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Biotechnology

Philip Shapira

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Full-Text Articles in Physical Sciences and Mathematics

Mapping The Patent Landscape Of Synthetic Biology For Fine Chemical Production Pathways, Pablo Carbonell, Abdullah Gok, Philip Shapira, Jean-Loup Faulon Dec 2015

Mapping The Patent Landscape Of Synthetic Biology For Fine Chemical Production Pathways, Pablo Carbonell, Abdullah Gok, Philip Shapira, Jean-Loup Faulon

Philip Shapira

A goal of synthetic biology bio-foundries is to innovate through an iterative design/build/test/learn pipeline. In assessing the value of new chemical production routes, the intellectual property (IP) novelty of the pathway is important. Exploratory studies can be carried using knowledge of the patent/IP landscape for synthetic biology and metabolic engineering. In this paper, we perform an assessment of pathways as potential targets for chemical production across the full catalogue of reachable chemicals in the extended metabolic space of chassis organisms, as computed by the retrosynthesis-based algorithm RetroPath. Our database for reactions processed by sequences in heterologous pathways was screened against …