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Full-Text Articles in Life Sciences
Multiple-Trait Gibbs Sampler For Animal Models: Flexible Programs For Bayesian And Likelihood-Based (Co)Variance Component Inference, C. P. Van Tassell, L. Dale Van Vleck
Multiple-Trait Gibbs Sampler For Animal Models: Flexible Programs For Bayesian And Likelihood-Based (Co)Variance Component Inference, C. P. Van Tassell, L. Dale Van Vleck
Department of Animal Science: Faculty Publications
A set of FORTRAN programs to implement a multiple-trait Gibbs sampling algorithm for (co)variance component inference in animal models (MTGSAM) was developed. The MTGSAM programs are available to the public. The programs support models with correlated genetic effects and arbitrary numbers of covariates, fixed effects, and independent random effects for each trait. Any combination of missing traits is allowed. The programs were used to estimate variance components for 50 replicates of simulated data. Each replicate consisted of 50 animals of each sex in each of four generations, for 400 animals in each replicate for two traits. For MTGSAM, informative prior …
Variances Of Additive And Dominance Genetic Effects For Ovulation And Twinning Rates In A Population Selected For Twinning, L. Dale Van Vleck, K. E. Gregory
Variances Of Additive And Dominance Genetic Effects For Ovulation And Twinning Rates In A Population Selected For Twinning, L. Dale Van Vleck, K. E. Gregory
Department of Animal Science: Faculty Publications
Estimates of variances due to additive and dominance genetic effects and permanent and temporary environmental effects were obtained for ovulation and twinning rates from a composite population selected for twinning rate. Measures of ovulation rate after 11 mo of age on 2,317 heifers with a total of 19,209 measures were used. Twinning measures were on 1,522 first-parity cows, 1,311 later-parity cows with a total of 3,571 measures, and 1,704 all-parity cows with 5,100 measures. Models included fixed effects of year-season-age at calving for twinning, and year-season of birth, age in months, and calendar month of measurement for ovulation rate. Four …
Microevolutionary Patterns And Molecular Markers: The Genetics Of Geographic Variation In Ascaris Suum, Steven A. Nadler
Microevolutionary Patterns And Molecular Markers: The Genetics Of Geographic Variation In Ascaris Suum, Steven A. Nadler
Harold W. Manter Laboratory of Parasitology: Faculty and Staff Publications
Molecular markers have been used only rarely to characterize the population genetic structure of nematodes. Published studies have suggested that different taxa may show distinct genetic architectures. Isoenzyme and RAPD markers have been used to investigate geographic variation of Ascaris suum at the level of infrapopulations (nematodes within individual hosts), within localities, and among geographic regions. Independent estimates of genetic differentiation among population samples based on isoenzyme and RAPD data showed similar patterns and substantial correlation. Heterozygote deficiencies within infrapopulations and large values for inbreeding coefficients among infrapopulations suggested that the composition of these populations was not consistent with a …