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Articles 1 - 17 of 17
Full-Text Articles in Life Sciences
Gulf Sturgeon (Acipenser Oxyrinchus Desotoi) Pre-Restoration Occupancy Patterns On Ship Island, Mississippi Sound With An Evaluation Of Designated Critical Habitat Use By Eastern And Western Population Segments, Page Elizabeth Vick
Master's Theses
Critical spawning and feeding habitat was designated for federally threatened, anadromous Gulf Sturgeon (GS) to aid in population recovery. This study examined GS occupancy, habitat use, and movement through critical habitat monitored by the Ship Island (SI) acoustic array during overwintering periods from 2011 to 2015 prior to MsCIP SI restoration. An occupancy index analyzed patterns of spatial and temporal habitat use of both western and eastern population segments (WPS and EPS, respectively) of GS on the SI array. The ends of SI along with the passes and cuts of the island, especially Dog Keys Pass (DKP), were occupied by …
The Elasmobranch-Microbe Relationship: Trimethylamine N-Oxide Synthesis, Urea Hydrolysis, And Microbe-Osmolyte Interactions In The Atlantic Stingray, Dasyatis Sabina, Kaitlin Kelly Doucette
The Elasmobranch-Microbe Relationship: Trimethylamine N-Oxide Synthesis, Urea Hydrolysis, And Microbe-Osmolyte Interactions In The Atlantic Stingray, Dasyatis Sabina, Kaitlin Kelly Doucette
Master's Theses
The elasmobranch osmoregulatory strategy is predicated on the accumulation of nitrogenous compounds, primarily urea and trimethylamine n¬-oxide (TMAO). Despite the abundance of these plasma osmolytes, it is notable that elasmobranchs appear to lack urease and TMA oxidase (Tmase), enzymes that scavenge urea-nitrogen and synthesize TMAO, respectively. However, urease and Tmase are found in many species of bacteria. Therefore, I hypothesized that intestinal bacteria are responsible for urease and Tmase activity in elasmobranchs. Absent dietary nitrogen sources, I evaluated the effects of reduced intestinal microbiota on osmoregulation in Atlantic stingray (Dasyatis sabina) in vivo. D. sabina were given …
Modern Fair-Weather And Storm Sediment Transport Around Ship Island, Mississippi: Implications For Coastal Habitats And Restoration Efforts, Eve Rettew Eisemann
Modern Fair-Weather And Storm Sediment Transport Around Ship Island, Mississippi: Implications For Coastal Habitats And Restoration Efforts, Eve Rettew Eisemann
Master's Theses
The Mississippi – Alabama barrier island chain is experiencing accelerated sea level rise, decreased sediment supply, and frequent hurricane impacts. These three factors drive unprecedented rates of morphology change and ecosystem reduction. All islands in the chain have experienced land loss on the order of hectares per year since records began in the 1840s. In 1969, Hurricane Camille impacted as a Category 5, breaching Ship Island, and significantly reduced viable seagrass habitat. Hurricane Katrina impacted as a Category 3 in 2005, further widening Camille Cut. To better understand the sustainability of these important islands and the ecosystems they support, sediment …
Fecal Bacterial Communities As An Indicator Of Trophic Interactions Among Anuran Larvae, Steven Jacob Everman
Fecal Bacterial Communities As An Indicator Of Trophic Interactions Among Anuran Larvae, Steven Jacob Everman
Master's Theses
Anurans are mass spawners, often with multiple females spawning together, resulting in thousands of tadpoles sharing a habitat. Such large numbers of tadpoles with limited dispersal can lead to intense competition for resources. Inter and intra-specific competition for food could have negative impacts on the growth and survival of smaller tadpoles. Fecal bacterial communities have the potential to be used as indicators of changes in diet making it possible to determine if tadpoles in the wild are eating the same food or not. After feeding on two prepared diets that differed in the percentage of complex carbohydrates, the fecal bacterial …
Bloom Or Bust: Retrospective Analysis Of The Giant Jellyfish, Nemopilema Nomurai (Scyphozoa: Rhizostomeae), Ecology In The East Asian Marginal Seas, Naomi Yoder
Master's Theses
The Giant Jellyfish, Nemopilema nomurai, is a large-bodied bloom-forming jellyfish that occurs in the semi-enclosed basins of the East Asian Marginal Seas. N. nomurai has bloomed more frequently in the past 20 years than in any period previously recorded. In Japan, recent N. nomurai blooms were responsible for millions of dollars in lost revenue and equipment damage to commercial fisheries alone. This study statistically analyzed 21 environmental factors in connection with N. nomurai occurrence (using occurrence as a proxy for blooms). Eight factors resulted in a statistically significant or marginally significant (p ≤ 0.10), linear or non-linear relationship with …
Effect Of Fragmentation And Habitat Type On Coastal Nekton In Mississippi, Thomas Bennett Sevick
Effect Of Fragmentation And Habitat Type On Coastal Nekton In Mississippi, Thomas Bennett Sevick
Master's Theses
Coastal wetlands are extremely productive ecosystems that support an abundance of organisms at higher tropic levels. Coastal wetlands also act as important buffers from storms and help protect major cornerstones of coastal economies, such as tourism and fisheries. Despite the clear need for the protection of these habitats, anthropogenic use of coastal wetlands has increased in frequency and intensity, resulting in the fragmentation of once continuous habitats. A central challenge to assessing the impact of marsh fragmentation is the lack of quantitative distribution and abundance data from specific habitat types. This is especially true for species that are not commercially …
Reconstitution Of Munc18-Dependent Mast Cell Degranulation, Matthew Grant Arnold
Reconstitution Of Munc18-Dependent Mast Cell Degranulation, Matthew Grant Arnold
Master's Theses
Mast cells are specialized secretory leukocytes that play diverse roles in the body, mediated by release of histamine and other pharmacologically active substances. Although offering essential protection in innate and adaptive immunity, mast cells are also essential to the progression of inflammatory diseases, including allergy and asthma, (Theoharides et al., 2012). Exocytosis of pro-inflammatory mast cell mediators in response to otherwise innocuous antigens relies on evolutionarily-conserved membrane fusion machinery. These proteins, called SNAREs are regulated by the Sec1/Munc18 (SM) protein family (Axle Lorentz, Baumann, Vitte, & Blank, 2012). Mast cells express three mammalian Munc18 isoforms (a, b, and c), which …
Decolonizing The Ya North: Environmental Injustice In Sherri L. Smith’S Orleans, Micah-Jade M. Coleman
Decolonizing The Ya North: Environmental Injustice In Sherri L. Smith’S Orleans, Micah-Jade M. Coleman
Master's Theses
Young Adult (YA) dystopias, in recent years, have imagined a future world fueled by the overuse and misuse of technology, the advancement of science for human gain, as well as societies ruled by governments that govern based on their own self-interests and economic gain. Such novels have opened the door for discussion about how the present-day actions of societies can impact the future of the environment; yet many only focus their attention on societies in the North— regions considered “developed” by the western world. In her YA novel, Orleans (2014), Sherri L. Smith focuses attention on the aftermath of Hurricane …
Effects Of Fire On Soil Co₂ Efflux In A Mature Longleaf Pine Forest, Knox Lemee Flowers
Effects Of Fire On Soil Co₂ Efflux In A Mature Longleaf Pine Forest, Knox Lemee Flowers
Master's Theses
This study was conducted from 2012-2013 in a 96 year old longleaf pine at the Lake Thoreau Environmental Center located Lamar County, MS. Measurements of soil CO₂ efflux (i.e., soil respiration or SR) rates (µmol m-2 sec-1) were taken across 8 field plots (4 burned, 4 unburned) before and after a prescribed fire on that occurred in May, 2012. These measurements were taken over diurnal cycles using a LICOR LI-8100A automated soil gas flux system with long term chambers. SR rates and soil temperature measurements were collected during 3 sampling periods in 2012 and 1 sampling period …
Growth And Reproduction Of Southern Flounder (Paralichthys Lethostigma) In The North-Central Gulf Of Mexico, Morgan Marie Corey
Growth And Reproduction Of Southern Flounder (Paralichthys Lethostigma) In The North-Central Gulf Of Mexico, Morgan Marie Corey
Master's Theses
Southern Flounder Paralichthys lethostigma is the most commonly harvested flatfish in the north-central Gulf of Mexico (GOM) and supports a major inshore recreational fishery, yet knowledge of the species’ life history is greatly limited. The objective of this research was to describe the growth and reproduction of Southern Flounder in the Mississippi stock. Fish were collected during September 2014 to March 2016 using primarily recreational fishing techniques. Otoliths (n = 313) were sectioned to estimate age, and multiple length-at-age models were fit to total length (TL, mm) and age estimate (y) data. Gonadal tissue samples (n = 221) …
Development Of Genomic Resources For The Evaluation Of Red Snapper, An Emerging Species Candidate For Marine Aquaculture And Stock Enhancement, Adrienne Elise Norrell
Development Of Genomic Resources For The Evaluation Of Red Snapper, An Emerging Species Candidate For Marine Aquaculture And Stock Enhancement, Adrienne Elise Norrell
Master's Theses
The northern red snapper (Lutjanus campechanus) is a highly targeted reef fish candidate for marine aquaculture and stock enhancement in the southern United States. This work aimed to develop genomic resources for the genetic management of aquaculture programs and to investigate population structure using high-throughput sequencing technologies. Eighty-four new microsatellite markers were developed through screening of Illumina paired-end sequencing reads. Microsatellite loci and Single Nucleotide Polymorphisms (SNPs) generated through Restriction Site Associated DNA (RAD) sequencing were assayed in 5 outbred full-sib families to construct a high-density linkage map of the red snapper genome. The map consists of 7,964 …
Community Structure And Production Of The Macrobenthos On Four Artificial Reefs In The Mississippi Sound In Relation To Substrate And Profile Type, Patrick Daniel Gillam
Community Structure And Production Of The Macrobenthos On Four Artificial Reefs In The Mississippi Sound In Relation To Substrate And Profile Type, Patrick Daniel Gillam
Master's Theses
In recent years, the Mississippi Department of Marine Resources (DMR) has made a concerted effort to enhance its coastal fishery resources by creating artificial reefs. Through this effort, 73 nearshore reefs have been created across the MS coast. Different substrate types used to construct MS artificial reefs include oyster shell and cement rubble. Two types of reef architecture used include high profile breakwater and low profile submerged structures. This study compared the benthic biota associated with oyster shell and cement rubble substrates among four artificial reefs representing high and low profile structures in summer 2011. Colonized benthic biota were quantified …
Age, Growth, Reproduction, And Diet Of The Finetooth Shark, Carcharhinus Isodon, In The Northern Gulf Of Mexico, Jeremy Michael Higgs
Age, Growth, Reproduction, And Diet Of The Finetooth Shark, Carcharhinus Isodon, In The Northern Gulf Of Mexico, Jeremy Michael Higgs
Master's Theses
The current study examined life history parameters of the finetooth shark, Carcharhinus isodon, in the northern Gulf of Mexico (nGOM) to provide an accurate description of the species’ reproductive biology, age, growth and diet composition. A total of 1,489 finetooth sharks (830 female; 659 male) were collected from coastal waters of the nGOM between Apalachicola Bay, Florida (29.873° N and 84.514° W) and East Bay, Louisiana (28.959° N and 89.279° W) from June 2006 through October 2013. Peak reproductive development occurred during May/June for both males and females, which was followed by mating and an 11-12 month gestation period. …
Effects Of Intermittent Pneumatic Compression On Leg Blood Flow And Vascular Function After Spinal Cord Injury, Lena Marie Cialdella
Effects Of Intermittent Pneumatic Compression On Leg Blood Flow And Vascular Function After Spinal Cord Injury, Lena Marie Cialdella
Master's Theses
Intermittent pneumatic compression (IPC) can increase leg blood flow (BF) in able-bodied persons. Whether IPC can alter leg BF, and improve vascular function in people with SCI is currently unknown. PURPOSE: Test the hypothesis that acute IPC will increase leg BF, and improve vascular function in SCI. METHODS: Participants (n=8; injury level: T3 and below; A.S.I.A. class A-C; age: 41±17 yrs) were recruited for a 1-hour IPC session performed in one leg (experimental leg; EXP), with the other serving as a control (CON). IPC consisted of sequential, foot-to-calf compressions (4-s inflate, 16-s deflate; 3 compressions/min). Posterior-tibial artery BF (Doppler-ultrasound) was …
Predicting Dna Methylation State Of Cpg Dinucleotide Using Genome Topological Features And Deep Networks, Yiheng Wang
Predicting Dna Methylation State Of Cpg Dinucleotide Using Genome Topological Features And Deep Networks, Yiheng Wang
Master's Theses
The hypo- or hyper-methylation of the human genome is one of the epigenetic features of leukemia. However, experimental approaches have only determined the methylation state of a small portion of the human genome. We developed deep learning based (stacked denoising autoencoders, or SdA) software named “DeepMethyl” to predict the methylation state of DNA CpG dinucleotides using features inferred from three-dimensional genome topology (based on Hi-C) and DNA sequence patterns. We used the experimental data from immortalised myelogenous leukemia (K562) and healthy lymphoblastoid (GM12878) cell lines to train the learning models and assess prediction performance. We have tested various SdA architectures …
Fire And Fuels: Vegetation Change Over Time In The Zuni Mountains, New Mexico, Luke Wylie
Fire And Fuels: Vegetation Change Over Time In The Zuni Mountains, New Mexico, Luke Wylie
Master's Theses
The Zuni Mountains are a region that has been dramatically changed by human interference. Anthropogenically, fire suppression practices have allowed a buildup of fuels and caused a change in the fire-adapted ponderosa pine ecosystem such that the new ecosystem now incorporates many fire-intolerant species. As a result, the low-severity fires that the ecosystem once depended on to regenerate the forest are much reduced, and these low-severity fires are now replaced by crown-level infernos that threaten the forest and nearby towns. In order to combat these effects, land managers are implementing fuel reduction practices and are striving to better understand the …
Fishery And Population Dynamics Of Mississippi’S Spotted Seatrout, David Arthur Dippold
Fishery And Population Dynamics Of Mississippi’S Spotted Seatrout, David Arthur Dippold
Master's Theses
Spotted Seatrout (Cynoscion nebulosus) is the most popular recreational inshore fishery in Mississippi coastal waters. Because of the popularity of Spotted Seatrout in Mississippi as a recreational target and the magnitude of harvest, quantitative approaches to describe the population and fishery dynamics of the Mississippi stock are needed to continue the sustainability of the stock. Quantitative approaches to describing stock dynamics are useful because they can help describe population characteristics, assess the current status of the stock, and be used to evaluate alternative management strategies. In this thesis, I use a suite of quantitative methods to describe, evaluate, …