Life Sciences Commons^™

A Nuclear Dna Perspective On Delineating Evolutionarily Significant Lineages In Polyploids: The Case Of The Endangered Shortnose Sturgeon (Acipenser Brevirostrum), Tim L. King, Anne P. Henderson, Boyd E. Kynard, Micah C. Kieffer, Douglas L. Peterson, Aaron W. Aunins, Bonnie L. Brown

Biology Publications

The shortnose sturgeon, Acipenser brevirostrum, oft considered a phylogenetic relic, is listed as an “endangered species threatened with extinction” in the US and “Vulnerable” on the IUCN Red List. Effective conservation of A. brevirostrum depends on understanding its diversity and evolutionary processes, yet challenges associated with the polyploid nature of its nuclear genome have heretofore limited population genetic analysis to maternally inherited haploid characters. We developed a suite of polysomic microsatellite DNA markers and characterized a sample of 561 shortnose sturgeon collected from major extant populations along the North American Atlantic coast. The 181 alleles observed at 11 loci …

Barrier Island Morphology And Sediment Characteristics Affect The Recovery Of Dune Building Grasses Following Storm-Induced Overwash, Steven T. Brantley, Spencer Bissett, Donald R. Young, Catherine W. V. Wolner, Laura J. Moore

Biology Publications

Barrier islands are complex and dynamic systems that provide critical ecosystem services to coastal populations. Stability of these systems is threatened by rising sea level and the potential for coastal storms to increase in frequency and intensity. Recovery of dune-building grasses following storms is an important process that promotes topographic heterogeneity and long-term stability of barrier islands, yet factors that drive dune recovery are poorly understood. We examined vegetation recovery in overwash zones on two geomorphically distinct (undisturbed vs. frequently overwashed) barrier islands on the Virginia coast, USA. We hypothesized that vegetation recovery in overwash zones would be driven primarily …

On The Challenges Of Modeling The Net Radiative Forcing Of Wetlands: Reconsidering Mitsch Et Al. 2013, Scott C. Neubauer

Biology Publications

Wetlands play a role in regulating global climate by removing carbon dioxide (CO2) from the atmosphere and sequestering it as soil carbon, and by emitting methane (CH4) and nitrous oxide (N2O) to the atmosphere. In a recent article in this journal (Mitsch et al. Landscape Ecol 28:583–597, 2013), CO2 sequestration and CH4 emissions were modeled for several freshwater wetlands that vary in vegetation type, climate, and hydrology. The authors of that study made significant errors that caused them to underestimate the importance of wetland CH4 emissions on climate dynamics. Here, I reanalyze the Mitsch et al. dataset and show that …

Morphine Enhances Hiv-1sf162-Mediated Neuron Death And Delays Recovery Of Injured Neurites, Ruturaj R. Masvekar, Nazira El-Hage, Kurt F. Hauser, Pamela E. Knapp

Anatomy and Neurobiology Publications

HIV-1 enters the CNS soon after initial systemic infection; within the CNS parenchyma infected and/or activated perivascular macrophages, microglia and astrocytes release viral and cellular toxins that drive secondary toxicity in neurons and other cell types. Our previous work has largely modeled HIV-neuropathology using the individual viral proteins Tat or gp120, with murine striatal neurons as targets. To model disease processes more closely, the current study uses supernatant from HIV-1-infected cells. Supernatant from HIV-1SF162-infected differentiated-U937 cells (HIV+sup) was collected and p24 level was measured by ELISA to assess the infection. Injection drug abuse is a significant risk factor for HIV-infection, …

Post-Acute Brain Injury Urinary Signature: A New Resource For Molecular Diagnostics, Andrew K. Ottens, Jillian E. Stafflinger, Hailey E. Griffin, Richard D. Kunz, David X. Cifu, Janet P. Niemeier

Anatomy and Neurobiology Publications

Heterogeneity within brain injury presents a challenge to the development of informative molecular diagnostics. Recent studies show progress particularly in cerebrospinal fluid with biomarker assays targeting one or a few structural proteins. Protein-based assays in peripheral fluids, however, have been more challenging to develop in part due to restricted and intermittent barrier access. Further, a greater number of molecular variables may be required to inform on patient status given the multifactorial nature of brain injury. Presented is an alternative approach profiling peripheral fluid for a class of small metabolic by-products rendered by ongoing brain pathobiology. Urine specimens were collected for …

Bioinformatics And Biomedical Informatics, Kayvan Najarian, Rachid Deriche, Mark A. Kon, Nina S. T. Hirata

Computer Science Publications

No abstract provided.

In Vitro Propagation Of Gentiana Scabra Bunge – An Important Medicinal Plant In The Chinese System Of Medicines, Shih-Hung Huang, Dinesh Chandra Agrawal, Fang-Sheng Wu, Hsin-Sheng Tsay

Biology Publications

Background: Gentiana scabra Bunge commonly known as `Long dan cao' in China has been used in traditional Chinese medicines for more than 2000 years. Dry roots and rhizome of the herb have been used for the treatment of inflammation, anorexia, indigestion and gastric infections. Iridoids and secoiridoids are the main bioactive compounds which attribute to the pharmacological properties of this plant. The species is difficult to mass propagate by seed due to the low percentage of germination and limited dormancy period. Wild populations in some locations are considered to be in the endangered category due to over exploitation.

Results: In …

Reduction Of The Pectoral Spine And Girdle In Domesticated Channel Catfish Is Likely Caused By Changes In Selection Pressure, Michael L. Fine

Biology Publications

Locked pectoral spines of the Channel Catfish Ictalurus punctatus more than double the fish's width and complicate ingestion by gape-limited predators. The spine mates with the pectoral girdle, a robust structure that anchors the spine. This study demonstrates that both spine and girdle exhibit negative allometric growth and that pectoral spines and girdles are lighter in domesticated than in wild Channel Catfish. This finding could be explained by changes in selection pressure for spine growth during domestication or by an epigenetic effect in which exposure to predators in wild fish stimulates pectoral growth. We tested the epigenetic hypothesis by exposing …

Spatiotemporal Variability And Sound Characterization In Silver Croaker Plagioscion Squamosissimus (Sciaenidae) In The Central Amazon, Alfredo Borie, Hin-Kiu Mok, Ning L. Chao, Michael L. Fine

Biology Publications

Background

The fish family Sciaenidae has numerous species that produce sounds with superfast muscles that vibrate the swimbladder. These muscles form post embryonically and undergo seasonal hypertrophy-atrophy cycles. The family has been the focus of numerous passive acoustic studies to localize spatial and temporal occurrence of spawning aggregations. Fishes produce disturbance calls when hand-held, and males form aggregations in late afternoon and produce advertisement calls to attract females for mating. Previous studies on five continents have been confined to temperate species. Here we examine the calls of the silver croakerPlagioscion squamosissimus, a freshwater equatorial species, which experiences constant …

Regional And Scale-Specific Effects Of Land Use On Amphibian Diversity [Poster], James R. Vonesh, David Marsh, J. J. Apodaca, Karen H. Beard, Jane M. Bell, Christine Bozarth, Derrick Carper, Julie Charbonnier, Bradley J. Cosentino, Andreia Dantas, Elizabeth A. Forys, Miranda Foster, Jaquelyn General, Kristen S. Genet, Macie Hanneken, Kyle Hess, Shane Hill, Faisal Iqbal, Kara Jones, Nancy E. Karraker, Eran Kilpatrick, Tom A. Langen, James Langford, Katherine Lauer, Alison J. Mccarthy, Joseph Neale, Saumya Patel, Austin Patton, Cherie Southwick, Nathaniel Stearrett, Nick Steijn, Mohammad Tasleem, Joseph Taylor

Biology Presentations

Background/Question/Methods

Habitat loss and degradation influence amphibian distributions and are important drivers of population declines. Our previous research demonstrated that road disturbance, development and wetland area consistently influence amphibian richness across regions of the U.S. Here, we examined the relative importance of these factors in different regions and at multiple spatial scales. Understanding the scales at which habitat disturbance may be affecting amphibian distributions is important for conservation planning. Specifically, we asked: 1) Over what spatial scales do distinct landscape features affect amphibian richness? and 2) Do road types (non-rural and rural) have similar effects on amphibian richness? This is …

A Metagenomic Assessment Of The Bacteria Associated With Lucilia Sericata And Lucilia Cuprina (Diptera: Calliphoridae), Baneshwar Singh, Tawni L. Crippen, Longyu Zheng, Andrew T. Fields, Ziniu Yu, Qun Ma, Thomas K. Wood, Scot E. Dowd, Micah Flores, Jeffery K. Tomberlin, Aaron M. Tarone

Forensic Science Publications

Lucilia Robineau-Desvoidy (Diptera: Calliphoridae) is a blow fly genus of forensic, medical, veterinary, and agricultural importance. This genus is also famous because of its beneficial uses in maggot debridement therapy (MDT). Although the genus is of considerable economic importance, our knowledge about microbes associated with these flies and how these bacteria are horizontally and trans-generationally transmitted is limited. In this study, we characterized bacteria associated with different life stages of Lucilia sericata (Meigen) and Lucilia cuprina(Wiedemann) and in the salivary gland of L. sericata by using 16S rDNA 454 pyrosequencing. Bacteria associated with the salivary gland of …

Neuropathological Responses To Chronic Nmda In Rats Are Worsened By Dietary N-3 Pufa Deprivation But Are Not Ameliorated By Fish Oil Supplementation, Vasken L. Keleshian, Matthew Kellom, Hyung-Wook Kim, Ameer Y. Taha, Yewon Cheon, Miki Igarashi, Stanley I. Rapoport, Jagadeesh S. Rao

Anatomy and Neurobiology Publications

Background

Dietary long-chain n-3 polyunsaturated fatty acid (PUFA) supplementation may be beneficial for chronic brain illnesses, but the issue is not agreed on. We examined effects of dietary n-3 PUFA deprivation or supplementation, compared with an n-3 PUFA adequate diet (containing alpha-linolenic acid [18:3 n-3] but not docosahexaenoic acid [DHA, 22:6n-3]), on brain markers of lipid metabolism and excitotoxicity, in rats treated chronically with NMDA or saline.

Methods

Male rats after weaning were maintained on one of three diets for 15 weeks. After 12 weeks, each diet group was injected i.p. daily with saline (1 ml/kg) or a subconvulsive dose …

Vcu's Green Richmond Research, Nadia Rentia

AUCTUS: The Journal of Undergraduate Research and Creative Scholarship

The impact of urbanization on the dogwood tree was the VCU junior Kaitlyn Parkman’s focus as she researched hundreds of trees in Richmond.