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Full-Text Articles in Life Sciences

A Metadata Reporting Framework (Frames) For Synthesis Of Ecohydrological Observations, Danielle S. Christianson, Charuleka Varadharajan, Bradley O. Christoffersen, Matteo Detto, Boris Faybishenko, Bruno O. Gimenez, Val Hendrix, Kolby J. Jardine, Robinson Negron-Juarez, Gilberto Z. Pastorello Nov 2017

A Metadata Reporting Framework (Frames) For Synthesis Of Ecohydrological Observations, Danielle S. Christianson, Charuleka Varadharajan, Bradley O. Christoffersen, Matteo Detto, Boris Faybishenko, Bruno O. Gimenez, Val Hendrix, Kolby J. Jardine, Robinson Negron-Juarez, Gilberto Z. Pastorello

Biology Faculty Publications and Presentations

Metadata describe the ancillary information needed for data preservation and independent interpretation, comparison across heterogeneous datasets, and quality assessment and quality control (QA/QC). Environmental observations are vastly diverse in type and structure, can be taken across a wide range of spatiotemporal scales in a variety of measurement settings and approaches, and saved in multiple formats. Thus, well-organized, consistent metadata are required to produce usable data products from diverse environmental observations collected across field sites. However, existing metadata reporting protocols do not support the complex data synthesis and model-data integration needs of interdisciplinary earth system research. We developed a metadata reporting …


Inhibition Of Post-Transcriptional Steps In Ribosome Biogenesis Confers Cytoprotection Against Chemotherapeutic Agents In A P53-Dependent Manner, Russell T Sapio, Anastasiya N Nezdyur, Matthew Krevetski, Leonid Anikin, Vincent J Manna, Natalie Minkovsky, Dimitri G Pestov Aug 2017

Inhibition Of Post-Transcriptional Steps In Ribosome Biogenesis Confers Cytoprotection Against Chemotherapeutic Agents In A P53-Dependent Manner, Russell T Sapio, Anastasiya N Nezdyur, Matthew Krevetski, Leonid Anikin, Vincent J Manna, Natalie Minkovsky, Dimitri G Pestov

Rowan-Virtua School of Osteopathic Medicine Faculty Scholarship

The p53-mediated nucleolar stress response associated with inhibition of ribosomal RNA transcription was previously shown to potentiate killing of tumor cells. Here, we asked whether targeting of ribosome biogenesis can be used as the basis for selective p53-dependent cytoprotection of nonmalignant cells. Temporary functional inactivation of the 60S ribosome assembly factor Bop1 in a 3T3 cell model markedly increased cell recovery after exposure to camptothecin or methotrexate. This was due, at least in part, to reversible pausing of the cell cycle preventing S phase associated DNA damage. Similar cytoprotective effects were observed after transient shRNA-mediated silencing of Rps19, but not …