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Physical Sciences and Mathematics Commons

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Bioinformatics

Wayne State University

2018

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Qualitative Change Detection Approach For Preventive Therapies, Cristina Mitrea Jan 2018

Qualitative Change Detection Approach For Preventive Therapies, Cristina Mitrea

Wayne State University Dissertations

Currently, most diseases are diagnosed only after disease-associated changes have occurred. In this PhD dissertation, we propose a paradigm shift from treating the disease to maintaining the healthy state. The proposed approach is able to identify when systemic qualitative changes in biological systems happen, thus opening the possibility of therapeutic interventions before the occurrence of symptoms. The change detection method exploits knowledge from biological networks and longitudinal data using a system impact analysis approach. This approach is validated on eight datasets, for seven different model organisms and eight biological phenomena. On these data, our proposed method performs well, consistently identifying …