Physical Sciences and Mathematics Commons^™

The Characterization And Electrochemistry Of Natural Uranium Dioxide Under Long-Term Disposal Conditions, Martin D. M. Badley

Electronic Thesis and Dissertation Repository

This thesis describes the studies performed on a number of natural uranium dioxide (UO₂) specimens to determine a range of reactivities. This work will support the safety case for the long-term disposal of spent nuclear fuel in Canada. Under relevant long-term disposal conditions, water radiolysis could produce oxidizing conditions at the surface of the fuel, potentially leading to fuel corrosion and the release of radionuclides into the groundwater. The rate of such a process would be determined by the radiation dose rate from the fuel and the reactivity of the fuel, which will be determined by its composition, …

Multi-Species Toxicity Testing Of Iprnhc: A Candidate For Organic Coating Enhancements, Maryam Khalilvand Nahid

Electronic Thesis and Dissertation Repository

Corrosion is a natural process affecting the longevity and integrity of metals. N-Heterocyclic carbenes (NHCs) are robust organic compounds that can form strong σ-bonds with metal atoms, allowing for the formation of monolayers on the metal surface. This property makes NHCs promising for coating metals. However, their long-term effects on the aquatic environment are not well understood. The present study investigated the ecotoxicity of 1,3-diisopropyl-1H-benzoimidazolium bicarbonate (iPrNHC NCO₃^-), a candidate for organic coating enhancements, on various species of aquatic organisms. The results showed that high concentrations of iPrNHC significantly increased mortality rates in zebrafish embryos, planarians, Daphnia, …

Investigating The Stability Of Different Sizes Of Gold Nanoparticles In Physiological Environments And Different Gold Nanoclusters In Water., Narges Hajighasemi

Electronic Thesis and Dissertation Repository

Gold nanoparticles (AuNPs) have become promising candidates for various biomedical applications due to their unique physicochemical properties and biocompatibility. Nevertheless, the efficacy of AuNPs in these applications highly relies on their stability and ability to maintain their desired properties within the complex environment of the human body. This thesis investigates the stability and aggregation behavior of citrate-coated AuNPs in in-vitro physiological environments and nitrogen heterocyclic carbene (NHC)-coated gold nanoclusters (AuNCs) in water over time. Analytical techniques such as electrophoretic mobility, dynamic light scattering, and inductively coupled plasma mass spectrometry were employed. It was shown that cell media (in contrast to …

Investigating The Effect Of Bentonite Clay Compaction Density On The Corrosion Of Copper Materials, Claire Samantha Tully

Electronic Thesis and Dissertation Repository

As per international consensus on the best practice for managing used nuclear fuel (UNF), the Nuclear Waste Management Organization (NWMO) plan to isolate and contain UNF within a multiple-barrier system, underground in a deep geological repository (DGR). In the proposed design, used fuel bundles will be sealed in copper-coated carbon steel used fuel containers (UFCs), encased in blocks of highly compacted bentonite clay, and emplaced ~500-800 m (depending on host rock geology) below ground. Any gaps between the rock walls and the compacted bentonite blocks will be filled with a bentonite gap fill material (GFM).

The compacted bentonite material serves …

Exploring The Chemistry Of Bis(Azido)Phosphine Chalcogenides And The Pursuit Of Isolable Phosphinidene Chalcogenides, John Lortie

Electronic Thesis and Dissertation Repository

The study of low-coordinate species and the pursuit of interesting bonding motifs has revealed new reactivity modes for main-group compounds, akin to transition metals, in the past two decades. An underexplored class of two-coordinate phosphorus compound is a phosphinidene sulfide, which has yet to be isolated in the solid-state with an accompanying crystal structure. This dissertation explores strategies towards the synthesis and reactivity of low-coordinate phosphinidene chalcogenide species, and related compounds supported by strongly pi-donating or weakly pi-donating environments. While the primary synthetic targets remained elusive, significant discoveries were made towards new methods of preparing electron rich phosphines, and the …

Investigating Co2 Adsorption Behavior In Metal-Organic Frameworks By Solid-State Nmr, Yan Ham Ng

Electronic Thesis and Dissertation Repository

With increasing demands in controlling carbon dioxide emissions, metal-organic frameworks (MOFs) are considered as promising candidates for CO₂ capture due to their large CO₂ adsorption capacity. In this study, the adsorption behavior of CO₂ molecules in [Zn₂(TRZ)₂(NH₂-BDC)] (TRZ=1,2,4-triazolate, NH₂-BDC=2-amino-1,4-benzenedicarboxylic acid), and CALF-20 are studied. Moreover, water is ubiquitous in the atmosphere and could have a negative impact on the MOF’s gas adsorption. Therefore, understanding the behavior and dynamics of water and CO₂ in MOFs is of fundamental importance. Solid-state nuclear magnetic resonance (SSNMR) is a powerful technique which …

Electrosprayed Serine Octamer Magic Number Cluster: Formation Via Gas Phase Assembly And Collision-Induced Dissociation, Vida Alinezhad

Electronic Thesis and Dissertation Repository

Magic number clusters refer to ion species that exhibit unusually high intensities in electrospray ionization (ESI) mass spectrometry (MS) experiments. The serine octamer cluster [Ser₈+H]⁺ is of special interest since its formation mechanism and structure remain controversial, although a recently proposed model in the literature represents a possible candidate structure. Nonetheless, the formation mechanism of [Ser₈+H]⁺ remains unexplored. Some hypotheses suggest that it may pre-exist in bulk solution, or that [Ser₈+H]⁺ can be a collision-induced dissociation (CID) product of large clusters formed in evaporating ESI droplets. We used ESI-MS, mobile proton …

Black Tio2 Nts And Zno-Tio2 Nts Heterostructure: Synthesis, Characterization, And Synchrotron-Based Spectroscopy Studies, Lu Yao

Electronic Thesis and Dissertation Repository

The one-dimensional (1D) TiO₂ nanotubes (NTs), and their derivatives have been extensively studied due to their potential use in water-splitting, solar cells, and lithium-ion batteries. Since TiO₂ has a large band gap (~3.2 eV for anatase), there has been a search for higher photocatalytic efficiency by shifting the band gap into the visible range. This thesis presents a study of black TiO₂ NTs and ZnO-TiO₂ heterostructures using synchrotron-based X-ray spectroscopy and X-ray diffraction techniques. It involves the transformation from as-prepared TiO₂ NTs to black TiO₂ NTs via an electrochemical reduction method. ZnO-TiO₂ NT …

Luminescent Group 11 Metal (I) Chalcogen Clusters With A Conjugated Diphosphine Ligand, Kai Yu Jeffrey Li

Electronic Thesis and Dissertation Repository

Polynuclear Au (I) complexes exhibit rich photochemical properties and have the potential to find applications as molecular sensors, switches, or energy storage devices. Although dinuclear Au (I) complexes with bridging diphosphines have been extensively examined, most of those reported do not contain rigid-diphosphine ligands.

This thesis examines how the rigid diphosphine, 4,6-bis(diphenylphosphino)dibenzofuran (DBFDP) can be incorporated for the controlled assembly of photoluminescent gold (I) metal – chalcogenolate (chalcogenolate = RS^-, RSe^-; R = organic moiety) and gold (I) chalcogenide (chalcogenide = S^2-, Se^2-) bimetallic complexes. In these studies, the chalcogen …

Exploring The Reactivity Of Metal-Ligand Cooperative Complexes With Dioxazolones, Terminal Alkynes, And 2-Ethynylbenzyl Alcohol, Megan A. Hoffer Miss

Electronic Thesis and Dissertation Repository

N-Acyl ketenimines were attempted to be synthesized catalytically by [Ru(Cp)(P^Ph₂N^Ph₂)(NCMe)]PF₆ with phenylacetylene and 3-phenethynyl-1,2,4-dioxazol-5-one. Trapping agents were employed to identify the major product of the reaction, as many products were formed. [Ru(Cp)(P^Ph₂N^Ph₂)(NCMe)]PF₆ reacts with 3-phenethynyl-1,2,4-dioxazol-5-one generating an isocyanate via the Curtius rearrangement, confirmed by a forced Curtius rearrangement with 3-phenethynyl-1,2,4-dioxazol-5-one and 1,2,4-triazole. Rates of vinylidene formation using [Ru(Cp)(P^Ph₂N^Ph₂)(NCMe)]PF₆ and various terminal alkynes of different sterics and electronics were evaluated using a Hammett analysis for and simple rate comparisons. …

Hydrogen Bond Activation Of Donor Acceptor Cyclopropanes, Matthew H.J. Pamenter

Electronic Thesis and Dissertation Repository

Donor acceptor cyclopropanes (DACs) are versatile organic building blocks used in the synthesis of many pharmaceutically relevant heterocycles. The combination of a high ring strain cyclopropane core and vicinal donor and acceptor substituents cause DACs to behave like 1,3-zwitterions. Recently, DACs have been activated by a hydrogen bond donor solvent in place of a Lewis acid catalyst, allowing the elimination of heavy metals commonly used in these transformations. Hexafluoroisopropanol (HFIP) as a hydrogen bond donor cosolvent was found to cause a downfield shift of the DACs electrophilic carbon in the 13C NMR spectrum. This indicates increased electrophilicity at this position …

Experimental And Simulation Study Of Reactive Silver Ink Droplet Evaporation, Weipeng Zhang

Electronic Thesis and Dissertation Repository

The evaporation of particle-free silver ink droplets on heated substrates directly impacts the morphology of the resultant silver particles and films. In this thesis, COMSOL Multiphysics simulations of the solvent (water-ethylene glycol mixture) droplet evaporation process are used to explain the microflows, mass transfers, and heat distribution responsible for the experimental observations. The reactive ink incorporates fluoro-surfactant FS-31 and poly (acrylamide) (PAM) to suppress the coffee-ring effect that negatively impacts the electrical conductivity. Experiments show that the droplet evaporation process results in varied silver particle morphology, depending on the locations within the droplet, leading to uneven surfaces. Large particles (3 …

Optimizing And Evaluating Zinc Oxide Nanoparticles As A Matrix For Matrix-Assited Laser/ Desorption Ionization Mass Spectrometry For Small Molecule Detection In Rodent Brain Tissue, Juan Pablo Galindo

Electronic Thesis and Dissertation Repository

Matrix-assisted laser/desorption ionization (MALDI) is the preferred method for mass spectrometry imaging (MSI) due to its high spatial resolution. Detecting small molecules like γ-aminobutyric acid (GABA) and glutamate, which are the main inhibitory and excitatory neurotransmitters respectively, proves challenging as their low masses conflict with background signals from most matrices.

This work optimizes zinc oxide nanoparticles (ZnO NP) as a matrix, focusing on GABA and Glutamate detection. Its absence of background signal makes ZnO suitable for small molecule detection. Its shortcomings, especially batch-to-batch variability, were mitigated through filtration and sonication before deposition, achieving high-resolution imaging of rat brain tissue sections. …

Structural Control Of Metallothionein Metallation And Oxidation, Natalie C. Korkola

Electronic Thesis and Dissertation Repository

Metallothioneins (MT) are a family of cysteine-rich metal-binding intrinsically disordered proteins that are ubiquitous across life. The proposed functions of MTs are to maintain Zn(II) homeostasis, participate in heavy metal detoxification, and protect against oxidative stress by binding to a variety of metals in a range of stoichiometries. However, due to their disordered nature and ability to form multiple metallated species, these diverse structures are not well characterized. Electrospray ionization mass spectrometry (ESI-MS) is a technique that allows quantification of heterogeneous metallation states through analysis of the speciation distributions. In this thesis, ESI-MS in combination with other spectroscopic techniques is …

Synthesis And Evaluation Of Novel Nucleotide Prodrugs Against Sars-Cov-2, Mohammed Attaelmanan

Electronic Thesis and Dissertation Repository

Positive sense RNA (ribonucleic acid) viruses (+ssRNA) are the known causative agents of diseases throughout history. These includes Hepatitis C Virus (HCV), SARS-CoV, and recently SARS-CoV-2. RNA dependent RNA polymerase (RdRp), a critical enzyme in the life cycle of the virus, can be targeted by using nucleotide antivirals thus causing inhibition. Novel ribonucleotides antiviral agents that possess nucleobase modifications and a 5′-phosphoramidate prodrug moiety, referred to as a ProTide, have been synthesized. The ribonucleoside analogues were constructed by CuI catalyzed azide-alkyne cycloaddition chemistry (CuAAC), also referred to as ‘click’ chemistry. The synthetic route utilized 5-ethynylpyrimidines and azidoribofuranoses as CuI ‘click’ …

Protein Stability In Solution And In The Gas Phase., Yousef Haidar

Electronic Thesis and Dissertation Repository

Electrospray Ionization mass spectrometry (ESI-MS) is widely used for probing proteins, yet many aspects of this technique remain elusive. Using MS, ion mobility spectrometry (IMS), and circular dichroism (CD) spectroscopy, this thesis sheds light on the stability differences of proteins in the gas phase and solution. After a general introduction (Chapter 1), Chapter 2 scrutinizes some aspects of native ESI. Our data highlight the significance of cone voltage in maintaining a native-like fold and show the advantage of using NH₄Ac in protein experiments. Chapter 3 focuses on hydrogen/deuterium exchange (HDX)-MS. Several studies have reported that D₂O …

Synchrotron Study Of Phase Transition And Heterostructures In Metal Oxide Semiconductors, Bingyu Dong

Electronic Thesis and Dissertation Repository

Transition metal oxides, including titanium dioxide (TiO₂), zinc oxide (ZnO) and Tin dioxide (SnO₂) are widely recognized semiconducting photocatalysts. This project engages in a detailed examination of the phase transition of TiO₂ and the synthesis of heterostructured metal oxides using an eco-friendly method of ball-milling. A variety of spectroscopy and microscopy techniques have been used to analyze the products. Synchrotron-based techniques: X-ray Absorption near-edge spectroscopy (XANES), X-ray Emission Spectroscopy and X-ray excited optical luminescence (XEOL) can demonstrate the local structure and bonding. The finding highlights a phase transition in TiO₂ and the formation of …

The Effect Of Hydrogen Peroxide On The Corrosion Dynamics Of Carbon Steel, Kwang Soak Gabriel O'Donnell

Electronic Thesis and Dissertation Repository

The Used Fuel Container (UFC) is a key barrier in Canada’s nuclear fuel disposal plan. Understanding the radiation-induced corrosion of the carbon steel (CS) vessel is critical for predicting the long-term integrity of the UFC. Developing a mechanistic understanding of CS corrosion and the effect of solution parameters is essential.

This work investigates the effects of H₂O₂, the key radiolytic oxidant, on CS corrosion dynamics in small, stagnant solutions. Elementary processes are identified, corrosion rates are calculated, and the effects of H₂O₂ concentration are investigated. Corrosion was studied by quantifying the concentrations of …

Investigating Novel Luminescent Materials Towards Applications In Light Emitting Electrochemical Cells, Kenneth Chu

Electronic Thesis and Dissertation Repository

The search for new and better luminescent materials is becoming increasingly important, as there are significant cost-savings in using luminophores that are brighter and more efficient. Carbon quantum dots (CQDs) and other luminescent materials such as Pt-Ag nanoclusters and TADF compounds are an extremely appealing alternative to existing light-emitting materials, as they are low-cost, easy to synthesize, and non-toxic.

This thesis explores the properties and performance of different luminescent materials to be used in light-emitting electrochemical cells (LECs). In this work, we focused on LECs as their low cost and ease of fabrication aligns well with the ethos of CQDs …

Application Of Crystal Engineering In Multicomponent Pharmaceutical Crystals: A Study Of Theory And Practice, Soroush Ahmadi Nasrabadi

Electronic Thesis and Dissertation Repository

Multicomponent crystallization, a prominent strategy in crystal engineering, offers the ability to modify the physicochemical properties of crystals by introducing a secondary component to their lattice structure. Such multicomponent crystals have found widespread application in the pharmaceutical industry. This thesis explores the experimental screening, characterization, application, and theoretical prediction of multicomponent crystals of Active Pharmaceutical Ingredients (APIs).

The first case study investigates a new solvate of Dasatinib which exhibits high instability at room temperature and transforms into a different polymorph upon desolvation. The crystal structure of this compound is obtained, revealing insights into its transient nature and the potential application …

The Effect Of Solution Parameters On The Interfacial Chemical Dynamics Of Early-Stage Corrosion, Brianna K. Rector

Electronic Thesis and Dissertation Repository

Corrosion is a key long-term degradation process for metallic components in nuclear industry infrastructure. Accurately predicting the corrosion rate of a component in its service environment is considered a grand challenge in the corrosion community. Corrosion is a multi-step electrochemical process, with elementary steps involving mass transfer across more than one stage. Due to the multi-step, multi-phase nature of corrosion systems, predicting corrosion behaviour over time is complex. Existing corrosion models can describe electron transfer and mass transport steps independently, under narrow sets of conditions or over a specified duration but cannot account for the changes that occur over time …

A Highly Charged Topic: Intrinsically Disordered Proteins And Protein Pka Values, Carter J. Wilson

Electronic Thesis and Dissertation Repository

Intrinsically disordered proteins (IDPs) are known not only for their roles in disease but also for their conformational flexibility, which makes them elusive for experimentation. We consider the role played by theory and simulation in resolving important questions pertaining to IDP structure and dynamics, as well as the nature of the charged residues (e.g., glutamate, lysine, etc.) that enrich them. Specifically, we investigated how the deep learning trained AlphaFold2 (AF2) predictor estimates disorder content, revealing both strong performance in relation to conventional approaches and an important relationship between the AF2 confidence metric and IDP dynamics. We also assessed how modern …

The Synthesis And Characterization Studies Of Modified Nucleobase In Pna And Dna, Gyeongsu Park

Electronic Thesis and Dissertation Repository

Nucleic acids have been extensively studied not only for their importance in biological systems as the medium of genetic information but also for their potential uses in therapeutic, diagnostic and other biological applications. As such, modified oligonucleotides and oligonucleotide analogues have drawn the attention of researchers from various disciplines. Modification of oligonucleotides can enhance their desired characteristics and engender unique properties, such as fluorescence, giving rise to a variety of applications. Peptide nucleic acid (PNA) is an oligonucleotide mimic with a pseudo-peptide backbone based on N-(2-aminoethyl)glycine that is renowned for high target binding affinity and resistance to enzyme degradation. …

Use Of Electrochemical Techniques And Statistical Analysis To Investigate The Pitting Probability Of Copper, Sina Matin

Electronic Thesis and Dissertation Repository

The development of a safe permanent disposal plan is essential for the long-term disposal of used fuel bundles. Nuclear Waste Management Organization (NWMO) has been investigating the deep geologic disposal of nuclear waste which offers the optimum passive safety system with a negligible probability of release of radionuclides into the environment.

The proposed used fuel containers (UFC) for the permanent disposal of high-level nuclear waste in Canada is comprised of a carbon steel vessel coated with a 3 mm corrosion-resistant copper layer deposited using a combination of electrodeposition and cold spray deposition. Although copper is often considered to be thermodynamically …

Investigating The Structure Of Metal-Organic Frameworks And The Behaviors Of Adsorbed Guest Molecules In Mofs Via Solid-State Nmr Spectroscopy, Yihao Shen

Electronic Thesis and Dissertation Repository

Metal-organic frameworks (MOFs) are a class of hybrid organic-inorganic microporous materials with lots of significant applications including gas capture and storage, gas separation, batteries, catalysis, ion exchange and drug delivery. MOFs based on s-block metals are important due to their many practical applications. These MOFs are also very interesting because the s-block MOFs often exhibit unpredictable behavior of coordination. In this thesis, the structures of six s-block metal (Li, Na, Cs, Mg, Ca, Sr) based MOFs involving V-shaped link, 4, 4′- sulfonyldibenzoate (SDB) are characterized by various techniques including, powder X-ray diffraction, TGA and solid-state NMR spectroscopy. ¹³C CPMAS …

Oligo [Poly(Ethylene Glycol) Fumarate] Gels With Photo-Sensitive Pendent Groups, Andrew Chung

Electronic Thesis and Dissertation Repository

Stimuli-responsive hydrogels are 3D polymeric structures that offer attractive qualities within the biomedical field due to their excellent biocompatibility and tunability to be employed in drug release, wound healing, and implants. Aliphatic polyesters are biodegradable polymers that naturally degrade by the process of simple ester hydrolysis. Oligo[poly(ethylene glycol) fumarate] (OPF) is a linear polyester containing repeating units of poly(ethylene glycol) and unsaturated fumarate. OPF naturally degrades through hydrolytic cleavage into poly(ethylene glycol) (PEG) and fumaric acid which is a naturally occurring compound found in the Kreb’s cycle. However, in some cases, it would be beneficial to activate or accelerate this …

Characterization Of Deposited Copper Oxide Films On Copper Substrates, Millicent Castillo

Electronic Thesis and Dissertation Repository

The deposition of copper oxide films on copper substrates was investigated by the electrochemical, thermal, and hydrothermal oxidation of copper. The formed oxides were characterized using various surface analytical techniques to determine the film’s morphology, composition, and thickness. The results show that by growing oxides electrochemically, a duplex layer composing of CuO and Cu₂O film was formed on the copper surface, having characteristics of being porous and possessing needle-like structures. An oxide film composed of CuO and Cu₂O, which shows minimal porosity and possess mixtures of crystalline and non-crystalline structures, is formed on the copper surface …

Synthesis Of Ni(Ii) Complexes For Allylic C(Sp3)-H Bond Activation For Aerobic Oxidation Catalysis, Shagana Kukendran

Electronic Thesis and Dissertation Repository

Nickel is a widely abundant and inexpensive metal. Catalysts are substances that remain unconsumed and increase the rate of reactions by reducing the activation energy barrier, often by providing an alternative route. The main goal of this study is to prepare Ni(II) complexes that can promote a catalytic aerobic oxidation reaction by breaking allylic C-H bonds. Based on previous studies, allylnickel N-heterocyclic carbene complexes react with molecular oxygen to give useful carbonyl compounds with a Ni(II)-OH by-product, which undergoes dimerization. In order to achieve catalysis, dimerization of the Ni(II)-OH should be prevented and C-H activation has to be achieved to …

Synthesis And Surface Modification Of Azide Decorated Silver Nanoclusters, Alexander H. Stöckli

Electronic Thesis and Dissertation Repository

In nanocluster research, easy modification of the cluster surface while maintaining the cluster core remains a key challenge. Herein we report the synthesis, structure, and properties of four targeted Ag₂₀ nanoclusters (NCs) with surface azide moieties, two of which have 8 azide moieties, [CO₃@Ag₂₀(S^tBu)₁₀(m-N₃-C₆H₄COO)₈(DMF)₄] and [CO₃@Ag₂₀(S^tBu)₁₀(p-N₃-C₆H₄COO)₈(DMF)₄], and two of which have 6 azide moieties, [CO₃@Ag₂₀(S …

Near-Ir Laser Ablation Of Simulated Radiologically Contaminated Oxides On Carbon Steel Feeder Pipes, Thao Viet Do

Electronic Thesis and Dissertation Repository

As nuclear power plants age and retire from service, many countries face significant challenges concerning the safe long-term storage and disposal of large volumes of low and intermediate level radioactive wastes (L&ILW). The volumes of metallic waste are of particular concern, as when metal corrodes it produces hydrogen that could lead to pressure build-up in interim storage and disposal. In Canada, a significant fraction of the metallic wastes for Canada Deuterium Uranium (CANDU) nuclear reactors are out-of-core reactor components, such as carbon steel (CS) feeder pipes. The radioactive contamination is expected to be largely confined to the surface oxide layers …