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Articles 1 - 7 of 7
Full-Text Articles in Medicine and Health Sciences
Survey Data: Data Challenges Of Biomedical Researchers In The Age Of Omics, Rolando Garcia-Milian
Survey Data: Data Challenges Of Biomedical Researchers In The Age Of Omics, Rolando Garcia-Milian
Rolando Garcia-Milian
Survey Instrument: Data Challenges Of Biomedical Researchers In The Age Of Omics, Rolando Garcia-Milian, Denise Hersey, Milica Vukmirovic
Survey Instrument: Data Challenges Of Biomedical Researchers In The Age Of Omics, Rolando Garcia-Milian, Denise Hersey, Milica Vukmirovic
Rolando Garcia-Milian
No abstract provided.
Interview Questionaire: Data Challenges Of Biomedical Researchers In The Age Of Omics, Rolando Garcia-Milian, Denise Hersey, Milica Vukmirovic
Interview Questionaire: Data Challenges Of Biomedical Researchers In The Age Of Omics, Rolando Garcia-Milian, Denise Hersey, Milica Vukmirovic
Rolando Garcia-Milian
No abstract provided.
My Bibliography And Sciencv: Grant Reporting, Compliance And Biosketch Through Myncbi, Rolando Garcia-Milian
My Bibliography And Sciencv: Grant Reporting, Compliance And Biosketch Through Myncbi, Rolando Garcia-Milian
Rolando Garcia-Milian
Although not required at this point, the NIH suggest the use of the Science Experts Network Curriculum Vitae (SciENcv), -a MyNCBI online tool- that serves as an interagency system designed to create biosketches for multiple federal agencies. This, along with the use of My Bibliography for grant activity reporting and NIH Public Access Policy compliance, increases the importance using MyNCBI as a tool for managing NIH-sponsored research. This workshop introduce researchers, research assistants and administrators on the effective use of these online tools and will cover the following among other topics:
How to create MyNCBI account and how to link …
Introduction To Gene Enrichment Analysis Tools, Rolando Garcia-Milian
Introduction To Gene Enrichment Analysis Tools, Rolando Garcia-Milian
Rolando Garcia-Milian
Bioinformatics enrichment tools play an important role in identifying, annotating, and functionally analyzing large list of genes generated by high-throughput technologies (e.g. microarrary, RNA-seq, ChIP-chip). This workshop will provide an overview of the principle, type of enrichments, and the infrastructure of enrichment tools. By using concrete examples, it will also introduce some of the most popular tools for gene enrichment analysis such as DAVID, GSEA, and WebGestalt.
Biomart: A Research Data Management Tool For The Biomedical Sciences, Rolando Garcia-Milian
Biomart: A Research Data Management Tool For The Biomedical Sciences, Rolando Garcia-Milian
Rolando Garcia-Milian
BioMart (www.biomart.org) is a freely available open source system that allows complex queries across more than 40 different biological data sets through a single web interface. Originally developed for the Ensembl genome browser, BioMart has been integrated into widely used software such as Galaxy, BioConductor, and Cytoskape. The BioMart interface is also used by data portals such as Ensembl, Wormbase, Gramene, and Reactome. In this workshop we will use simple examples to demonstrate how to navigate, build queries, and save and export the results on BioMart such as: - how to retrieve the Ensembl mouse genes and genomic locations in …
Introduction To Genome Browsers, Rolando Garcia-Milian
Introduction To Genome Browsers, Rolando Garcia-Milian
Rolando Garcia-Milian
In this workshop we will learn how to navigate the genome browsers from NCBI's Genome Workbench, UCSC Genome Browser, and Ensembl. These browsers are valuable tools when identifying, localizing genes, and looking at their information in the genomic context. By using concrete examples, it will be shown how to locate a human gene, download a gene sequence and its upstream sequence, locate Single Nucleotide Polymorphisms (SNPs) and conserved regions, and use the browsers to download results in a batch.