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Full-Text Articles in Life Sciences

Exploring Multi-Year Soybean Yield Trial Data In South Dakota Environments, Jixiang Wu, Jianli Qi, Jonathan Kleinjan Apr 2017

Exploring Multi-Year Soybean Yield Trial Data In South Dakota Environments, Jixiang Wu, Jianli Qi, Jonathan Kleinjan

Conference on Applied Statistics in Agriculture

Crop performance test (CPT) is a common practice to evaluate yield performance and adaptability of each cultivar. In this study, we combined 16 years of soybean CPT data, which included six representative locations, three major maturity groups, and over 1000 cultivars, to determine some patterns associated with yield production. As expected, the repeatability for these cultivars in trial over years was very low. Thus, the data processing in this study was focused on descriptive statistics regarding time, location, and seed supplier and several linear model analyses. The results will be presented during the conference.


Modeling Potato Psyllid Occurrence Using Sticky Trap Data For The Management Of Zebra Chip Disease, William J. Price, Erik J. Wenninger, Bahman Shafii Ph.D. Jan 2017

Modeling Potato Psyllid Occurrence Using Sticky Trap Data For The Management Of Zebra Chip Disease, William J. Price, Erik J. Wenninger, Bahman Shafii Ph.D.

Conference on Applied Statistics in Agriculture

Zebra chip disease (ZC) is a disease of potato which produces striped necrotic patterns that become pronounced when fried, making potato products such as chips and fries unmarketable. The disease is associated with a bacterium Candidatus Liberibacter solanacearum (Lso) and is transmitted by the potato psyllid, Bactericera cockerelli. An important aspect in managing this disease is the modeling and prediction of potato psyllid occurrence. In this study, potato psyllid numbers were monitored regularly across the southern Idaho region. This unique data set encompasses psyllid counts, collected by multiple sticky traps, set up at 98 growing sites over the growing …


Evaluating Adaptions Of Soft Red Winter Wheat In Eastern Region Of Usa, Dilmini Alahakoon, Anne Fennell, Jixiang Wu Jan 2017

Evaluating Adaptions Of Soft Red Winter Wheat In Eastern Region Of Usa, Dilmini Alahakoon, Anne Fennell, Jixiang Wu

Conference on Applied Statistics in Agriculture

Identification of winter wheat cultivars that are highly adapted to a wide range of environmental conditions is one of the most important wheat research objectives. Multi-environment crop trials under diverse environments is a commonly used practice to evaluate yield stability. For example, uniform eastern and southern red soft winter wheat nursery trials are conducted annually. However, locations and cultivars may vary from year to year and may cause yield stability analysis to be statistically challenging. In this study, we evaluated cultivars that were widely adapted to eastern production areas and those that were specifically adapted to other environments. We used …


Simulation Comparison Of Methods To Estimate Confidence Intervals Of The Mitigated Fraction, Kenneth W. Wakeland, Brian Fergen Jan 2017

Simulation Comparison Of Methods To Estimate Confidence Intervals Of The Mitigated Fraction, Kenneth W. Wakeland, Brian Fergen

Conference on Applied Statistics in Agriculture

In the area of veterinary medicine, efficacy studies are conducted to support licensure of vaccines. Such studies are typically designed to assess a vaccine's ability to prevent or mitigate clinical disease. For example, reduction of duration/severity of clinical signs or the severity of lung lesions are often considered as primary or secondary criteria of success. Studies designed to measure efficacy typically utilize two or more treatment groups and often use blocking structures to accommodate animal housing or litter related effects. When the criteria of interest are continuous or ordinal variables, as is the case with the above measurements, the mitigated …


Statistical Methods For Assessing Individual Oocyte Viability Through Gene Expression Profiles, Michael O. Bishop, John R. Stevens, S. Clay Isom Jan 2017

Statistical Methods For Assessing Individual Oocyte Viability Through Gene Expression Profiles, Michael O. Bishop, John R. Stevens, S. Clay Isom

Conference on Applied Statistics in Agriculture

In vivo derived oocytes are held as the gold standard for viability, other known origination methods are sub-par by comparison. Due to the low-viability of oocytes originating from these alternate methods, research was conducted to determine and quantify the validity of these alternate origination methods. However, the larger question of viability is on the individual oocyte level. We propose and compare methods of measurement based on gene expression profiles (GEPs) in order to assess oocyte viability, independent of oocyte origin. The first is based on a previously published wRMSD quantification of GEP differences. We also consider three novel methods: a …