performance and preserve energy, low-end mobile devices can collaborate with the nearby ones by offloading computation intensive code. However, despite the long research history, code offloading is dilatory and unfit for applications that require rapidly consecutive requests per short period. Even though Remote Procedure Call (RPC) is apparently one possible approach that can address this problem, the RPC-based or message queue-based techniques are obsolete or unwieldy for mobile platforms. Moreover, the need of accessibility beyond the limit reach of the device-to-device (D2D) networks originates another problem. This article introduces a new software framework to overcome …


Introductory R For Water Resources - Fall 2019 - University Of North Carolina At Chapel Hill, David Gorelick, Gregory Characklis Jan 2019

Introductory R For Water Resources - Fall 2019 - University Of North Carolina At Chapel Hill, David Gorelick, Gregory Characklis

All ECSTATIC Materials

This is all course material for R for Researchers, a one-credit course taught at UNC Chapel Hill in Fall 2019 to introduce upperclassmen and graduate students to the R programming language and apply learned skills in basic water resources applications, as well as other (semi-related) topics of interest to students.

Lecture notes were distributed before (as a subset of full lecture notes) and after lectures, and lectures involved collaborative coding exercises with students in class without any powerpoint material. Course material here includes:

Syllabus: rough schedule and description of lectures

Lectures: pdf lecture notes with embedded code, including …


Research On The Law Of Garlic Price Based On Big Data, Feng Guo, Pingzeng Liu, Chao Zhang, Weijie Chen, Wei Han, Wanming Ren, Yong Zheng, Jianrui Ding Jan 2019

Research On The Law Of Garlic Price Based On Big Data, Feng Guo, Pingzeng Liu, Chao Zhang, Weijie Chen, Wei Han, Wanming Ren, Yong Zheng, Jianrui Ding

Computer Science Student Research

In view of the frequent fluctuation of garlic price under the market economy and the current situation of garlic price, the fluctuation of garlic price in the circulation link of garlic industry chain is analyzed, and the application mode of multidisciplinary in the agricultural industry is discussed. On the basis of the big data platform of garlic industry chain, this paper constructs a Garch model to analyze the fluctuation law of garlic price in the circulation link and provides the garlic industry service from the angle of price fluctuation combined with the economic analysis. The research shows that the average …


Development And Application Of Big Data Platform For Garlic Industry Chain, Weijie Chen, Guo Feng, Chao Zhang, Pingzeng Liu, Wanming Ren, Ning Cao, Jianrui Ding Jan 2019

Development And Application Of Big Data Platform For Garlic Industry Chain, Weijie Chen, Guo Feng, Chao Zhang, Pingzeng Liu, Wanming Ren, Ning Cao, Jianrui Ding

Computer Science Student Research

In order to effectively solve the problems which affect the stable and healthy development of garlic industry, such as the uncertainty of the planting scale and production data, the influence factors of price fluctuation is difficult to be accurately analyzed, the difficult to predict the trend of price change, the uncertainty of the market concentration, and the difficulty of the short-term price prediction etc. the big data platform of the garlic industry chain has been developed. Combined with a variety of data acquisition technology, the information collection of influencing factors for garlic industry chain is realized. Based on the construction …