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Biogeochemistry

Theses/Dissertations

2017

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Articles 1 - 26 of 26

Full-Text Articles in Physical Sciences and Mathematics

Rethinking Holocene Ecological Relationships Among Caribou, Muskoxen, And Human Hunters On Banks Island, Nwt, Canada: A Stable Isotope Approach, Jordon S. Munizzi Dec 2017

Rethinking Holocene Ecological Relationships Among Caribou, Muskoxen, And Human Hunters On Banks Island, Nwt, Canada: A Stable Isotope Approach, Jordon S. Munizzi

Electronic Thesis and Dissertation Repository

This dissertation explores the ecology of caribou (Rangifer tarandus spp.) and muskoxen (Ovibos moschatus), and its relevance to human hunters on Banks Island, NWT, Canada, over the last 4000 years, primarily through the isotopic analysis of modern and archaeological faunal remains.

First, we establish baseline carbon and nitrogen isotope relationships between modern vegetation and caribou and muskox bone collagen using Bayesian mixing models. The models indicate that dwarf shrub (Salix arctica) does not contribute significantly to bone collagen isotopic compositions in either species, while sedges and yellow lichen (Cetraria tilesii) do. These findings …


Evaluating Potential For Water Quality Decline In Maine Lakes, Kaci N. Fitzgibbon Dec 2017

Evaluating Potential For Water Quality Decline In Maine Lakes, Kaci N. Fitzgibbon

Electronic Theses and Dissertations

Understanding lake vulnerability with respect to eutrophication and loss of water quality is important for sustainability of aquatic ecosystems. This project aims at identifying and quantifying the effects of relevant physiochemical, climate, and watershed characteristics on lake vulnerability in order to develop management decision tools for the Maine Department of Environmental Protection (MEDEP). In a changing chemical and physical environment, using independent variables from each of these categories and then relating them to the summer lake epilimnetic phosphorus (P) concentrations allows for development of models to inform stakeholders of lake vulnerability to eutrophication problems.

We studied 24 lakes covering a …


Mapping Soil Organic Carbon (Soc) In A Semi-Arid Mountainous Watershed Using Variables From Hyperspectral, Lidar And Traditional Datasets, Ryan Matthew Will Dec 2017

Mapping Soil Organic Carbon (Soc) In A Semi-Arid Mountainous Watershed Using Variables From Hyperspectral, Lidar And Traditional Datasets, Ryan Matthew Will

Boise State University Theses and Dissertations

Quantifying soil organic carbon (SOC) in complex terrain is challenging due to its high spatial variability. Generally, limited discrete observations of SOC data are used to develop spatially distributed maps of SOC by developing quantitative relationships between SOC and available spatially distributed variables. In many ecosystems, remotely sensed information on aboveground vegetation can be used to predict belowground carbon stocks. In this research, we developed maps of SOC across a semi-arid watershed based on discrete field observations and modeling using a suite of variables inclusive of hyperspectral and lidar datasets; these observations provide insights into the controls on soil carbon …


Floodplain Impacts On Water Quality: A Case Study In Southern Louisiana, Emily Delduco Nov 2017

Floodplain Impacts On Water Quality: A Case Study In Southern Louisiana, Emily Delduco

LSU Master's Theses

The quantity and quality of dissolved carbon delivered to coastal margins by rivers is an important component of global carbon cycling. The Atchafalaya River (AR) discharges ~25% of the flow of the Mississippi River (MR) and the total flow of the Red River (RR) into the Gulf of Mexico (GoM) annually while flowing through the largest bottomland swamp in North America. This provides a unique opportunity to study floodplain impacts on dissolved carbon processes in a large river system. The research aimed to: (1) determine DIC and DOC transport and processing by a river swamp basin under varied seasons and …


Arctic And North Atlantic Paleo-Environmental Reconstructions From Lake Sediments, Gregory A. De Wet Nov 2017

Arctic And North Atlantic Paleo-Environmental Reconstructions From Lake Sediments, Gregory A. De Wet

Doctoral Dissertations

ABSTRACT

ARCTIC AND NORTH ATLANTIC PALEO-ENVIRONMENTAL RECONSTRUCTIONS FROM LAKE SEDIMENTS MAY 2017 GREGORY A. DE WET, B.Sc., BATES COLLEGE M.Sc., UNIVERSITY OF MASSSCHUSETTS, AMHERST Ph.D., UNIVERSITY OF MASSACHUSETTS, AMHERST Directed by: Drs. Raymond S. Bradley and Isla S. Castañeda There are few fields in the discipline of Earth Science that hold more relevancy in 2017 than studies of earth’s climate. Called the “perfect problem” considering its complexity and magnitude, climate change will continue to be one of the greatest challenges humanity will face in the 21st century. And while numerical models provide valuable information on conditions in the future, …


Linking Mining Wastewater Discharge To Methylmercury Production In A Sub-Arctic Peatland, Lauren E. Twible Sep 2017

Linking Mining Wastewater Discharge To Methylmercury Production In A Sub-Arctic Peatland, Lauren E. Twible

Electronic Thesis and Dissertation Repository

It is well established that the addition of sulphate (SO42-) to peatlands increases methylmercury (MeHg) concentrations in pore waters via microbial methylation. Less information exists about the effects of different concentrations and sources of SO42- loading on MeHg production in remote, non- SO42- impacted regions like Canada’s north, where increased SO42- loadings come not from the atmosphere, but often from mining waste water and rock tailings. A three year field study (two years of loading; one year of recovery) examined the effects of simulated wastewater (containing 27.2 mg/L SO42- …


Genetic And Biological Studies On Solanum Plants: Insights Into The Leaf Wax Alkane Paleoclimate Proxy, Amanda Lorraine Dorothy Bender Aug 2017

Genetic And Biological Studies On Solanum Plants: Insights Into The Leaf Wax Alkane Paleoclimate Proxy, Amanda Lorraine Dorothy Bender

Arts & Sciences Electronic Theses and Dissertations

The hydrogen isotopic composition (δ2H) of precipitation records fluxes of water in the hydrological cycle, and can reflect climatic variables such as temperature and humidity. Leaf wax n-alkanes can record δ2H of precipitation; consequently, n-alkanes extracted from sedimentary archives are commonly used as proxies for paleoenvironmental reconstruction. However, the utility of the leaf wax paleoclimate proxy is modulated by uncertainty about how physiological processes affect hydrogen isotopic compositions during alkane biosynthesis. This work aims to improve our understanding of the leaf wax paleoclimate proxy by examining biological and environmental sources of variability on cuticular leaf waxes. We used Solanum (tomato) …


Methylmercury Production In Two Northern Fen Peatlands, Mikhail J. Mack Jul 2017

Methylmercury Production In Two Northern Fen Peatlands, Mikhail J. Mack

Electronic Thesis and Dissertation Repository

Northern peatlands provide conditions favourable for sulphate reducing bacteria, microorganisms responsible for producing methylmercury, an aquatic pollutant. An expected climate driven shift from moss- to sedge-dominance may alter mercury biogeochemistry. Observations from a moss-dominated poor fen and sedge-dominated intermediate fen were used to compare methylmercury to assess if contrasting plant communities, nutrients status and/or hydrologic regime control production. Chapter 2 compared porewater methylmercury and ancillary chemistry across two Northern Ontario fens. The lower water table, greater dissolved organic carbon, and lower pH in the poor fen resulted in 3.1 times greater methylmercury. Chapter 3, riparian zones in intermediate fen were …


Influence Of Common Bean (Phaseolus Vulgaris) Grown In Elevated Co2 On Apatite Dissolution, Brian Matthew Morra May 2017

Influence Of Common Bean (Phaseolus Vulgaris) Grown In Elevated Co2 On Apatite Dissolution, Brian Matthew Morra

Electronic Theses and Dissertations

Elevated concentrations of atmospheric CO2 brought about by human activity creates changes in plant morphology, growth rate and exudate production. Our study sought to understand the effect of these changes on soil mineral weathering using plants grown under two conditions, ambient CO2 (400ppm) and elevated CO2 (1000ppm). Phaseolus vulgaris (common beans) were grown in flow-through microcosms consisting of a mixture of quartz and apatite sands. Plant growth was sustained by a nutrient solution devoid of calcium (Ca) and phosphorous (P). Using Atomic Adsorption Spectroscopy and colorimetry, Ca and P content of the leachate and plant tissue served …


Revealing The Current Relationship Between Stream Acidification And Fish Species Richness: What Is The Status After Two Decades Of Recovery?, Patrick A. Harmon May 2017

Revealing The Current Relationship Between Stream Acidification And Fish Species Richness: What Is The Status After Two Decades Of Recovery?, Patrick A. Harmon

Masters Theses, 2010-2019

Prior to limitations placed on atmospheric emission of sulfur dioxide, Shenandoah National Park streams were heavily impacted by acid deposition. Acidification of these streams resulted in a depletion of acid neutralizing capacity (ANC) and a loss of fish species diversity. Differences in bedrock composition of park watersheds produce variation in stream response to acidification such that siliciclastic watersheds provide the lowest ANC, basaltic-carbonate watersheds provide the highest ANC, and granitic watersheds provide an intermediate ANC. Previous results by Bulger et al. (1995) indicated a significant relationship between ANC and fish species richness in thirteen park streams, such that low ANC …


Biogeochemical Characteristics Of Organic Matter In A Karst Groundwater System, Teresa Lynn Brown May 2017

Biogeochemical Characteristics Of Organic Matter In A Karst Groundwater System, Teresa Lynn Brown

Doctoral Dissertations

Development of regional groundwater carbon budgets hinges on the ability to quantify and monitor biogeochemical processes controlled by microbial recycling of natural dissolved organic matter (DOM) in carbon-limited (oligotrophic) areas. DOM is the major reservoir of organic carbon in aquatic ecosystems. However, isolation and characterization of DOM in oligotrophic freshwater systems has been limited by operational protocols and instrumentation. The goals of this research were to investigate the seasonal dynamics of microbially-driven organic matter degradation in a karst groundwater system influenced by surface water, and to identify analytical tools and biomarkers to measure long-term hydro-ecological trends in the Appalachian region. …


Influence Of Environmental Conditions And Inundation History On Bacterial Diversity Of Salt Marsh Soils In Southern Louisiana, Brandon M. Bagley May 2017

Influence Of Environmental Conditions And Inundation History On Bacterial Diversity Of Salt Marsh Soils In Southern Louisiana, Brandon M. Bagley

Masters Theses

Diversity patterns and controls on bacterial community composition were investigated from coastal salt marsh soils in southern Louisiana (USA) from 2012 – 2014. These salt marshes are part of an extensive coastal landscape that is experiencing land loss due to subsidence, sea-level rise, and anthropogenic activities, including from the impacts of the Deepwater Horizon oil spill in 2010. Prior to the oil spill, microbiology research focused predominately on biogeochemical roles and not on taxonomic representation in the soils or on understanding the significance of taxonomic diversity at the microbial level to marsh food webs or ecosystem dynamics. The purpose of …


Factors Controlling Diffusive Co2 Production And Transport In The Cedarburg Bog, Saukville, Wisconsin, Emily Kay Joynt May 2017

Factors Controlling Diffusive Co2 Production And Transport In The Cedarburg Bog, Saukville, Wisconsin, Emily Kay Joynt

Theses and Dissertations

Wetlands are vital components of the carbon cycle, containing an estimated 20-30% of the global soil carbon reservoir. The Cedarburg Bog of southeastern Wisconsin boasts a myriad of wetland habitats including the southernmost string bog found in North America. Soil carbon dioxide (CO2) behavior in these systems is the response of multiple interdependent variables that are, collectively, not well understood. Many studies have measured and modeled soil CO2 flux (soil respiration) based on isolated, intermittent measurements that do not account for the full range of soil CO2 flux intensity. In the Cedarburg Bog, high-resolution measurements of soil CO2 flux were …


Influence Of Algae On Soil Saturated Hydraulic Conductivity: An In Situ Treatment Option For Reducing Infiltration Beneath Unlined Algae Cultivation Ponds, Molly Brianne Pattullo May 2017

Influence Of Algae On Soil Saturated Hydraulic Conductivity: An In Situ Treatment Option For Reducing Infiltration Beneath Unlined Algae Cultivation Ponds, Molly Brianne Pattullo

Masters Theses

Commercial production of algal biofuels is currently limited by high capital costs, including the cost of installation and maintenance of plastic pond liners, which mitigate seepage of cultivation fluids and control the release of salts and nutrients into the subsurface beneath outdoor algae cultivation ponds. However, studies of animal waste settling lagoons show that underlying soils ranging from sands to clay loams can exhibit reduced hydraulic conductivity within days to weeks after construction, reducing the need for plastic liners. The mechanisms of the hydraulic conductivity reductions, or “soil sealing”, are physical rearrangement of soil particles, buildup of fines, and the …


Determining Sources Of Nitrate In The Semi-Arid Rio Grande Using Nitrogen And Oxygen Isotopes, Diego Alberto Sanchez Hernandez May 2017

Determining Sources Of Nitrate In The Semi-Arid Rio Grande Using Nitrogen And Oxygen Isotopes, Diego Alberto Sanchez Hernandez

Masters Theses

The Rio Grande, a semi-arid river in the American Southwest, is a major source of surface water for agriculture and drinking supplies in New Mexico and Texas. In addition to increasing salinity, considerable increases of NO3- [nitrate] have been observed in the semi-arid portion of the Rio Grande. It is possible that elevated water salinity inhibits denitrification on irrigated fields and, thus, fails to mediate excess nutrient load from anthropogenic activities. Therefore, two major goals of this project were to 1) characterize and quantify major NO3- sources, and 2) assess whether elevated water salinity affects microbial …


Riparian Buffered Sinkholes In The Blue River Watershed, Colin Copler Apr 2017

Riparian Buffered Sinkholes In The Blue River Watershed, Colin Copler

Undergraduate Theses

Riparian vegetation along streams has many positive effects on water quality and macroinvertebrate communities, especially in agricultural areas. Some of these effects include erosion prevention, pollutant removal, and lower summer water temperatures. There has been much research done examining the link between these riparian areas and streams; however, riparian vegetation is understudied in karst areas. Karst is a geologic formation that is composed of limestone, which dissolves in groundwater, forming sinkholes. Thus, the question this paper seeks to investigate is does riparian vegetation around sinkholes in a karst plain influence water quality within a watershed? Water quality, land cover, and …


Structural Basis Of Membrane Protein Scaffolding And Signaling In Human Disease, Joshua Holcomb Jan 2017

Structural Basis Of Membrane Protein Scaffolding And Signaling In Human Disease, Joshua Holcomb

Wayne State University Dissertations

Protein structural elucidation by means of X-ray crystallography is a powerful approach for both insight into a proteins biophysical properties and function. To date X-ray crystallography remains the gold standard in high resolution structural determination and serves as the basis for rational drug design for the purpose of combating a number of human diseases. Such an approach also allows for the exploitation of how various proteins interact with their substrates providing a molecular basis for their physiological function. In this dissertation, using X-ray crystallographic analysis along with other biophysical characterization methods, we seek to understand the mechanistic foundation for which …


Temporal Variability Of Fluorescent Dissolved Organic Matter At A Brackish, Tidal Marsh-Estuary Interface, Alana B. Menendez Jan 2017

Temporal Variability Of Fluorescent Dissolved Organic Matter At A Brackish, Tidal Marsh-Estuary Interface, Alana B. Menendez

Dissertations and Theses

Marshes are both terrestrial and aqueous, sitting as an intermediate between land and water. Studies over constrained numbers of tidal cycles have demonstrated that these marshes are net exporters of dissolved organic carbon (DOC) to adjoining estuaries, however, there is need for continuous monitoring to better understand the temporal variability of this flux: tidally, seasonally, and during episodic rain events. Through use of a YSI EXO2 sonde, an in situ optical sensor at the interface of the brackish, tidal Kirkpatrick Marsh and Rhode River sub-estuary in Edgewater, Maryland (located on the northwestern shore of the Chesapeake Bay), we were able …


Effects Of Silvopasture Establishment On Aqueous And Gaseous Soil N Losses At The University Of New Hampshire Organic Dairy Research Farm, Kathryn Ann Slebodnik Jan 2017

Effects Of Silvopasture Establishment On Aqueous And Gaseous Soil N Losses At The University Of New Hampshire Organic Dairy Research Farm, Kathryn Ann Slebodnik

Honors Theses and Capstones

The expansion of local agriculture in the New England region is putting increased pressure on farmers to expand their arable land base. While clear-cutting is a traditional method of converting forested land to agriculture, it is known for having adverse ecological impacts. To minimize these impacts, farmers can create a silvopasture which incorporates a portion of the original forest canopy into pastures or crop fields. This study evaluates the impact of land-use changes for agriculture on soil nitrogen (N) retention. In particular, this study investigates the differences in soil N turnover, gaseous loss, and aqueous loss among an established forest, …


Using High-Resolution Glider Data And Biogeochemical Modeling To Investigate Phytoplankton Variability In The Ross Sea, Daniel Edward Kaufman Jan 2017

Using High-Resolution Glider Data And Biogeochemical Modeling To Investigate Phytoplankton Variability In The Ross Sea, Daniel Edward Kaufman

Dissertations, Theses, and Masters Projects

As Earth’s climate changes, polar environments experience a disproportionate share of extreme shifts. Because the Ross Sea shelf has the highest annual productivity of any Antarctic continental shelf, this region is of particular interest when striving to characterize current and future changes in Antarctic systems. However, understanding of mesoscale variability of biogeochemical patterns in the Ross Sea and how this variability affects assemblage dynamics is incomplete. Furthermore, it is unknown how the Ross Sea may respond to projected warming, reduced summer sea ice concentrations, and shallower mixed layers during the next century. to investigate these dynamics and explore their consequences …


Impact Of Climate Change Variables On Nutrient Cycling By Marine Microorganisms In The Southern California Bight And Ross Sea, Antarctica, Jenna Lee Spackeen Jan 2017

Impact Of Climate Change Variables On Nutrient Cycling By Marine Microorganisms In The Southern California Bight And Ross Sea, Antarctica, Jenna Lee Spackeen

Dissertations, Theses, and Masters Projects

Ocean environments are being impacted by climate warming, elevated carbon dioxide (CO2) levels, and shifting nutrient sources and sinks. It is essential to quantify the sensitivity of microorganisms to these effects of global change because they form the base of the marine food web and are an integral component of nutrient cycling on the planet. their role in photosynthesis, nutrient uptake, and transfer of organic matter into higher trophic levels or to the deep ocean via the biological pump render microorganisms key in ecosystem structure and function and in regulating the global climate. The goal of this dissertation research was …


The Role Of Seabed Resuspension On Oxygen And Nutrient Dynamics In Coastal Systems: A Numerical Modeling Study, Julia Miege Moriarty Jan 2017

The Role Of Seabed Resuspension On Oxygen And Nutrient Dynamics In Coastal Systems: A Numerical Modeling Study, Julia Miege Moriarty

Dissertations, Theses, and Masters Projects

Seabed resuspension can impact organic matter fate and water column biogeochemistry in coastal environments. Cycles of erosion and deposition can, for example, affect remineralization rates, seabed-water column fluxes of dissolved oxygen and nutrients, and light attenuation. Yet, models that incorporate both sediment transport and biogeochemical processes are rare, and nearly all neglect the effect of resuspension on oxygen and nutrient dynamics. Development of a novel tool, i.e. a coupled hydrodynamic-sediment transport-biogeochemical model, allowed for an investigation of the role of resuspension on oxygen and nitrogen dynamics within three distinct coastal environments. Called HydroBioSed, the coupled model was built within the …


Marsh-Exported Dissolved Organic Matter Fate In Estuaries, Laura Ann Logozzo Jan 2017

Marsh-Exported Dissolved Organic Matter Fate In Estuaries, Laura Ann Logozzo

Dissertations and Theses

Dissolved organic matter (DOM) is a significant driver of estuarine productivity and nutrient cycling. The colored component of DOM, chromophoric dissolved organic matter (CDOM), impacts coastal optical properties, ocean color, and light attenuation. While marshes are largely considered sinks for carbon due to their high productivity and low soil carbon degradation rates, laterally they are sources of carbon as optically and chemically distinct DOM to surrounding aquatic ecosystems; these inputs are often essential in sustaining a net heterotrophic system. However, the photoreactivity and bioavailability of marsh-exported DOM is largely uncategorized, thus making it difficult to quantify its impacts on estuarine …


Nitrate Loading In The Saw Kill Watershed: Small Watershed Nutrient Dynamics, Answering A Community Question, And Assessing Methodological Approaches, Marco Sebastian Spodek Jan 2017

Nitrate Loading In The Saw Kill Watershed: Small Watershed Nutrient Dynamics, Answering A Community Question, And Assessing Methodological Approaches, Marco Sebastian Spodek

Senior Projects Spring 2017

Biogeochemical cycles mitigate the movement of nutrients through ecosystems at a variety of scales. Within aquatic systems, nitrogen (N) and phosphorus (P) are especially critical due to their high influence on primary production and decomposition. However, in excess, N and P can pose hazardous ecological effects downstream. Excessive loading of both N and P to waterways can facilitate harmful algal blooms or dead zones in reservoirs and at drainage points. Extensive research over the past half century has shown that the majority of nutrient loading to aquatic systems is the result of anthropogenic land use. While the effects of these …


Rock Magnetic Investigation Of The Michigan Basin Soils And Sediments Overlying The Oil-Bearing Silurian Pinnacle Reefs, Jake Tresnak Jan 2017

Rock Magnetic Investigation Of The Michigan Basin Soils And Sediments Overlying The Oil-Bearing Silurian Pinnacle Reefs, Jake Tresnak

Dissertations, Master's Theses and Master's Reports

A relationship between the hydrocarbon migration and magnetic properties of near-surface sediments was investigated from several hundreds of samples collected over the hydrocarbon-bearing Silurian pinnacle reef belt of the Michigan Basin. The collected samples were investigated using several rock magnetic methods and optical microscopy. The investigation has not revealed a straightforward relationship between the magnetic susceptibility and hydrocarbon reservoirs within the reef belt; both anomalously high and low susceptibility values were observed. The elevated values are associated with newly formed magnetite in the form of spheroidal grains produced by hydrocarbon-related diagenesis while the extremely low susceptibilities may reflect dissolution of …


Analysis Of Microbial Diversity In Disturbed Soil, Tyler G. Sanda Jan 2017

Analysis Of Microbial Diversity In Disturbed Soil, Tyler G. Sanda

Williams Honors College, Honors Research Projects

This paper uses the composition and abundance of microbial species to analyze soil recovery in disturbed land. Surface mining disturbs ecological communities throughout the world. As organizations seek to reclaim these disturbed lands, a proper analysis of recovery is needed. In previous studies, recovery of disturbed land was limited to surface examinations, which do not characterize the possible unseen devastating effects of the subsoil. Soil microorganisms are extremely sensitive to environmental changes such as strip mining. It is proposed that these microorganisms may serve as better indicators of recovery post disturbance. Our analysis indicates microbial recovery, however it may not …