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Full-Text Articles in Life Sciences

Forest Resources For Bioenergy, Gerry Solano Avila Dec 2017

Forest Resources For Bioenergy, Gerry Solano Avila

Doctoral Dissertations

The overall objective of this dissertation is to evaluate forest resources biomass availability for the production of bioenergy. Chapter II provides measures of the impact that the road sustainability criteria have on the supply of feedstock for forest products and bioenergy. A linear cost minimization programming is used in estimating forest biomass supply curves. Chapter III provides estimates on the changes in US timberland acreages overtime and the ability of timberland to meet conventional timber products and woody biomass demand within the conterminous United States. Chapter IV utilizes the Biofuels Facility Location Analysis Modeling Endeavor (BioFLAME), a Geographic Information System …


Improving The Thermal Stability Of Cellobiohydrolase Cel7a From Hypocrea Jecorina By Directed Evolution, Frits Goedegebuur, Lydia Dankmeyer, Peter Gualfetti, Saeid Karkehabadi, Henrik Hansson, Suvamay Jana, Vicky Huynh, Bradley R. Kelemen, Paulien Kruithof, Edmund A. Larenas, Pauline J. M. Teunissen, Jerry Ståhlberg, Christina M. Payne, Colin Mitchinson, Mats Sandgren Aug 2017

Improving The Thermal Stability Of Cellobiohydrolase Cel7a From Hypocrea Jecorina By Directed Evolution, Frits Goedegebuur, Lydia Dankmeyer, Peter Gualfetti, Saeid Karkehabadi, Henrik Hansson, Suvamay Jana, Vicky Huynh, Bradley R. Kelemen, Paulien Kruithof, Edmund A. Larenas, Pauline J. M. Teunissen, Jerry Ståhlberg, Christina M. Payne, Colin Mitchinson, Mats Sandgren

Chemical and Materials Engineering Faculty Publications

Secreted mixtures of Hypocrea jecorina cellulases are able to efficiently degrade cellulosic biomass to fermentable sugars at large, commercially relevant scales. H. jecorina Cel7A, cellobiohydrolase I, from glycoside hydrolase family 7, is the workhorse enzyme of the process. However, the thermal stability of Cel7A limits its use to processes where temperatures are no higher than 50 °C. Enhanced thermal stability is desirable to enable the use of higher processing temperatures and to improve the economic feasibility of industrial biomass conversion. Here, we enhanced the thermal stability of Cel7A through directed evolution. Sites with increased thermal stability properties were combined, and …


Adoption Of Switchgrass Cultivation For Biofuel Under Uncertainty: A Discrete-Time Modeling Approach, Pralhad Burli, Eric Forgoston, Pankaj Lal, Lora Billings, Bernabas Wolde Jul 2017

Adoption Of Switchgrass Cultivation For Biofuel Under Uncertainty: A Discrete-Time Modeling Approach, Pralhad Burli, Eric Forgoston, Pankaj Lal, Lora Billings, Bernabas Wolde

Lora Billings

Production of biofuels from cellulosic sources, such as switchgrass, is being encouraged through mandates, incentives, and subsidies. However, uncertainty in future prices coupled with large establishment costs often inhibit their cultivation. Owing to their inability to incorporate uncertainty and dynamic decision-making, standard discounted cash flow techniques are ineffective for analyzing such investments. We formulate a discrete-time binomial framework to model output prices, allowing us to incorporate price uncertainty, stand age, and variable crop yields into the analytical framework. We analyze the feasibility of investments in switchgrass cultivation under varying price transition paths, evaluate the relationship between risk …


Adoption Of Switchgrass Cultivation For Biofuel Under Uncertainty: A Discrete-Time Modeling Approach, Pralhad Burli, Eric Forgoston, Pankaj Lal, Lora Billings, Bernabas Wolde Jul 2017

Adoption Of Switchgrass Cultivation For Biofuel Under Uncertainty: A Discrete-Time Modeling Approach, Pralhad Burli, Eric Forgoston, Pankaj Lal, Lora Billings, Bernabas Wolde

Eric Forgoston

Production of biofuels from cellulosic sources, such as switchgrass, is being encouraged through mandates, incentives, and subsidies. However, uncertainty in future prices coupled with large establishment costs often inhibit their cultivation. Owing to their inability to incorporate uncertainty and dynamic decision-making, standard discounted cash flow techniques are ineffective for analyzing such investments. We formulate a discrete-time binomial framework to model output prices, allowing us to incorporate price uncertainty, stand age, and variable crop yields into the analytical framework. We analyze the feasibility of investments in switchgrass cultivation under varying price transition paths, evaluate the relationship between risk …


Adoption Of Switchgrass Cultivation For Biofuel Under Uncertainty: A Discrete-Time Modeling Approach, Pralhad Burli, Eric Forgoston, Pankaj Lal, Lora Billings, Bernabas Wolde Jul 2017

Adoption Of Switchgrass Cultivation For Biofuel Under Uncertainty: A Discrete-Time Modeling Approach, Pralhad Burli, Eric Forgoston, Pankaj Lal, Lora Billings, Bernabas Wolde

Pankaj Lal

Production of biofuels from cellulosic sources, such as switchgrass, is being encouraged through mandates, incentives, and subsidies. However, uncertainty in future prices coupled with large establishment costs often inhibit their cultivation. Owing to their inability to incorporate uncertainty and dynamic decision-making, standard discounted cash flow techniques are ineffective for analyzing such investments. We formulate a discrete-time binomial framework to model output prices, allowing us to incorporate price uncertainty, stand age, and variable crop yields into the analytical framework. We analyze the feasibility of investments in switchgrass cultivation under varying price transition paths, evaluate the relationship between risk …


The Microbial Ecology Of Bacterial Lignocellulosic Degradation In The Ocean, Hannah Laing Yee Woo May 2017

The Microbial Ecology Of Bacterial Lignocellulosic Degradation In The Ocean, Hannah Laing Yee Woo

Doctoral Dissertations

The overarching theme of my dissertation is to study the role of bacteria in lignocellulose degradation. In recent years, more research has investigated the biodegradability of lignocellulose for biofuel production. The components of the lignocellulosic plant cell wall are considered intrinsically recalcitrant due to their structure. However, we hypothesize that these components are not intrinsically recalcitrant but their biodegradation is contingent on the environmental conditions, particularly the bacterial diversity. We believe bacteria will become especially important in lignocellulose degradation in conditions that are unfavorable for white-rot fungi. Therefore, we investigated the potential for lignin degradation by bacteria in the ocean …


Candidate Perennial Bioenergy Grasses Have A Higher Albedo Than Annual Row Crops, Jesse N. Miller, Andy Vanloocke, Nuria Gomez-Casanovas, Carl J. Bernacchi Jan 2017

Candidate Perennial Bioenergy Grasses Have A Higher Albedo Than Annual Row Crops, Jesse N. Miller, Andy Vanloocke, Nuria Gomez-Casanovas, Carl J. Bernacchi

Andy VanLoocke

The production of perennial cellulosic feedstocks for bioenergy presents the potential to diversify regional economies and the national energy supply, while also serving as climate ‘regulators’ due to a number of biogeochemical and biogeophysical differences relative to row crops. Numerous observational and model-based approaches have investigated biogeochemical trade-offs, such as increased carbon sequestration and increased water use, associated with growing cellulosic feedstocks. A less understood aspect is the biogeophysical changes associated with the difference in albedo (a), which could alter the local energy balance and cause local to regional cooling several times larger than that associated with offsetting carbon. Here, …


Industrial Oilseed Crops For Tennessee, Jason P. De Koff, Prabodh Illukpitiya, Shivam Chawla, Richard Link Jan 2017

Industrial Oilseed Crops For Tennessee, Jason P. De Koff, Prabodh Illukpitiya, Shivam Chawla, Richard Link

Extension Publications

No abstract provided.


Overexpression Of Sbmyb60 In Sorghum Bicolor Impacts Both Primary And Secondary Metabolism, Erin D. Scully, Tammy Gries, Nathan A. Palmer, Gautam Sarath, Deanna L. Funnell-Harris, Lisa Baird, Paul Twigg, Javier Seravalli, Thomas E. Clemente, Scott E. Sattler Jan 2017

Overexpression Of Sbmyb60 In Sorghum Bicolor Impacts Both Primary And Secondary Metabolism, Erin D. Scully, Tammy Gries, Nathan A. Palmer, Gautam Sarath, Deanna L. Funnell-Harris, Lisa Baird, Paul Twigg, Javier Seravalli, Thomas E. Clemente, Scott E. Sattler

Center for Plant Science Innovation: Faculty and Staff Publications

  • Few transcription factors have been identified in C4 grasses that either positively or negatively regulate monolignol biosynthesis.
  • Previously, the overexpression of SbMyb60 in sorghum (Sorghum bicolor) has been shown to induce monolignol biosynthesis, which leads to elevated lignin deposition and altered cell wall composition. To determine how SbMyb60 overexpression impacts other metabolic pathways, RNA-Seq and metabolite profiling were performed on stalks and leaves.
  • 35S::SbMyb60 was associated with the transcriptional activation of genes involved in aromatic amino acid, S-adenosyl methionine (SAM) and folate biosynthetic pathways. The high coexpression values between SbMyb60 and genes assigned to these pathways indicate …