Life Sciences Commons^™

Simulated Effects Of Varied Landscape-Scale Fuel Treatments On Carbon Dynamics And Fire Behavior In The Klamath Mountains Of California, Kevin J. Osborne

Master's Theses

I utilized forest growth model (FVS-FFE) and fire simulation software (FlamMap, Randig), integrated through GIS software (ArcMap9.3), to quantify the impacts varied landscape-scale fuel treatments have on short-term onsite carbon loss, long-term onsite carbon storage, burn probability, conditional flame length, and mean fire size. Thirteen fuel treatment scenarios were simulated on a 42,000 hectare landscape in northern California: one untreated, three proposed by the US Forest Service, and nine that were spatially-optimized and developed with the Treatment Optimization Model in FlamMap. The nine scenarios developed in FlamMap varied by treatment intensity (10%, 20%, and 30% of the landscape treated) and …

Response To Management Strategies In Young-Growth Giant Sequoia Stands At Mountain Home Demonstration State Forest – Remeasurement Twenty Years After Treatment, Joshua Soderlund

Master's Theses

There is limited information on how young-growth giant sequoia (Sequoiadendron giganteum [Lindl.] Buchholz)/mixed conifer stands respond to forest management strategies. An applied research study was initiated in 1989 when 35 approximately 0.1 acre (0.04 hectare) plots were installed in six young-growth giant sequoia/mixed conifer stands. The objective of this study was to determine if there was a difference after 20 years between treatments (a) thin only, (b) thin and prescribe burn, and (c) control in terms of the effect on overstory growth and yield, understory plants, tree regeneration and downed woody debris. Analysis of variance (ANOVA) for cubic-foot growth …

Living With Emerging Contaminants: Proteomics Of 4-Nonylphenol Exposed Arrow Goby (Clevelandia Ios), Sarah Emily Johnson

Master's Theses

Alkylphenol ethoxylates (APEs) are widely used in industrial and household products as surfactants. APEs degrade into more toxic ethoxylates, such as 4-nonylphenol (NP), which has been shown to be an endocrine disruptor and enhance the growth of tumor cells. Nonylphenol is wider spread in Pacific estuaries than originally thought. Organisms in Morro Bay, California contain some of the highest concentrations of NP reported, while containing few other contaminants. As a benthic mud-dwelling fish, the arrow goby (Clevelandia ios) may be exposed to high levels of NP due to high contaminant sequestration rates in anaerobic mud. While ecotoxicology suggests …

Impact Of Collateral Enlargement On Smooth Muscle Phenotype, Alexander Jerome Bynum

Master's Theses

Peripheral Artery Disease is a very serious disease characterized by an arterial occlusion due to atherosclerotic plaques. In response to an arterial occlusion, arteriogenesis occurs, causing smooth muscle cells to transition from a contractile to synthetic state. Also following an arterial occlusion, functional impairment was seen in the collateral circuit. An immunofluorescence protocol was developed in order to assess the impact of collateral enlargement (arteriogenesis) on smooth muscle phenotype at various time points. Smooth muscle α-actin was used to mark all smooth muscle cells, Ki-67 was used to label proliferating smooth muscle cells, and a fluorescent nuclear stain was used …

The Influence Of Chilling And Heat Accumulation On Bloom Timing, Bloom Length And Crop Yield In Almonds (Prunus Dulcis (Mill.)), Melanie M. Covert

Master's Theses

Almonds are one of the first commercial nut trees to bloom in early spring and thus are susceptible to temperature patterns prior to and during bloom which affect bloom timing, bloom length, pollination and nut set. Data used in this project include yearly dates of 90% bloom from 1996-2006, bloom length in days and final crop yields in pounds per tree for Nonpareil and Mission varieties. Data were collected from the University of California Cooperative Extension reports on the 1993-2006 Regional Almond Variety Trials in Butte, San Joaquin and Kern Counties. Temperature pattern models in the form of Chill Hours …

Factors That Relate To Overweight And Obesity In Preschool Children: An Investigation Of Preschool Children In San Luis Obispo County, Kyla Tom

Master's Theses

In the United States the trend towards overweight and obesity has been a major health concern as it has been linked to a variety of health problems. A nation-wide initiative, “Let’s Move” created by Michelle Obama was launched in February 2010 with the goal that, in one generation; every child born will be at a healthy weight at the start of adulthood. Healthy People 2020 are national health objectives for the United States to obtain by 2020. In 2009, San Luis Obispo (SLO) County preschool children overweight and obesity rates mirrored national rates of 1 in 5 four-year-old children were …

Investigating The Roles Of Ndj1 And Tid1 In Crossover Assurance In Saccharomyces Cerevisiae, Rianna Knowles

Master's Theses

Meiosis is the specialized process of cell division utilized during gametogenesis in all sexually reproducing eukaryotes, which consists of one round of DNA replication followed by two rounds of chromosome segregation and results in four haploid cells. Crossovers between homologous chromosomes promote proper alignment and segregation of chromosomes during meiosis.

Crossover interference is a genetic phenomenon in which crossovers are non-randomly placed along chromosomes. Crossover assurance ensures that every homologous chromosome pair obtains at least one crossover during Prophase I. Crossovers physically connect homologous pairs, allowing spindle fibers to attach and separate homologs properly. However, some organisms have shown an …

Classifying And Mapping Diversity In A Species-Poor System: The Mangrove Meta-Community Of Laguna Chacahua National Park, Oaxaca, Mexico, Elizabeth Kay Weisgerber

Master's Theses

ABSTRACT

Classifying and Mapping Diversity in a Species-Poor System: the mangrove meta-community of Laguna Chacahua National Park, Oaxaca, Mexico

by

Elizabeth Kay Weisgerber

Both field transects and imagery grid plots were analyzed with the goal of creating a community classification map for the mangrove forest of Parque Nacional Lagunas de Chacahua. In total, data was collected in 49 sites throughout the park, recording measures such as DBH, basal area, estimated dominance, frequency, cover and relative dominance. Field locations were marked and georeferenced with a GPS and grid plots overlaid on satellite imagery of the park were generated via a random …

Influence Of Vineyard Floor Management Practices On Soil Aggregate Stability, Total Soil Carbon And Grapevine Yield, Kimberly Ellen Adams

Master's Theses

Soil aggregates provide pore spaces of various sizes supplying water, gases and nutrients to plant roots and microorganisms, and facilitate moisture retention and availability. Soil aggregate stability is indicative of soil biological and structural health, and is increased by soil carbon derived from plant roots and the soil microbial biomass. Aggregate stability and soil carbon can be enhanced by increasing organic matter through compost additions or by planting cover crops. Additionally, aggregate stability is enhanced by arbuscular mycorrhizal fungi (AMF) that form a symbiotic association with plant roots, and consolidate soil particles into aggregates through hyphal networks and through the …

Effects Of Chainring Design On Performance In Competitive Cyclists, Christiane Rose O'Hara

Master's Theses

The development of noncircular chainrings to improve cycling performance has been in progress since the 1980’s and continues apace. The aim of this study was to compare performance time and physiological responses in cycling using a standard circular chainring versus a noncircular chainring developed in 2005: the Rotor Q-Ring. Eight competitive male cyclists were pre-tested using the original circular chainrings and also on the initial week of testing. The intervention consisted of cycling with Rotor Q-Rings for four weeks. Post-testing occurred with the original chainrings for the final week of testing. Testing consisted of a maximal or submaximal graded exercise …

An Exploratory Biomechanical Analysis Of The Side-To-Side Swing Patterns Of Three Skilled Switch Hitters, Francesca Marie Castellucci

Master's Theses

The ability to successfully switch hit, or hit a baseball from both sides of the plate, requires a great amount of practice and coordination bilaterally. This study used three-dimensional kinematic and kinetic data to examine the swing patterns of skilled switch hitters in baseball. Three male minor league and division I collegiate switch hitters participated. Subjects stood on force plates and hit baseballs off a tee while their swings were recorded with a three-dimensional optical motion capture system. Each subject performed twenty total swings, ten from the right and ten from the left. The swings were digitally analyzed and the …

Evaluation Of Vacuum Packaging On The Physical Properties, Solubility, And Storage Space Of Dairy Powders, Hadi Eshpari

Master's Theses

As many of the dairy powders manufactured have to travel long distances to reach their customers, both domestically and internationally, there is considerable interest among dairy powder manufacturers to maintain the quality of their products for relatively long storage periods. Dairy powders can have a long shelf life if packaged and stored properly. Vacuum packaging can be an attractive packaging strategy to maintain the quality of dairy powders and provide added value by improving the efficiency of using the storage space; because of the inherent compactness of these products. Vacuum packaged dry dairy ingredients may also have added ease of …

Effects Of Milk Processing On The Milk Fat Globule Membrane Constituents, Xiomara E. Elías-Argote

Master's Theses

ABSTRACT

Effects of Milk Processing on the Milk Fat Globule Membrane Constituents

Xiomara E. Elías-Argote

The milk fat globule membrane (MFGM) is avidly studied by many groups of scientists around the world due to its unprecedented nutritional and functional properties; however, limited research has been performed on the effects of milk processing on the chemical changes of the MFGM. Thus, this study highlights the changes that lipids and proteins undergo from the time milk leaves cow’s udders. Cooling (4 °C) was included along with subsequent pasteurization by different traditional thermal processes and cold pasteurization by pulse light ultra violet treatment. …

Predicting Soil Erosion In The Santa Rosa Creek Watershed Using Rusle2 And Geographic Information Systems, Stacey Carol Smith

Master's Theses

The Santa Rosa Creek watershed is one of the most pristine watersheds on California’s Central Coast. Preserving this watershed is of great interest because it provides rich soils for agriculture, vast rangelands for cattle, and flowing streams for federally threatened species such as steelhead trout. Soil erosion could impact these resources. Using prediction tools, it is possible to study the erosion that could be occurring in a watershed and identify locations which could contribute the highest amounts of sediment. The objectives of this study were to use RUSLE2 and Geographic Information Systems (GIS) to predict soil erosion rates for each …

Isolation Of Antifungal Lactic Acid Bacteria From Food Sources And Their Use To Inhibit Mold Growth In Cheese, Dan Zhao

Master's Theses

A large amount of cheese is lost every year due to mold contamination. Biopreservation, which is the use of biological entities (microbes) and their metabolites to suppress microbial spoilage instead of chemical preservatives has lately gained increasing interest. Lactic acid bacteria (LAB) have the potential for use in biopreservation, because they are safe to consume and naturally exist in many foods. In this study, fifteen strains of lactobacilli isolated from dairy products, vegetables, and fermented pickles were tested by agar overlay assay for their anti-mold activity. Six strains grown on MRS agar showed strong inhibitory activity against a target mold …

The Effect Of Processing Parameters And Methylcellulose On Texture And Consumer Acceptability Of A Non-Melting Dairy Protein Gel, Joshua Goldman

Master's Theses

The overall goal was to understand the capabilities of a dairy based meat alternative. This was done in three phases: 1) the production of a dairy protein gel as a base for a dairy based meat alternative, 2) texturization of the dairy protein gel base to produce a nugget like texture, and 3) a consumer test to determine the acceptability of the dairy based nugget compared to meat and meat alternatives on the market.

For phase I, a dairy protein gel base was tested to understand the textural attributes. Milk to whey percentages and level of acidification were examined to …

Hydrologic Alteration And Sedimentation In The Upper Henry's Fork Watershed, Amelie Jeanne Charnaux

Master's Theses

Abstract

Hydrologic Alteration and Sedimentation in the Upper Henry’s Fork Watershed

Amelie Jeanne Charnaux

The Henry’s Fork of the Snake River is venerated by the global recreational community as one of the finest trout fishing streams on the planet. Furthermore, this remarkable waterway flows within the bounds of one of the most important ecological corridors in the equally world-renowned Greater Yellowstone Ecosystem. While the recreational and biological features of this corner of Idaho may capture the interest of the broader public, the waterway is equally significant to the livelihoods of local interests, such as the ranching and farming communities. With …

Evaluation Of Drip Applications And Foliar Sprays Of The Biocontrol Product Actinovate On Powdery Mildew And Other Fungal Diseases Of Tomato, Therese Angelica Quintana-Jones

Master's Theses

The effectiveness of the biocontrol product Actinovate^® at enhancing tomato plant growth and yield, and reducing the presence of fungal pathogens was studied in greenhouse and field conditions. In the greenhouse, no differences were found among seed germination or plant survival rates, seedling heights, dry root weights, and dry shoot weights of tomato seedlings grown from seeds drenched with Actinovate^® or Rootshield^®. The effects of one initial Actinovate^® seed drench at sowing, repeated applications through the drip irrigation throughout the season, or repeated applications through the drip irrigation plus foliar applications throughout the season at …

Molecular Analysis Reveals Unique Microbiome In Ileal Pouch During Pouchitis Compared To Healthy Pouches In Ulcerative Colitis And Familial Adenomatous Polyposis, Tiffany Wallingford Glavan

Master's Theses

In severe cases of ulcerative colitis (UC) unresponsive to current treatment options, patients require a complete proctocolectomy, or surgical removal of the colon. Ileal pouch anal anastomosis (IPAA) has become the preferred surgical technique for patients who require surgery, as this method restores rectal function. This procedure is also used to treat colorectal cancers such as adenocarcinoma and familial adenomatous polyposis (FAP). The surgery involves an abdominal colectomy with the construction of an ileal pouch created from folded tissue recovered from the ileal portion of the small intestine. Up to 50% of patients who require IPAA surgery experience an episode …

Optimizing Micronutrient Intake Of Lactating Women In Kwazulu-Natal, South Africa, Through Increased Wild Edible Plant Consumption, Kerry Pearson

Master's Theses

OPTIMIZING MICRONUTRIENT INTAKE OF LACTATING WOMEN IN KWAZULU-NATAL, SOUTH AFRICA, THROUGH INCREASED WILD EDIBLE PLANT CONSUMPTION

Kerry Pearson

Micronutrient consumption in KwaZulu-Natal, South Africa, is insufficient to meet the needs of lactating women. Inadequate intake negatively impacts the health of both the mother and infant. Increasing consumption of wild edible plants has been recommended to combat these deficiencies, but information has not yet been provided on which types of wild plants should be eaten or in what quantity. The objective of this study was to determine the optimal mixture of wild edible plants that needs to be consumed to meet …

Ischemia Impairs Vasodilation In Skeletal Muscle Resistance Artery, Kyle Remington Struthers

Master's Theses

Functional vasodilation in arterioles is impaired with chronic ischemia. We sought to examine the impact of chronic ischemia and age on skeletal muscle resistance artery function. To examine the impact of chronic ischemia, the femoral artery was resected from young (2-3mo) and adult (6-7mo) mice and the profunda femoris artery diameter was measured at rest and following gracilis muscle contraction 14 days later using intravital microscopy. Functional vasodilation was significantly impaired in ischemic mice (14.4±4.6% vs. 137.8±14.3%, p<0.0001 n=8) and non-ischemic adult mice (103.0±9.4% vs. 137.8±14.3%, p=0.05 n=10). In order to analyze the cellular mechanisms of the impairment, a protocol was developed to apply pharmacological agents to the experimental preparation while maintaining tissue homeostasis. Endothelial and smooth muscle dependent vasodilation were impaired with ischemia, 39.6 ± 13.6% vs. 80.5 ± 11.4% and 43.0 ± 11.7% vs. 85.1 ± 10.5%, respectively. From this data, it can be supported that smooth muscle dysfunction is the reason for the observed impairment in arterial vasodilation.

Harmful Algal Bloom (Hab) Communities And Co-Occurring Species In Relation To Near Shore Ocean Dynamics In San Luis Bay, California, Samuel Christopher Rankin

Master's Theses

The occurrence of phytoplankton taxa, with special focus on harmful algal bloom (HAB) taxa, was monitored for one year off the central coast of California to examine both their co-occurrence and physical and chemical variables influencing their temporal patterns. Bi-weekly samples were taken from October 6, 2008 to October 5, 2009 in San Luis Obispo Bay, CA. Canonical correspondence analysis (CCA) of weekly samples indicated that 46.1% of the variability in species abundance was explained by the variables in the model, higher than previous reports. Cluster analysis divided phytoplankton communities into HAB and non-HAB groups of species, while shared distribution …

Studying Milk Coagulation Kinetics With Laser Scanning Confocal Microscopy, Image Processing, And Computational Modeling, Richard Joseph Hennessy

Master's Theses

The kinetics of milk coagulation are complex and still not well understood. A deeper understanding of coagulation and the impact of the relevant factors would aid in both cheese manufacturing and also in determining the nutritional benefits of dairy products. A method using confocal microscopy was developed to follow the movement of milk fat globules and the formation of a milk protein network during the enzyme-induced coagulation of milk. Image processing methods were then used to quantify the rate of coagulation. It was found that the texture of the protein network is an indicator of the current status of the …

A Novel Exercise Device For Users In Wheelchairs: A Study Of Abdominal Muscle Activation, Rebecca Jo Campbell

Master's Theses

This study evaluates the use of a wheelchair balance board. The balance board was created as a sensory stimulation tool for users with various disabilities. It was originally designed to create vestibular stimulation for the person after they were loaded on. This study was used as a way to test if the balance board could be used for other things such as physical therapy and exercise. Ten able-bodied individuals were used to show the functionality of the device. They were asked to perform six different abdominal exercises while the muscle activity of their rectus abdominis and external obliques was measured …

Impact Of Exercise On Brain Responses To Visual Food Cues: An Fmri Study, Nero Erezi Evero

Master's Theses

On the basis of a strong body of data, the Institute of Medicine currently recommends at least 60 minutes of exercise per day to prevent body weight gain overtime. Previous studies have shown that there is no compensatory increase in food intake with this dose of exercise. Ultimately, the brain decides whether to alter food intake. Surprisingly, no published studies have assessed the impact of exercise on brain activation. Using functional magnetic resonance imaging (fMRI) and an appetite questionnaire, we investigated the effects of a single bout of aerobic exercise on brain responses to visual food cues and subjective appetite …

The Ma-10 Cell Line As A Model Of Insl3 Regulation And Leydig Cell Function, Mary E. Strong

Master's Theses

Leydig cells produce testosterone in response to luteinizing hormone (LH) via the cyclic adenosine monophosphate (cAMP)/protein kinase A pathway. Additionally, these cells are responsible for producing insulin-like peptide 3 (INSL3), a peptide hormone that is essential for testicular descent. The insl3 promoter in Leydig cells can be activated by cAMP through the transcription factor Nur77, which has also been shown to regulate the promoters of the steroidogenic enzymes, cyp17 and 3b-hsd. While the mechanism of LH action on testosterone production is well characterized, the effect of LH on insl3 abundance has yet to be shown directly. The MA-10 …

Nitric Oxide Synthesis By Chicken Macrophages Results In Coordinated Changes Of Multiple Arginine Transporters, Michael Moulds

Master's Theses

Arginine transport is primarily mediated by the cationic amino acid transporters (CATs) in mammalian cells, but in aves the y⁺, b^0,+ and B^0,+ transport systems have also been observed. Arginine is the limiting catabolic substrate required for the production of nitric oxide (NO), a highly reactive compound that acts as a signaling molecule or killing compound. NO is synthesized by inducible nitric oxide synthase (iNOS) by macrophages for pathogen clearance. In mammals, CAT-2B is responsible for ARG import in the macrophage for NO synthesis, but the chicken CAT-2B isoform does not transport ARG. Therefore the objective …

Combining Conventional Tests And Terminal Restriction Fragment Analysis To Evaluate Microbial Quality Of Raw Milk, Haibin Guo

Master's Theses

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Abstract

Combining Conventional Tests and Terminal Restriction Fragment Analysis to Evaluate Microbial Quality of Raw Milk

Haibin Guo

The dairy industry is an important part in the domestic economy in the U.S. and the quality of dairy products hinges on raw milk quality. Microorganisms play a critical role in raw milk quality and they are currently tested and monitored by conventional microbiological tests. …

Effects Of Wildland-Urban Interface Fuel Treatments On Potential Fire Behavior And Ecosystem Services In The Central Sierra Nevada Mountains Of California, Christopher C. Hamma

Master's Theses

ABSTRACT

EFFECTS OF WILDLAND-URBAN INTERFACE FUEL TREATMENTS ON POTENTIAL FIRE BEHAVIOR AND ECOSYSTEM SERVICES IN THE CENTRAL SIERRA NEVADA MOUNTAINS OF CALIFORNIA

Christopher C. Hamma

For the past several decades, the wildland-urban interface (WUI) has been expanding in the low- to mid-elevation mixed-conifer belt of California’s Sierra Nevada mountain range. Concurrently, the effects of fire exclusion and shifting climatic patterns in this region have led to increases in wildfire size and severity, posing an ever-greater risk to life and property. As a result, the need for implementation of fuel treatments to reduce fire hazard is generally recognized to be urgent. …

The Development Of A Novel Technique To Evaluate Binding Between Probiotic Bacteria And Phospholipids, And The Creation Of A Dairy-Based Food Product Rich In Milk Bioactives, Megan Ann Cleveland

Master's Theses

Probiotic bacteria are increasingly prevalent in food and nutritional products today. These remarkable microorganisms are capable of imparting exceptional health benefits on their host, including prevention of infection by pathogens and stimulation of immune system function. Their most common mode of delivery is through dairy products (e.g. yogurt), which are also one of their preferred habitats. The interactions between probiotic bacteria and dairy systems have been studied, but are still not well discerned. There is a need for better understanding of these associations, as well as those surrounding the mode of bacterial transfer from the food product to the human …