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University of Texas Rio Grande Valley

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NrDNA

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Nuclear And Chloroplast Dnas Reveal Diverse Origins And Mis-Identifications Of Juniperus Cultivars From Windsor Gardens, Uk, Part 3 Of 3, Robert P. Adams, Sam T. Johnson, John Anderson, Keith Rushforth, Nicolas Valentin, Andrea E. Schwarzbach, Sonja Siljak-Yakovlev Sep 2020

Nuclear And Chloroplast Dnas Reveal Diverse Origins And Mis-Identifications Of Juniperus Cultivars From Windsor Gardens, Uk, Part 3 Of 3, Robert P. Adams, Sam T. Johnson, John Anderson, Keith Rushforth, Nicolas Valentin, Andrea E. Schwarzbach, Sonja Siljak-Yakovlev

Health & Biomedical Sciences Faculty Publications and Presentations

Ploidy was determined for 15 plants labeled as Juniperus squamata at the Windsor Gardens, UK and revealed 12 were tetraploids (2n=4x=44) and 3 were diploids (2n=2x=22). nrDNA (ITS) and cp DNA sequencing the tetraploids found: 4 J. squamata (4x); 4 J. tibetica (4x) x J. squamata (4x); 2 J. sabina var. balkanensis (4x) x J. squamata (4x); and one J. chinensis var. sargentii (4x) x J. squamata (4x). Sequencing the 3 diploids revealed: 2 J. pingii (2x) x J. pingii (2x); and 1 J. pingii (2x)? x J. komarovii(2x)? Ploidy analyses of 18 additional cultivars, putatively from Juniperus davurica, J. …


Discovery Of Juniperus Sabina Var. Balkanensis R. P. Adams And A. N. Tashev In Macedonia, Bosnia-Herzegovina, Croatia And Central And Southern Italy And Relictual Polymorphisms Found In Nrdna, Robert P. Adams, Adam Boratynski, Katarzyna Marcysiak, Francesco Roma-Marzio, Lorenzo Peruzzi, Fabrizio Bartolucci, Fabio Conti, Tuğrul Mataraci, Andrea E. Schwarzbach, Alexander N. Tashev, Sonja Siljak-Yakovlev Jun 2018

Discovery Of Juniperus Sabina Var. Balkanensis R. P. Adams And A. N. Tashev In Macedonia, Bosnia-Herzegovina, Croatia And Central And Southern Italy And Relictual Polymorphisms Found In Nrdna, Robert P. Adams, Adam Boratynski, Katarzyna Marcysiak, Francesco Roma-Marzio, Lorenzo Peruzzi, Fabrizio Bartolucci, Fabio Conti, Tuğrul Mataraci, Andrea E. Schwarzbach, Alexander N. Tashev, Sonja Siljak-Yakovlev

Health & Biomedical Sciences Faculty Publications and Presentations

Additional analyses of trnS-trnG and nrDNA from specimens from Bosnia-Herzegovina, southern and central, Italy, Croatia and Macedonia revealed the presence of J. sabina var. balkanensis in these areas west of the previously known populations in Greece, Bulgaria and western Turkey. Careful chromatogram analysis of eight (8) polymorphic sites in nrDNA revealed that nearly all of the populations of both var. balkanensis and var. sabina contained from 2 to 8 polymorphic sites. For these 8 heterozygous sites, two exclusive patterns were found in J. sabina. One type (GGACCCAG) was found in 16/62 plants and type 2 (ACGACAGT) was found in 4/62 …


The Juniperus Flaccida-J. Poblana Complex Revisited: Insights From Molecular And Oil Analysis, Robert P. Adams, M. Socorro González-Elizondo, Martha González-Elizondo, Andrea E. Schwarzbach Mar 2018

The Juniperus Flaccida-J. Poblana Complex Revisited: Insights From Molecular And Oil Analysis, Robert P. Adams, M. Socorro González-Elizondo, Martha González-Elizondo, Andrea E. Schwarzbach

Health & Biomedical Sciences Faculty Publications and Presentations

Analysis of nrDNA, petN-psbM, trnS-trnG, trnD-trnT, and trnF-trnL revealed that J. flaccida is diverse, but quite separated from J. poblana and J. aff. poblana from Nayarit by at least 10 Mutational events (MEs, SNPs + indels), and is actually a bit closer to J. standleyi (8 MEs). A divergent J. poblana from Oaxaca is merely 2 MEs distant from the Nayarit trees. The J. poblana samples from the type locality (Amozoc, Pue.) vary by only 1 ME among samples. Leaf oils, on the other hand, show to the Nayarit juniper quite differentiated from other J. poblana. In addition, the habit …


Geographic Variation In Juniperus Drupacea: Dna Sequencing And Volatile Leaf Oils: Further Evidence Of Putative Pleistocene Genetic Isolation Between Europe And Asia, Robert P. Adams, Adam Boratynski, Magda Dou Dagher-Kharrat, Hagar V. Leschner, Tuğrul Mataraci, Andrea E. Schwarzbach Dec 2017

Geographic Variation In Juniperus Drupacea: Dna Sequencing And Volatile Leaf Oils: Further Evidence Of Putative Pleistocene Genetic Isolation Between Europe And Asia, Robert P. Adams, Adam Boratynski, Magda Dou Dagher-Kharrat, Hagar V. Leschner, Tuğrul Mataraci, Andrea E. Schwarzbach

Health & Biomedical Sciences Faculty Publications and Presentations

Recently, Sobierajska et al. (2016), using nSSR and morphology, showed that Juniperus drupacea exhibited differentiation between Greece and Turkey/ Lebanon, suggestive of Pleistocene genetic isolation. Here, we report that leaf terpenoids and DNA sequence data support their hypothesis by confirming differentiation between Greece and Turkey/ Lebanon/ Israel. The leaf oils of the Turkey/ Lebanon plants contained one unique terpene (trans-verbenol, 0.1-1.4%) that was absent in the Greece plants. The Greece oil contained three terpenes not found in the Lebanon/ Turkey plants: (ar)-curcumene (2.2%), β-alaskene (0.3%) and α-alaskene (0.4%). Four other terpenes were in higher concentration in the Greece oils: camphene …


Discovery Of Juniperus Sabina Var. Balkanensis R. P. Adams And A. N. Tashev In Western Turkey (Anatolia), Robert P. Adams, Adam Boratynski, Tuğrul Mataraci, Alexander N. Tashev, Andrea E. Schwarzbach Jan 2017

Discovery Of Juniperus Sabina Var. Balkanensis R. P. Adams And A. N. Tashev In Western Turkey (Anatolia), Robert P. Adams, Adam Boratynski, Tuğrul Mataraci, Alexander N. Tashev, Andrea E. Schwarzbach

Health & Biomedical Sciences Faculty Publications and Presentations

Additional analyses of trnS-trnG and nrDNA from herbarium specimens from Europe revealed the presence of J. sabina var. balkanensis in western Turkey near Izmir and expands the range previously known only from Bulgaria and adjacent mountains in Greece. A more detailed map of the taxon's distribution is presented.


Evidence Of Relictual Introgression Or Incomplete Lineage Sorting In Nrdna Of Juniperus Excelsa And J. Polycarpos In Asia Minor, Robert P. Adams, Metin Armagan, Adam Boratynski, Bouchra Douaihy, Magda Dou Dagher-Kharrat, Vahid Farzaliyev, Salih Gucel, Tuğrul Mataraci, Andrea E. Schwarzbach Apr 2016

Evidence Of Relictual Introgression Or Incomplete Lineage Sorting In Nrdna Of Juniperus Excelsa And J. Polycarpos In Asia Minor, Robert P. Adams, Metin Armagan, Adam Boratynski, Bouchra Douaihy, Magda Dou Dagher-Kharrat, Vahid Farzaliyev, Salih Gucel, Tuğrul Mataraci, Andrea E. Schwarzbach

Health & Biomedical Sciences Faculty Publications and Presentations

DNA analysis of Juniperus excelsa from throughout its range revealed that J. polycarpos, instead of J. excelsa occupies central and eastern Turkey. Based on nrDNA (ITS) data, it appears that relictual hybridization has occurred in southeastern Turkey between J. polycarpos and J. turcomanica. Surprisingly, evidence of incomplete lineage sorting or relictual hybridization between J. polycarpos and J. seravschanica was found in central Turkey and northwest Iran.


Chloroplast Capture In Juniperus Sabina Var. Balkanensis R. P. Adams And A. N. Tashev, From The Balkan Peninsula: A New Variety With A History Of Hybridization With J. Thurifera, Robert P. Adams, Andrea E. Schwarzbach, Alexander N. Tashev Apr 2016

Chloroplast Capture In Juniperus Sabina Var. Balkanensis R. P. Adams And A. N. Tashev, From The Balkan Peninsula: A New Variety With A History Of Hybridization With J. Thurifera, Robert P. Adams, Andrea E. Schwarzbach, Alexander N. Tashev

Health & Biomedical Sciences Faculty Publications and Presentations

example of chloroplast capture has been identified in Juniperus sabina from Bulgaria and Greece in the Balkan peninsula. Nuclear DNA and overall morphology clearly indicate a close relationship to Juniperus sabina, whereas the cpDNA from these populations is very uniform and is nearly identical to that of J. thurifera, an unrelated species currently growing in France, Spain and Morocco. The new taxon is recognized as Juniperus sabina var. balkanensis R. P. Adams and A. Tashev. At present, this new variety is known only from locations in Bulgaria and Greece.


Chloroplast Capture By A New Variety, Juniperus Sabina Var. Balkanensis R. P. Adams And A. N. Tashev, From The Balkan Peninsula: A Putative Stabilized Relictual Hybrid Between J. Sabina And Ancestral J. Thurifera, Robert P. Adams, Andrea E. Schwarzbach, Alexander N. Tashev Apr 2016

Chloroplast Capture By A New Variety, Juniperus Sabina Var. Balkanensis R. P. Adams And A. N. Tashev, From The Balkan Peninsula: A Putative Stabilized Relictual Hybrid Between J. Sabina And Ancestral J. Thurifera, Robert P. Adams, Andrea E. Schwarzbach, Alexander N. Tashev

Health & Biomedical Sciences Faculty Publications and Presentations

An example of chloroplast capture has been found in Juniperus sabina from Bulgaria and Greece in the Balkan peninsula. The cpDNA from these populations is very uniform and is nearly identical to that of J. thurifera (currently growing in France, Spain and Morocco). The new taxon is recognized as Juniperus sabina var. balkanensis R. P. Adams and A. Tashev. At present, the variety, with the thurifera cpDNA, is known only from Bulgaria and Greece.


Geographic Variation In Nrdna And Four Cpdna Regions Of Juniperus Excelsa: Analysis Of New Records From Bulgaria, Cyprus And Southwestern Turkey, Robert P. Adams, Salih Gucel, Tuğrul Mataraci, Alexander N. Tashev, Bouchra Douaihy, Magda Dou Dagher-Kharrat, Vahid Farzaliyev, Andrea E. Schwarzbach Jan 2016

Geographic Variation In Nrdna And Four Cpdna Regions Of Juniperus Excelsa: Analysis Of New Records From Bulgaria, Cyprus And Southwestern Turkey, Robert P. Adams, Salih Gucel, Tuğrul Mataraci, Alexander N. Tashev, Bouchra Douaihy, Magda Dou Dagher-Kharrat, Vahid Farzaliyev, Andrea E. Schwarzbach

Health & Biomedical Sciences Faculty Publications and Presentations

Sequencing of nrDNA, plus four cp DNA regions: petN-psbM, trnS-trnG, trnD-trnT and trnL-trnF of newly acquired samples of J. excelsa from Bulgaria, Cyprus and Turkey showed little variation in J. excelsa (sensu stricto), except for the unusual situation in Lebanon, where J. excelsa and J. polycarpos (and likely J. p. var. turcomanica) grow near each other and may be hybridizing. The genetic composition of the eastern-most populations of J. excelsa in Turkey is unknown and deserves further study.


Juniperus Communis In Morocco: Analyses Of Nrdna And Cpdna Regions, Robert P. Adams, Mustapha Rhanem, Andrea E. Schwarzbach Apr 2015

Juniperus Communis In Morocco: Analyses Of Nrdna And Cpdna Regions, Robert P. Adams, Mustapha Rhanem, Andrea E. Schwarzbach

Health & Biomedical Sciences Faculty Publications and Presentations

Juniperus communis from Morocco was analyzed by DNA sequence data from nrDNA plus four cp DNA regions (4315 bp) and found to be in a clade with other J. communis from Europe. The sub-alpine, prostrate J. communis plants of Morocco, each only contained a single SNP and a one bp indel (deletion) in the trnSG sequence data for a total of 2 MEs (mutation events). The Moroccan prostrate J. communis appear to be a variant of J. communis of Europe and central Asia and not part of the var. hemispherica group.


Juniperus Communis In Azerbaijan: Analyses Of Nrdna And Cpdna Regions, Robert P. Adams, Vahid Farzaliyev, Alexander N. Tashev, Andrea E. Schwarzbach Jan 2015

Juniperus Communis In Azerbaijan: Analyses Of Nrdna And Cpdna Regions, Robert P. Adams, Vahid Farzaliyev, Alexander N. Tashev, Andrea E. Schwarzbach

Health & Biomedical Sciences Faculty Publications and Presentations

Juniperus 'pygmaea' from Azerbaijan was analyzed by DNA sequence data from nrDNA plus four cp DNA regions (4315 bp) and found in a clade with J. communis 'oblonga' (= J. communis) Armenia, not with J. c. forma pygmaea of Bulgaria. It seems prudent to not recognize this variant taxonomically but treat it as J. communis.