Biotechnology Commons^™

Effect Of Sugars On Artemisinin Production In Artemisia Annua L.: Transcription And Metabolite Measurements, Patrick Arsenault, Daniel Vail, Kristin Wobbe, Pamela Weathers

Kristin K. Wobbe

The biosynthesis of the valuable sesquiterpene anti-malarial, artemisinin, is known to respond to exogenous sugar concentrations. Here young Artemisia annua L. seedlings (strain YU) were used to measure the transcripts of six key genes in artemisinin biosynthesis in response to growth on sucrose, glucose, or fructose. The measured genes are: from the cytosolic arm of terpene biosynthesis, 3-hydroxy-3-methyl-glutaryl-CoA reductase (HMGR), farnesyl disphosphate (FPS); from the plastid arm of terpene biosynthesis, 1-deoxyxylulose-5-phosphate synthase (DXS), 1-deoxyxylulouse 5-phosphate reductoisomerase (DXR); from the dedicated artemisinin pathway amorpha-4,11-diene synthase (ADS), and the P450, CYP71AV1 (CYP). Changes in intracellular concentrations of artemisinin (AN) and its precursors, …

U.S. Billion-Ton Update: Biomass Supply For A Bioenergy And Bioproducts Industry, Robert D. Perlack, Laurence M. Eaton, Anthony F. Turhollow Jr., Matt H. Langholtz, Craig C. Brandt, Mark E. Downing, Robin L. Graham, Lynn L. Wright, Jacob M. Kavkewitz, Anna M. Shamey, Richard G. Nelson, Bryce J. Stokes, William L. Rooney, David J. Muth Jr., J. Richard Hess, Jared M. Abodeely, Chad Hellwinckel, Danial De La Torre Ugarte, Daniel C. Yoder, James P. Lyon, Timothy G. Rials, Timothy A. Volk, Thomas S. Buchholz, Lawrence P. Abrahamson, Robert P. Anex, Thomas B. Voigt, William Berguson, Don E. Riemenschneider, Douglas Karlen, Jane M. F. Johnson, Robert B. Mitchell, Kenneth P. Vogel, Edward P. Richard Jr., John Tatarko, Larry E. Wagner, Kenneth E. Skog, Patricia K. Lebow, Dennis P. Dykstra, Marilyn A. Buford, Patrick D. Miles, D. Andrew Scott, James H. Perdue, Robert B. Rummer, Jamie Barbour, John A. Stanturf, David B. Mckeever, Ronald S. Zalesny Jr., Edmund A. Gee, P. Daniel Cassidy, David Lightle

Douglas L Karlen

The Report, Biomass as Feedstock for a Bioenergy and Bioproducts Industry: The Technical Feasibility of a Billion-Ton Annual Supply (generally referred to as the Billion-Ton Study or 2005 BTS), was an estimate of “potential” biomass within the contiguous United States based on numerous assumptions about current and future inventory and production capacity, availability, and technology. In the 2005 BTS, a strategic analysis was undertaken to determine if U.S. agriculture and forest resources have the capability to potentially produce at least one billion dry tons of biomass annually, in a sustainable manner—enough to displace approximately 30% of the country’s present petroleum …

Early Seed Development Responses In Cereals Under Environmental Stresses, Kevin Begcy

Kevin Begcy

Plants are influenced by a large number of environmental factors. The search for higher yields at lower costs requires detailed knowledge of physiology, biochemistry, molecular and genetic level of plants, in order to optimize the relationship between different factors of production for maximum performance. Reproductive development has been demonstrated to be especially highly sensitive to environmental stresses. Within environmental stresses, drought and heat stress are the major restrictors of food production worldwide. With decreasing supplies of freshwater, increase in average temperature and predictions for the increased frequency of extreme precipitation events, there is a critical need for developing crops that …

Physical, Thermal, And Spectroscopic Characterization Of Biofield Energy Treated Potato Micropropagation Medium, Mahendra Kumar Trivedi, Alice Branton, Dahryn Trivedi, Gopal Nayak, Khemraj Bairwa, Snehasis Jana

Mahendra Kumar Trivedi

Physicochemical And Spectroscopic Characterization Of Biofield Energy Treated Gerbera Multiplication Medium, Mahendra Kumar Trivedi, Alice Branton, Dahryn Trivedi, Gopal Nayak, Ragini Singh, Snehasis Jana

Mahendra Kumar Trivedi

Physicochemical Characterization Of Biofield Treated Orchid Maintenance/Replate Medium, Mahendra Kumar Trivedi, Alice Branton, Dahryn Trivedi, Gopal Nayak, Ragini Singh, Snehasis Jana

Mahendra Kumar Trivedi

Mcnamara 201412 Nih Scap Innocentive Challenge Solution - T-Bow Rainbow T-Cells And Tumor Cells Spatial Multiplexing Gene Expression Reporter System – Plus Supplement Plus Posters - 20151027 - Please Download "75" Instead, George Mcnamara

George McNamara

McNamara 201412 NIH SCAP InnoCentive Challenge Solution - T-Bow Rainbow T-cells and Tumor Cells Spatial Multiplexing Gene Expression Reporter System – plus supplement plus posters - 20151027.

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Please download the current 20151027 (October 27, 2015) Tattletales and T-Bow update from

http://works.bepress.com/gmcnamara/75/

The bepress web site is not letting me replace the old pdf here at "65" with the additional 10 pages update.

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The download is my/Cooper lab solution (submission) to the 2014 NIH Single Cell Analysis Program (SCAP) InnoCentive Challenge, "Follow That Cell". I submitted the Solution on 20141215Mon (with 20 minutes to spare). The Challenge web page …

Tattletales And T-Bow Update 20151027tue, George Mcnamara

George McNamara

20151027Tue this "75"

http://works.bepress.com/gmcnamara/75

is my update of "65" posting

See text at

http://works.bepress.com/gmcnamara/65/

for text summary. The PDf here in "75" supersedes "65".

The PDF here has 10 pages added to the end from the "65" version (pages 40-49 of PDF when including the bepress cover page)..

here is the text in my cover page (bepress may add its own cover):

20151027Tue: added 10 page e-poster at bottom explaining Binary Tattletales and T-Bow. That is, binary with respect to protein components. For one color (number of repeats, epitope tags, FPs are examples, here rounded to convenient numbers):

1. 100 …

Antibiogram, Biochemical Reactions And Genotyping Characterization Of Biofield Treated Staphylococcus Aureus, Mahendra Kumar Trivedi, Alice Branton, Dahryn Trivedi, Gopal Nayak, Sambhu Charan Mondal, Snehasis Jana

Mahendra Kumar Trivedi

Evaluation Of Effective Operational Cycle Time And Bioprocess Parameters In A Sequential Batch Reactor For Efficient Organic And Nutrient Removal From Domestic Sewage, Sandip S. Magdum, Siva Kumar Varigala, Yogesh N. Patil, Gauri P. Minde, Janardhan B. Bornare, V. Kalyanraman

Sandip S. Magdum

Anaerobic, anoxic and aerobic environment can be simulated in the single stage sequential batch reactor (SBR) . Various design conditions viz., combinations of different phase time and different cycle time, hydraulic residence time (HRT), substrate loading rate, sludge age (SRT) and aeration time were analyzed for optimum biological treatment. The pilot runs were evaluated with the design conditions of food/microbe ratio (F/M) 0.2 per day and MLSS of 4950 mg/L. For the given design conditions 4, 5 and 6 hours cycle lengths were analyzed for their efficient performance with 30-33% of decant volume for sewage containing C:N:P of 100:8:2. Studies …

Evaluation Of Phenotyping And Genotyping Characteristic Of Shigella Sonnei After Biofield Treatment, Mahendra Kumar Trivedi, Shrikant Patil, Harish Shettigar, Khemraj Bairwa, Snehasis Jana

Mahendra Kumar Trivedi

Effect Of Biofield Treatment On Phenotypic And Genotypic Characteristic Of Provindencia Rettgeri, Mahendra Kumar Trivedi, Shrikant Patil, Harish Shettigar, Khemraj Bairwa, Snehasis Jana

Mahendra Kumar Trivedi

Potential Impact Of Biofield Treatment On Atomic And Physical Characteristics Of Magnesium, Mahendra Kumar Trivedi, Rama Mohan Tallapragada, Alice Branton, Dahryn Trivedi, Gopal Nayak, Omprakash Latiyal, Snehasis Jana

Mahendra Kumar Trivedi

Biofield Treatment: A Potential Strategy For Modification Of Physical And Thermal Properties Of Indole, Mahendra Kumar Trivedi, Rama Mohan Tallapragada, Alice Branton, Dahryn Trivedi, Gopal Nayak, Rakesh K. Mishra, Snehasis Jana

Mahendra Kumar Trivedi

Impact Of Biofield Treatment On Atomic And Structural Characteristics Of Barium Titanate Powder, Mahendra Kumar Trivedi, Gopal Nayak, Shrikant Patil, Rama Mohan Tallapragada, Omprakash Latiyal, Snehasis Jana

Mahendra Kumar Trivedi

An Evaluation Of Biofield Treatment On Thermal, Physical And Structural Properties Of Cadmium Powder, Mahendra Kumar Trivedi, Gopal Nayak, Shrikant Patil, Rama Mohan Tallapragada, Omprakash Latiyal, Snehasis Jana

Mahendra Kumar Trivedi

In Vitro Evaluation Of Biofield Treatment On Cancer Biomarkers Involved In Endometrial And Prostate Cancer Cell Lines, Mahendra Kumar Trivedi, Shrikant Patil, Harish Shettigar, Mayank Gangwar, Snehasis Jana

Mahendra Kumar Trivedi

Biofield Treatment: An Alternative Approach To Combat Multidrug-Resistant Susceptibility Pattern Of Raoultella Ornithinolytica, Mahendra Kumar Trivedi, Shrikant Patil, Harish Shettigar, Mayank Gangwar, Snehasis Jana

Mahendra Kumar Trivedi

Characterization Of Physical And Structural Properties Of Brass Powder After Biofield Treatment, Mahendra Kumar Trivedi, Gopal Nayak, Rama Mohan Tallapragada, Omprakash Latiyal, Snehasis Jana

Mahendra Kumar Trivedi

Evaluation Of Biofield Modality On Viral Load Of Hepatitis B And C Viruses, Mahendra Kumar Trivedi

Mahendra Kumar Trivedi

Study background: Nowadays, hepatitis is a major challenge for clinical research, regulatory bodies, and clinicians who are trying to assess the more effectiveness of antiviral therapy against patients. Viral load count is the amount of particular viral DNA or RNA in a blood samples. It is one of the surrogate biomarker of hepatitis. High viral load indicates that the immune system is failed to fight against viruses. The aim of this study was to evaluate the impact of biofield modality on hepatitis B virus (HBV) and hepatitis C virus (HCV) in terms of viral load as surrogate marker.

Method: The …

Spectroscopic Characterization Of Chloramphenicol And Tetracycline: An Impact Of Biofield Treatment, Mahendra Kumar Trivedi

Mahendra Kumar Trivedi

Objective: Chloramphenicol and tetracycline are broad-spectrum antibiotics and widely used against variety of microbial infections. Nowadays, several microbes have acquired resistance to chloramphenicol and tetracycline. The present study was aimed to evaluate the impact of biofield treatment for spectroscopic characterization of chloramphenicol and tetracycline using FT-IR and UV-Vis spectroscopy. Methods:The study was performed in two groups (control and treatment) of each antibiotic. The control groups remained as untreated, and biofield treatment was given to treatment groups. Results: FT-IR spectrum of treated chloramphenicol exhibited the decrease in wavenumber of NO2 from 1521 cm-1 to 1512 cm-1 and increase in wavenumber of …

Influence Of Biofield Treatment On Physical, Structural And Spectral Properties Of Boron Nitride, Mahendra Kumar Trivedi

Mahendra Kumar Trivedi

Boron nitride (BN) is known for high hardness, thermal stability, thermal conductivity, and catalytic action. The aim of this study was to investigate the effect of biofield treatment on physical, structural and spectral properties of BN powder. The control and treated sample of BN powder were characterized by X-ray diffraction (XRD), surface area analysis and Fourier transform infrared spectroscopy (FT-IR). XRD results indicated that biofield treatment had substantially changed the crystallinity of BN powder as compared to control. Apart from the crystallinity, significant changes were also observed in lattice parameter, density and molecular weight of the treated BN powder as …

Thermal And Physical Properties Of Biofield Treated Bile Salt And Proteose Peptone, Mahendra Kumar Trivedi, Shrikant Patil, Rakesh K. Mishra, Snehasis Jana

Mahendra Kumar Trivedi

An Effect Of Biofield Treatment On Multidrug-Resistant Burkholderia Cepacia: A Multihost Pathogen, Mahendra Kumar Trivedi

Mahendra Kumar Trivedi

Burkholderia cepacia (B. cepacia) is an opportunistic, Gram negative pathogen which causes infection mainly in immunocompromised population and associated with high rate of morbidity and mortality in cystic fibrosis patients. Aim of the present study was to analyze the impact of biofield treatment on multidrug resistant B. cepacia. Clinical sample of B. cepacia was divided into two groups i.e. control and biofield treated. The analysis was done after 10 days of treatment and compared with control group. Control and treated group were analyzed for susceptibility pattern, MIC value, biochemical studies and biotype number using MicroScan Walk-Away® system.Sensitivity assay results showed …

Impact Of Biofield Treatment On Physical, Structural And Spectral Properties Of Antimony Sulfide, Mahendra Kumar Trivedi, Gopal Nayak, Shrikant Patil, Rama Mohan Tallapragada, Omprakash Latiyal

Mahendra Kumar Trivedi

Structural And Physical Properties Of Biofield Treated Thymol And Menthol, Mahendra Kumar Trivedi, Shrikant Patil, Rakesh K. Mishra, Snehasis Jana

Mahendra Kumar Trivedi

Novel Neuroprotective Function Of Apical-Basal Polarity Genecrumbs In Amyloid Beta 42 (Aβ42) Mediated Neurodegeneration, Andrew Steffensmeier, Meghana Tare, Oorvashi Roy Puli, Rohan Modi, Jaison Nainaparampil, Madhuri Kango-Singh, Amit Singh

Amit Singh

Alzheimer's disease (AD, OMIM: 104300), a progressive neurodegenerative disorder with no cure to date, is caused by the generation of amyloid-beta-42 (Aβ42) aggregates that trigger neuronal cell death by unknown mechanism(s). We have developed a transgenic Drosophilaeye model where misexpression of human Aβ42 results in AD-like neuropathology in the neural retina. We have identified an apical-basal polarity gene crumbs (crb) as a genetic modifier of Aβ42-mediated-neuropathology. Misexpression of Aβ42 caused upregulation of Crb expression, whereas downregulation of Crb either by RNAi or null allele approach rescued the Aβ42-mediated-neurodegeneration. Co-expression of full length Crb with Aβ42 increased severity of Aβ42-mediated-neurodegeneration, due …

Activation Of Jnk Signaling Mediates Amyloid-Ss- Dependent Cell Death, Meghana Tare, Rohan Modi, Jaison Nainaparampil, Oorvashi Roy Puli, Shimpi Bedi, Pedro Fernandez-Funez, Madhuri Kango-Singh, Amit Singh

Amit Singh

Background: Alzheimer's disease (AD) is an age related progressive neurodegenerative disorder. One of the reasons for Alzheimer's neuropathology is the generation of large aggregates of Aß42 that are toxic in nature and induce oxidative stress, aberrant signaling and many other cellular alterations that trigger neuronal cell death. However, the exact mechanisms leading to cell death are not clearly understood. Methodology/Principal Findings: We employed a Drosophila eye model of AD to study how Aß42 causes cell death. Misexpression of higher levels of Aß42 in the differentiating photoreceptors of fly retina rapidly induced aberrant cellular phenotypes and cell death. We found that …

Novel Neuroprotective Function Of Apical-Basal Polarity Genecrumbs In Amyloid Beta 42 (Aβ42) Mediated Neurodegeneration, Andrew Steffensmeier, Meghana Tare, Oorvashi Roy Puli, Rohan Modi, Jaison Nainaparampil, Madhuri Kango-Singh, Amit Singh

Madhuri Kango-Singh

Alzheimer's disease (AD, OMIM: 104300), a progressive neurodegenerative disorder with no cure to date, is caused by the generation of amyloid-beta-42 (Aβ42) aggregates that trigger neuronal cell death by unknown mechanism(s). We have developed a transgenic Drosophilaeye model where misexpression of human Aβ42 results in AD-like neuropathology in the neural retina. We have identified an apical-basal polarity gene crumbs (crb) as a genetic modifier of Aβ42-mediated-neuropathology. Misexpression of Aβ42 caused upregulation of Crb expression, whereas downregulation of Crb either by RNAi or null allele approach rescued the Aβ42-mediated-neurodegeneration. Co-expression of full length Crb with Aβ42 increased severity of Aβ42-mediated-neurodegeneration, due …

Activation Of Jnk Signaling Mediates Amyloid-Ss- Dependent Cell Death, Meghana Tare, Rohan Modi, Jaison Nainaparampil, Oorvashi Roy Puli, Shimpi Bedi, Pedro Fernandez-Funez, Madhuri Kango-Singh, Amit Singh

Madhuri Kango-Singh

Background: Alzheimer's disease (AD) is an age related progressive neurodegenerative disorder. One of the reasons for Alzheimer's neuropathology is the generation of large aggregates of Aß42 that are toxic in nature and induce oxidative stress, aberrant signaling and many other cellular alterations that trigger neuronal cell death. However, the exact mechanisms leading to cell death are not clearly understood.

Methodology/Principal Findings: We employed a Drosophila eye model of AD to study how Aß42 causes cell death. Misexpression of higher levels of Aß42 in the differentiating photoreceptors of fly retina rapidly induced aberrant cellular phenotypes and cell death. We found that …