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Full-Text Articles in Physical Sciences and Mathematics

E-Science @ Umass: Anticipating And Supporting E-Science Activities At The University Of Massachusetts, Maxine G. Schmidt, Rebecca Reznik-Zellen Jul 2009

E-Science @ Umass: Anticipating And Supporting E-Science Activities At The University Of Massachusetts, Maxine G. Schmidt, Rebecca Reznik-Zellen

Maxine G Schmidt

In March of 2008 an Ad Hoccommittee of Science Librarians from the University of Massachusetts Five Campus System convened to discuss the challenges of e-science and prepare the Libraries for their role in e-science initiatives. Three primary outcomes intended to support e-science activities emerged from the work of the Ad Hoc committee.


E-Science @ The University Of Massachusetts, Maxine G. Schmidt, Rebecca Reznik-Zellen, Raquel Rivera, Cecilia P. Mullen Mar 2009

E-Science @ The University Of Massachusetts, Maxine G. Schmidt, Rebecca Reznik-Zellen, Raquel Rivera, Cecilia P. Mullen

Maxine G Schmidt

e-Science @ the University of Massachusetts Abstract: What is e-Science and how can libraries and librarians support it? The University of Massachusetts takes a proactive approach to support network-enabled research on its campuses and provides examples where e-Science is already at work. Statement: “e-Science” is a term commonly used to describe research in a networked environment, a growing trend not only in the sciences, but the arts and humanities as well. e-Science creates both opportunities and challenges for academic libraries. The opportunities lie in leveraging the basic skill set that libraries and librarians already possess: the knowledge of and practical …


Uniqueprimer - A Web Utility For Design Of Specific Pcr Primers And Probes, Torstein Tengs Jan 2009

Uniqueprimer - A Web Utility For Design Of Specific Pcr Primers And Probes, Torstein Tengs

Dr. Torstein Tengs

We have developed a web-based tool for design of specific PCR primers and probes. The program allows you to enter primer sequence information as well as an optional probe, and sequence similarity searches (MegaBLAST) will be performed to see if the sequences match the same sequence entry in the specified database. If primers (and probe) match, this will be reported. The program can handle overlapping amplicons, amplification from a single primer, ambiguous bases and other problematic cases.


Potential Of Spent Mushroom Substrate In Vermicomposting, Adi Ainurzaman Jamaludin, Noor Zalina Mahmood Jan 2009

Potential Of Spent Mushroom Substrate In Vermicomposting, Adi Ainurzaman Jamaludin, Noor Zalina Mahmood

Adi Ainurzaman Jamaludin

The potential of spent mushroom substrate from saw dust in vermicomposting were found out through the growth and reproduction of earthworms including the nutrient elements of vermicompost produced at the end of vermicomposting. Five treatments in different ratio of cow dung : spent mushroom substrate were prepared as feed materials with four replicates for each treatment namely; 80:20 (T1), 60:40 (T2), 50:50 (T3), 40:60 (T4) and 20:80 (T5). After 3 weeks of pre-composting followed by 7 weeks of vermicomposting, T4 showed the highest percentage of growth and reproduction where mean of earthworms’ numbers increases (M = 295.00, SD = 17.32, …


A Quantitative Taqman Mgb Real-Time Polymerase Chain Reaction Based Assay For Detection Of The Causative Agent Of Crayfish Plague Aphanomyces Astaci, Torstein Tengs Jan 2009

A Quantitative Taqman Mgb Real-Time Polymerase Chain Reaction Based Assay For Detection Of The Causative Agent Of Crayfish Plague Aphanomyces Astaci, Torstein Tengs

Dr. Torstein Tengs

Here we present the development and first validation of a TaqMan minor groove binder (MGB) real-time polymerase chain reaction (RT-PCR) method for quantitative and highly specific detection of Aphanomyces astaci, the causative agent of crayfish plague. The assay specificity was experimentally assessed by testing against DNA representative of closely related oomycetes, and theoretically assessed by additional sequence similarity analyses comparing the primers and probe sequences to available sequences in EMBL/GenBank. The target of the assay is a 59 bp unique sequence motif of A. astaci found in the internal transcribed spacer 1 of the nuclear ribosomal gene cluster. A standard …


Umass Libraries 2009, Maxine G. Schmidt Jan 2009

Umass Libraries 2009, Maxine G. Schmidt

Maxine G Schmidt

No abstract provided.