Life Sciences Commons^™

Of Rats And Men, Thomas S. Walsh

Capstones

This capstone is a data-driven investigation into New York City's rat problem. By using publicly available government data to map rat activity in NYC, I identified several socio-economic variables that correlate with rat populations at the community district, borough, and city-scale. I used these findings (mainly that rat problems are linked to lower incomes) as the basis of an investigation, which includes interviews with residents, experts, and city officials. Prof. Bobby Corrigan, urban rodentologist and formerly with the NYC Department of Health criticizes the city's efforts for the first time on the record.

https://thomasseiyawalsh.wixsite.com/ratstone

Resource Selection, Survival, And Departure Of Adult Female Mallards From The Lake St. Clair Region During Autumn And Winter, Matthew Palumbo

Electronic Thesis and Dissertation Repository

During autumn and winter, mallards (Anas platyrhynchos) maximize fitness through their spatiotemporal distribution to avoid mortality risks while balancing trade-offs to access foods to undergo migration and maintain homeostasis. Thousands of mallards use Lake St. Clair as it is an important, but threatened, migratory staging area in the Great Lakes. My goal was to understand how mallards were selecting resources in the region and potential relationships of selection strategies. My objectives were to estimate resource selection of adult female mallards, in relation to perceived risk of hunting mortality, and determine if selection strategies were related to survival and …

Regulation Of Liver Mitochondrial Metabolism During Hibernation By Post-Translational Modification, Katherine E. Mathers

Electronic Thesis and Dissertation Repository

Hibernation, characterized by a seasonal reduction in metabolism and body temperature, allows animals to conserve energy when environmental conditions (e.g. temperature, food availability) are unfavourable. During hibernation, small mammals such as the 13-lined ground squirrel (Ictidomys tridecemlineatus) cycle between two distinct metabolic states: torpor, where metabolic rate is suppressed by >95% and body temperature falls to ~5 °C, and interbout euthermia (IBE), where metabolic rate and body temperature rapidly increase and are maintained at euthermic levels several hours. Suppression of metabolism during entrance into torpor is paralleled by rapid suppression of liver mitochondrial metabolism. In my thesis, I …

The Spatial Ecology And Microhabitat Selection Of The Pygmy Rattlesnake (Sistrurus Miliarius) In Southwestern Missouri, Dylan Wallace Maag

MSU Graduate Theses

Despite a wide distribution throughout the southeastern United States, pygmy rattlesnakes (Sistrurus miliarius) have received less research attention than many other rattlesnake species. I captured a total of 33 S. miliarius at the Drury-Mincy Conservation Area (DMCA) and retained 14 large individuals (mostly gravid females) for a radio telemetry study. Snakes were primarily captured during evening road driving surveys and were encountered rarely with any other sampling technique. Sistrurus miliarius are widespread at DMCA where they were encountered in forest, savanna, and glade habitats. Snakes selected microhabitats with more vegetative cover and tree canopy closure than random sites …

Escorting Of Mother-Calf Pairs Of Humpback Whales (Megaptera Novaeangliae) In The Colombian Pacific During The Breeding Season, Natalia Botero Acosta

Dissertations

Humpback whales (Megaptera novaeangliae) belonging to the “breeding G-stock” annually migrate from the Antarctic Peninsula and southern Chile to the southeastern Pacific to reproduce. Associations between mother-calf pairs and escorts were examined in the Gulf of Tribugá, northern Colombian Pacific, using photo-identification and behavioral/spatial sampling. Research hypotheses included: 1. The association between cows and escorts is short-lived, consistent with a male reproductive strategy, 2. The presence of escort(s) elicits a behavioral response from mother-calf pairs and, 3. The patterns of spatial distribution reflect the spatial segregation of maternal females. Groups were classified as mother-calf pairs (Mc), mother, calf …

Evaluating Social Network Dynamics Of Bigg’S Killer Whales (Orcinus Orca) And Vessel Traffic Within A Transboundary Region: Implications For Conservation Management, Courtney Smith

Dissertations

The social lives of animals are defined by group dynamics based on the nature and strength of associations and movements between individuals, often resulting in highly complex and interconnected social networks. However, understanding of how environmental variables may shape this structure is poorly understood. Within the inland waters of Washington State and southern Vancouver Island, British Columbia, mammal-eating Bigg’s (transient) killer whales occur in relatively small, but stable social groups. Group size and occurrence in recent years has increased, coinciding with a growing whale watching industry. Given the central importance of the social network within killer whale population dynamics, such …

Evaluating The Ecological Status Of The Introduced Nile Monitor (Varanus Niloticus) In Florida: Forecasting Presence And Population Expansion Using Computational Geographic Information Systems, Noah G. Cohen

HCNSO Student Theses and Dissertations

The Nile monitor (Varanus niloticus) is a large, carnivorous lizard that has become a notorious invasive species in Florida, USA. Initially released in the 1980s from the pet trade, the species has since established at least three breeding populations and spread throughout much of southern Florida. While current control efforts have failed to eradicate V. niloticus, it is important to attain a better understanding of its invasive dynamics to guide and inform better control strategies. In this study, available georeferenced records of V. niloticus in Florida were compiled and linked to a habitat classification map to evaluate ecotype preferences. Factored …

A Study Of The Urban Red Fox (Vulpes Vulpes) Population In Baton Rouge, Louisiana Using Social Media, Ahsennur Soysal

LSU Master's Theses

Foxes are timid yet resourceful animals that are integrated into many urban environments. Because they are elusive, collecting information about the number of urban foxes, their diet and spatial distribution, their interactions with the ecological community in their urban habitat, as well as residents’ response to them, is difficult. Involving stakeholders to participate in the data collection on wildlife via citizen science on social media is one way to overcome this complication, while simultaneously engaging residents in the ecology happening around them. Therefore, we used social media as the platform to engage the public to document and map the foxes …

Herpetological Collections At Pittsburg State University: Assessing Collecting Patterns And Analysis Of Spatial And Temporal Origin Of Specimens., Natalia Agostini Schneider

Electronic Theses & Dissertations

Natural History Collections are a rich source of biological data. Each specimen contains data for that species’ presence for a specific location and time, providing researchers with essential biological information. Importantly, this information can be preserved and re-evaluated for hundreds of years. To maintain specimens through time, good curation protocols are essential. The Herpetology Collection (henceforth HC) at Pittsburg State University houses 1,631 specimens, representing 181 species and subspecie collected from 23 U.S. states, Mexico and Manitoba, Canada. The majority of specimens (78.6%) were collected from the four-state area (Kansas, Missouri, Arkansas and Oklahoma). Specimens collected exclusively in Kansas comprise …

The Richness And Relative Abundance Of Small Mammals In Old Surface Coal-Mined Sites In Crawford And Cherokee Counties, Kansas, Fabio Giacomelli

Electronic Theses & Dissertations

Species richness and relative abundance (RA) of the small terrestrial mammals were accessed in 20 different unreclaimed old coal mined sites in Crawford and Cherokee counties, southeast Kansas in 2014. Lines of Victor™ wooden snap-traps were set in three habitat types in each area: grassy, brushy and forested during 3-days period in each of the four seasons.

Southeast Kansas was heavily surface-mined (strip-mined) between the 1930’s and the 1970’s and many of these sites were not reclaimed (restored to the appearance of its original landscape). This has resulted in many types of altered habitats in this region such as strip-pits …

Bee Communities On Managed Emergent Wetlands In The Lower Mississippi Alluvial Valley Of Arkansas, Phillip Lee Stephenson

Graduate Theses and Dissertations

Native bee communities that use emergent wetlands are among the least studied systems in bee research. Most native bee species are thought to be in decline based on the loss of usable habitat across the United States. I surveyed emergent wetlands in the lower Mississippi Alluvial Valley of Arkansas during the summers of 2015 and 2016 using pan traps, blue-vane traps, and sweep nets to determine the current status of bee communities in this system. I surveyed 11 sites in 2015 and 17 sites in 2016 and found that bee communities were similar in actively versus passively managed emergent wetlands. …

The Behavioral Effects Of Feeding Enrichment On A Zoo-Housed Herd Of African Elephants (Loxodonta Africana), Caroline Marie Driscoll

Graduate Theses

A comprehensive study on the behavioral effects of feeding enrichment was conducted on six African elephants housed at the North Carolina Zoological Park in Asheboro, NC. The herd is comprised of are two adult males, three adult females, and one subadult female. The study was conducted over a 10-month period and consisted of focal sample observations across three conditions. Observations were recorded during the baseline condition (June to September) and continued through the introduction of feeding enrichment. Behavioral data were also collected when enrichment items were present but food presentation followed the historical husbandry routine, known as the experimental control …

Geographic Variation In Low Frequency Narrow-Band Sounds Produced By Amazon River Dolphins (Inia Geoffrensis) In Brazil And Peru, Grace Olson

Graduate Theses

Relatively few studies have investigated the sound production of Amazon River dolphins (Inia geoffrensis), and many questions remain regarding their social sounds. In this study, we document the presence of “low frequency narrow-band” (LFN) sounds in Amazon River dolphins. Amazon River dolphin LFN sounds were recorded in the Mamirauá Sustainable Development Reserve (Brazil), and 1,512 km away in the Área de Conservación Regional Comunal Tamshiyacu Tahuayo reserve (Peru). A quantitative comparison of LFN sounds produced by these two populations demonstrates evidence of geographic variation. The variation found in the social sounds produced by geographically separated Amazon River dolphin populations provides …

Effects Of Wave Action On The Structure Of Fish Assemblages Across An Exposure Gradient, Lauren Liddon

Master's Theses

Disturbance affects the function and diversity of ecosystems. Increased wave exposure to salt marsh can disturb sediments and cause a loss of habitat. The purpose of this study was to explore the effects of increased wave exposure on diversity, abundance, and functional ecology of estuarine fishes. If increased wave exposure is acting as a disturbance to these habitats, ecological theory (Intermediate Disturbance Hypothesis) predicts that diversity will peak at intermediate frequencies and intensities of disturbance. Fish were sampled from 10 sites monthly for 6 years. The sites were assigned to different exposure categories (Open, Intermediate, and Sheltered) using an exposure …

Habitat Associations With Small Mammal Communities At Wilson's Creek National Battlefield, Stephanie Anne Ellison

MSU Graduate Theses

The purpose of this study was to aid the National Park Service at Wilson’s Creek National Battlefield with the reported habitat monitoring and management goals through vegetation and wildlife surveys within the park. I provided a description of two major habitat types that are of ecological concern, which included non-native ruderal grasslands and upland deciduous woodlands and forests. I evaluated small mammal communities to determine factors that may affect the detection of individual species and examined habitat associations with occupancy, as small mammals are good indicators of habitat quality. My study highlights the need to manage invasive species such as …

Characterization Of The Thermal Environment During Transport Of Commercial Broiler Chickens, Douglas J. Aldridge

Graduate Theses and Dissertations

Transport of commercial broiler chickens from the farm to the processing plant is perceived to compromise welfare under some circumstances. Research has been conducted using European standard equipment to characterize the environment experienced by poultry during broiler transport. In contrast no studies have been reported on the environment experienced by broilers under United States standard industry practices during transport. Moreover, microenvironment temperatures within industry trailers have not been reported.

The present study characterized the thermal micro-environment experienced by broiler chickens during transport across different seasons. The temperatures were influenced by temperature mitigation practices (plastic wrap, double side board, single side …

Botswana’S Elephant-Back Safari Industry – Stress-Response In Working African Elephants And Analysis Of Their Post-Release Movements, Tanya Lama

Masters Theses

Understanding how African elephants (Loxodonta africana) respond to human interactions in ecotourism operations is critical to safeguarding animal and human welfare and sustaining wildlife ecotourism activities. We investigated the stress response of elephants to a variety of tourist activities over a 15-month period at Abu Camp in northern Botswana. We compared fecal glucocorticoid metabolite (FGM) concentrations across three elephant groups, including: eight elephants in an elephant-tourism operation (Abu herd), three elephants previously reintroduced back into the wild from the Abu herd, and wild elephants. There were no differences in FGM concentrations between the three groups of elephants. The highest observed …

The Role Of Phenotypic Integration In Mammalian Tooth Function And Jaw Morphological Diversity, Andrew Conith

Doctoral Dissertations

Here I investigate how two major components of the mammalian feeding system, teeth and jaws, are influenced by functional, environment, and developmental factors. First, I build physical models of the molars from two early mammals, Morganucodon and Kuehneotherium, and compare their ability to process a proxy food item. Early mammals were under strong selection to reduce metabolic costs, so any savings in energy during feeding would be advantageous. I tested the ability of both mammals to process a hard and soft food item with material properties similar to that of the insects they would have likely consumed. Morganucodon was …

Burrowing And Walking Mechanisms Of North American Moles, Yi-Fen Lin

Doctoral Dissertations

Moles (Family Talpidae) are a classic example of extreme specialization, in their case highly derived forelimb morphologies associated with burrowing. Despite many observations of mole burrows and behaviors gathered in the field, we know very little about how and how well moles use their forelimbs to dig tunnels and to walk within the built tunnels to collect and transport food. The first chapter investigates the effect of soil compactness on two sympatric mole species under controlled laboratory conditions. My results demonstrate that increasing soil compactness impedes tunneling performance as evidenced by reduced burrowing speed, increased soil transport, shorter tunnels, shorter …

Autumn Foraging And Staging Ecology Of Eastern Population Sandhill Cranes (Antigone Canadensis Tabida), Everett E. Hanna

Electronic Thesis and Dissertation Repository

Spatial and temporal variation in the density and distribution of waste agricultural grain (grain herein) during staging can affect the carrying capacity of habitats that support avian populations. Such variation in food resources can also have proximate effects on behavioural ecology (e.g., influence optimal behaviour). The Eastern Population of Greater Sandhill Cranes (Antigone canadensis tabida; EP herein) likely began to recolonize Ontario and its historic range starting in the early 1900s and now relies on agricultural grain during migration. Accordingly, ecologists possess little knowledge of how EP crane behavioural ecology may be affected by grain. Thus, my study …

Evolutionary Genetic Aspects Of Host Association In Generalist Ectoparasites, Benoit Talbot

Electronic Thesis and Dissertation Repository

Despite the use of the host for dispersal by most parasite species, the extremely loose relationship typical between highly mobile hosts and generalist ectoparasites may lead to very different gene flow patterns between the two, leading in turn to different spatial genetic structure, and potentially different demographic history. I examined how similar gene flow patterns are between Cimex adjunctus, a generalist ectoparasite of bats present throughout North America, and two of its key bat hosts. I first analyzed the continent-scale genetic structure and demographic history of C. adjunctus and compared it to that of two of its hosts, the …

Breeding Ecology And Habitat Use Of Unisexual Salamanders And Their Sperm-Hosts, Blue-Spotted Salamanders (Ambystoma Laterale), Kristine Hoffmann

Electronic Theses and Dissertations

Unsexual Salamanders within the Blue-Spotted Salamander Complex carry combinations of ambystomatid genomes (those of Blue-Spotted Salamanders, Ambystoma laterale, and Jefferson Salamanders, A. jeffersonianum in Maine). They are nearly all female, breed in wetlands, and use sperm of related species to reproduce. Little is known about their ecology to guide the conservation of this unique lineage. I examined breeding site occupancy, demographics, orientation, and terrestrial habitat selection of Unisexual Salamanders in comparison to Blue-Spotted Salamanders and other amphibians. I compared statistical tests of orientation to determine which was most appropriate for pitfall data.

Unisexual Salamander occupancy at breeding sites was positively …

Measuring Fertilization In Populations Of Sea Scallop (Placopecten Magellanicus): Developing And Testing Methods In The Laboratory And Field, Skylar Bayer

Electronic Theses and Dissertations

Most marine organisms are broadcast spawners, releasing their sperm and eggs into the water column. Methods of measuring in situ fertilization have proven successful with a few model species, which are reviewed in my introductory chapter. However, many commercially exploited species, such as the sea scallop Placopecten magellanicus, have been neglected. Sea scallop populations have greatly increased from fishing closures, but the mechanism behind this response is uncertain, particularly in regard to fertilization. In this dissertation I developed a methodology of measuring fertilization success and spawning events of P. magellanicus, tested it in laboratory and field settings, and …

The Biogeographic Origins And Trophic Ecology Of Maine’S Island Red-Backed Salamanders (Plethodon Cinereus), Nikko-Ideen Shaidani

Electronic Theses and Dissertations

Island populations of terrestrial species have an increased potential, compared to mainland populations, to adapt and diverge, as these populations often are isolated with respect to gene flow from other populations and may be subjected to novel pressures. Indeed, extended isolation of individuals can elicit dramatic changes within populations and is recognized as a common driver of speciation. It is for these reasons that island populations are often a priority for conservation. Plethodontid salamanders are among the most terrestrial of Maine’s amphibians and are not tolerant of prolonged exposure to seawater, and yet, they are found on a number of …

Assessing Behavioral Syndromes In Captive Red Pandas (Ailurus Fulgens) Using An Ethological Approach, Tyler C. Bray

Theses and Dissertations

Animal personality has a significant impact on an animal’s physiology and welfare. Eight captive red pandas were observed to determine if personality can be assessed in this species using an ethological approach. Analysis revealed two behavioral dimensions: 1) Active/Exploratory and 2) Maintenance. Age differences were found in the Active/Exploratory dimension.

Functional Analysis And Treatment Of Self-Injurious Feather Plucking In A Black Vulture (Coragyps Atratus), Kristen L. Morris

Thesis Projects

Feather plucking (FP) is a maladaptive behavior observed in captive avian species. This self-injurious behavior results in damage to and removal of feathers and skin tissue, resulting in animal welfare and financial consequences. The etiology and maintenance of FP have been hypothesized through medical and environmental processes, yet a definitive solution has not been found. The current study investigated the environmental variables maintaining the FP of a Black Vulture (Coragyps atratus), as well as evaluated a function-based treatment for this behavior. The behavior was found to be maintained by positive reinforcement in the form of contingent attention. Treatment …

Anti-Predator Behavior And Discriminative Abilities: Playback Experiments With Free-Ranging Equatorial Saki Monkeys (Pithecia Aequatorialis) In The Peruvian Amazon, Candace Stenzel

Graduate Theses

Anti-predator behaviors of free-ranging groups of equatorial saki monkeys (Pithecia aequatorialis) were recorded in the Área de Conservación Regional Comunal Tamshiyacu Tahuayo in the Peruvian Amazon to determine whether individuals responded in predator-specific ways to calls of aerial and terrestrial predators. Previous studies have shown that several species of Old World monkeys possess these discriminative abilities, but few have explored this question in New World monkeys. The ability to recognize predators and to respond appropriately is important for survival. Thus, we predicted that equatorial saki monkeys should respond in predator-specific ways, both vocally and behaviorally, to aerial and terrestrial predators. …

Time-Activity And Energy Budgets Of Eared Grebes (Podiceps Nigricollis) At Salton Sea, Samantha San Francisco

Theses

Time-activity budgets have been a widely accepted way of approximating the daily energy expenditure of many species, including waterbirds. For this study, focal animal sampling was used to study Eared Grebes (Podiceps nigricollis) at their post-wintering stopover site, Salton Sea. Daylight time-activity budgets were converted to energy budgets using energy equivalents for diving, preening, swimming, and resting on water developed for Eared Grebes previously by H. I. Ellis (1994). Post-wintering Eared Grebes arrive at Salton Sea in waves at differing times in the spring. As a result, there can be individuals in a variety of physiological states during …

Do Pinnipeds Have Personality? Coding Harbor Seal (Phoca Vitulina) And California Sea Lion (Zalophus Californianus) Behavior Across Contexts, Amber J. De Vere

Master's Theses

Personality has now been studied in species as diverse as chimpanzees (King & Figueredo, 1997) and cuttlefish (Carere et al., 2015), but marine mammals remain vastly underrepresented in this area. A broad range of traits have been assessed only in the bottlenose dolphin (Highfilll & Kuczaj, 2007), while consistent individual differences in a few specific behaviors have been identified in grey seals (Robinson et al., 2015; Twiss & Franklin, 2010; Twiss, Culloch & Pomeroy, 2011; Twiss, Cairns, Culloch, Richards & Pomeroy, 2012). Furthermore, the context component of definitions of personality is not often assessed, despite evidence that animals may show …

Sparking A Dolphin's Curiosity: Individual Differences In Dolphins' Reactions To Surprising And Expectation-Violating Events, Malin Katarina Lilley

Master's Theses

Non-scientific literature consistently describes dolphins as “curious animals,” but there has been little systematic research on curiosity in dolphins. Curiosity in humans and certain non-human animal species, including birds and non-human primates, has been studied by examining individual differences in exploration and reactions to novel stimuli. Additionally, research has explored how human infants and non-human animals react when an event violates their expectations. The present study explored dolphins’ reactions to spontaneously surprising and expectation-violating stimuli. The reactions of dolphins, 15 bottlenose (Tursiops truncatus) and 6 rough-toothed (Steno bredanensis), at Gulf World Marine Park were analyzed in …