Life Sciences Commons^™

Taxonomic Review Of South American Butter Frogs: Phylogeny, Geographic Patterns, And Species Delimitation In The Leptodactylus Latrans Species Group (Anura: Leptodactylidae), Felipe De M. Magalhães, Mariana L. Lyra, Thiago R. De Carvalho, Diego Baldo, Francisco Brusquetti, Pamela Burella, Guarino R. Colli, Marcelo C. Gehara, Rafael O. De Sá, Et Al.

Biology Faculty Publications

The Leptodactylus latrans species group currently comprises eight medium- to large-sized frog species with a convoluted taxonomic history, particularly related to the specific limits of the L. latrans complex, and the species pair Leptodactylus chaquensis–Leptodactylus macrosternum. Their homogeneous external morphology and continental geographic distribution in South America have posed severe limitations to a comprehensive review, such that taxonomic consensus and species limits remain uncertain. This is further worsened by the presence of chromatic polymorphism among coexisting species that can hardly be distinguished by external morphology. Based on a large-scale geographic sampling including multilocus DNA analyses, and acoustic …

Foraging Strategy Plasticity In Fiordland Penguins (Eudyptes Pachyrhynchus): A Stable Isotope Approach, Jeffrey Wayne White

Theses, Dissertations and Capstones

Foraging ecology in the crested penguins (genus: Eudyptes) is an active area of research, with new techniques rapidly increasing our understanding of these charismatic species. The most common techniques to assess foraging ecology include stomach content analysis, fecal DNA analysis, stable isotope analysis, tracking, and video loggers. Here we review dietary research on all 8 taxa within the genus Eudyptes to identify gaps in our current knowledge. However, foraging studies that assess dietary segregation require a method for quickly and accurately sexing penguins in the field. Obvious sexual dimorphism in plumage is largely absent in penguins leaving behavioral cues …

The Effects Of Ship Wakes In The Venice Lagoon And Implications For The Sustainability Of Shipping In Coastal Waters, Gian Marco Scarpa, Luca Zaggia, Giorgia Manfe, Giuliano Lorenzetti, Kevin E. Parnell, Tarmo Soomere, John Rapaglia, Emanuela Molinaroli

Biology Faculty Publications

We analyse the impact of ship traffic in the vicinity of navigation channels in a wide shallow waterbody. The crucial hydrodynamic driver in this situation is the depression (Bernoulli) wake that may be transferred into a long-living solitary wave of depression over the shoals. The analysis considers navigation channels in the Venice Lagoon using a new large dataset of approximately 600 measured wake events associated to specific ships whose data are provided by the AIS system. Since the development of the modern industrial port and the opening of the Malamocco–Marghera channel in the late 1960s, growing pressure on the lagoon …

The Neotropical Variegated Squirrel, Sciurus Variegatoides (Rodentia: Sciuridae) In Nicaragua, With The Description Of A New Subspecies, Hugh H. Genoways, Robert M. Timm

University of Nebraska State Museum: Mammalogy Papers

The Neotropical variegated squirrel, Sciurus variegatoides, is represented in Nicaragua by five known subspecies—adolphei, belti, boothiae, dorsalis, and underwoodi. Analyses of morphometrics, color, and color patterns of 394 specimens from throughout the country and all available literature support the retention of these subspecies, but also reveal the presence of a sixth population of these squirrels, which is worthy of description and recognition as a new subspecies. This new subspecies is confined to Isla de Ometepe in Lago de Nicaragua. Variegated squirrels on Ometepe are on average the smallest variegated squirrels in the country …

Do Enallagma Exsulans From Streams And Lakes Show Patterns Of Divergence?, Savannah Rae Graham

Graduate Theses and Dissertations

Divergent selection across heterogenous environments could lead to adaptive divergence in populations resulting in potential local adaption. These populations have phenotypic differences that are fitness related and make native individuals more fit than non-native individuals. My research focuses on a species of damselfly, Enallagma exsulans, to explore local adaptation and morphological differences as a result of divergent selection or plasticity. My first study explored potential local adaptation of wild caught stream and lake E. exsulans using a reciprocal transplant design, a classic approach for this objective. The stream and lake sites chosen were on a small spatial scale allowing for …

Presence And Distribution Of Leptodactylus Guianensis Heyer And De Sa, 2011 In Colombia: Comparisons With Other Species In The L. Latrans Group., Mariela Osorno Muñoz, Doris L. Gutiérrez-Lamus, Rafael O. De Sá

Biology Faculty Publications

Leptodactylus guianensis is reported for the first time for Colombia along with a distributional map of the species. The species is the fifth species of the L. latransspecies group documented in the country. Males possess a single, conical and slightly chisel-shaped thumb spine; only three species in the group have a single thumb spine. In collections, specimens of L. guianensis are misidentified as L. macrosternum, L. latrans or L. bolivianus. We provide morphological, colouration and habitat descriptions for where the species occurs in Colombia.

Multiple Connections Between Amazonia And Atlantic Forest Shaped The T Phylogenetic And Morphological Diversity Of Chiasmocleis Mehely, 1904 (Anura: Microhylidae: Gastrophryninae), Rafael O. De Sá, João Filipe Riva Tonini, Hannah Van Huss, Alex Long, Travis Cuddy, Mauricio C. Forlani, Pedro L.V. Peloso, Hussam Zaher, Célio F.B. Haddad

Biology Faculty Publications

Chiasmocleis is the most species-rich genus of Neotropical microhylids. Herein, we provide the first comprehensive multilocus phylogeny for the genus, including all but 3 of the 34 recognized species and multiple individuals per species. We discuss cryptic speciation, species discovery, patterns of morphological evolution, and provide a historical biogeographic analysis to account for the current distribution of the genus. Diversification of Chiasmocleis from other New World microhylids began during the Eocene, app. 40 mya, in forested areas, and current diversity seems to be a product of recurrent connections between the Atlantic Forest and Amazonia. Small-sized species evolved independently three times …

Effects Of Manual And Mechanical Ammophila Arenaria Removal Techniques On Coastal Dune Plant Communities And Dune Morphology, Monique R. Silva Crossman

Cal Poly Humboldt theses and projects

The removal of invasive species as part of the restoration process can allow natives organisms to rebound. An ecosystem that incurs damages from invasive species is coastal sand dunes, which are dynamic systems. Some coastal sand dunes on the west coast of the United States have been invaded by Ammophila arenaria. The invasive grass, A. arenaria, is thought to alter and stabilize foredune morphology and reduce populations of native species. The objectives of my research are to examine the effects that manual and mechanical A. arenaria removal techniques have on coastal sand dune morphology and vegetative cover over time. …

Ecological Importance Of Invader Source Population And Disturbance In Aquatic Invasions, Nicole Elizabeth Graham

Graduate Theses and Dissertations

Invasive species are a global problem and their effects on recipient ecosystems may be mediated by disturbance and intraspecific variation. Crayfish can substantially influence stream structure and function, and invasive crayfish often have differential impacts than native crayfish in aquatic ecosystems. Since species traits often vary across a distribution, it is possible that invasive crayfish from different source populations may have distinct impacts on recipient ecosystem structure and function. In the Ozark Highlands of Arkansas and Missouri, USA, invasive O. neglectus (the Ringed Crayfish) may be leading to the displacement of native O. eupunctus (the Coldwater Crayfish). The objective of …

Comparison Of Cytochrome B Variation And Morphological Features Of Isolated Banded Pygmy Sunfish (Elassoma Zonatum) Populations In The Lower Green River And Coastal Plain Systems In Western Kentucky, David Cravens

Online Theses and Dissertations

The banded pygmy sunfish Elassoma zonatum is a wide-ranging species found throughout the Southeastern Coastal Plain of North America. In Kentucky, the populations are found above and below the inner boundary of the Coastal Plain. Due to their geographical separation comparisons in body size and morphological features along with genetic comparisons using mitochondrial cytochrome-b (Cyt-b) were conducted to test relationships between populations. Two sites, Cypress Creek in the Lower Green River system and Rose Creek in the Tradewater River drainage, were sampled from above the inner boundary and two additional sites, Bayou de Chien and Running Slough in the Mississippi …

Microhabitat Use Affects Brain Size And Structure In Intertidal Gobies, Gemma E. White, Culum Brown

Culum Brown, PhD

The ecological cognition hypothesis poses that the brains and behaviours of individuals are largely shaped by the environments in which they live and the associated challenges they must overcome during their lives. Here we examine the effect of environmental complexity on relative brain size in 4 species of intertidal gobies from differing habitats. Two species were rock pool specialists that lived on spatially complex rocky shores, while the remainder lived on dynamic, but structurally simple, sandy shores. We found that rock pool-dwelling species had relatively larger brains and telencephalons in particular, while sand-dwelling species had a larger optic tectum and …

The Role Of Hydrologic Regimes In Driving Morphologic Divergence And The Trait Compositions Of Fish Assemblages, Lindsey A. Bruckerhoff

Graduate Theses and Dissertations

The hydrologic regime is an important determinant of the ecological integrity of a stream. Hydrologic regimes are defined by the magnitude, timing, frequency, rate of change, and duration of high and low flow events and capture long term patterns of variability and predictability of water movement in a stream. Flow regimes influence many aspects of the biophysical environment in lotic systems; therefore organisms have adapted to natural flow patterns. We investigated how fish have adapted to flow regimes at both a population and community level. In the first study presented in this thesis, we hypothesized fish exhibit phenotypic divergence to …

Evolution, Systematics & Geographic Parthenogenesis Of Ilyodromus (Crustacea, Ostracoda), Rylan James Shearn

Theses

Most multicellular organisms reproduce sexually at some point in their life cycle. This is paradoxical because being asexual is theoretically far more advantageous. Asexual organisms do not need to find and court new mates, they reproduce at a faster rate, and with no males, all members of the population contribute toward population growth rate. With over 20, often mutually exclusive hypotheses, this paradox resists a synthesised explanation, and continues to represent one of the largest gaps in our understanding of fundamental evolutionary theory. Clearly, more real world studies are required that document the selective mechanisms underlying differences in evolutionary fitness …

Systematics Of The Neotropical Genus Leptodactylus Fitzinger, 1826 (Anura: Leptodactylidae): Phylogeny, The Relevance Of Non-Molecular Evidence, And Species Accounts, Rafael O. De Sá, Taran Grant, Arley Camargo, W. R. Heyer, María Laura Ponssa, Edward Stanley

Biology Faculty Publications

A phylogeny of the species-rich clade of the Neotropical frog genus Leptodactylus sensu stricto is presented on the basis of a total evidence analysis of molecular (mitochondrial and nuclear markers) and non-molecular (adult and larval morphological and behavioral characters) sampled from > 80% of the 75 currently recognized species. Our results support the monophyly of Leptodactylus sensu stricto, with Hydrolaetare placed as its sister group. The reciprocal monophyly of Hydrolaetare and Leptodactylus sensu stricto does not require that we consider Hydrolaetare as either a subgenus or synonym of Leptodactylus sensu lato. We recognize Leptodactylus sensu stricto, Hydrolaetare, Adenomera, and Lithodytes …

Differential Jumping Performance In Newly Metamorphosed Blanchard's Cricket Frogs, Acris Blanchardi (Anura: Hylidae), From Fish- And Invertebrate-Dominated Ponds, Taylor L. Hall, Daniel Saenz, Matthew Kwiatkowski

Faculty Publications

Organisms that adopt phenotypically plastic anti-predator strategies during larval stages may incur fitness costs later in development. These costs are typically difficult to define in many species. The difficulty of identifying ecological trade-offs may result from experimental comparisons that do not adequately mirror naturally occurring predator-prey relatioships. To examine this, we captured 61 newly metamorphosed Acris blanchardi from ponds dominated either by fish or invertebrate predators. These predators are known to induce alternate phenotypic anti-predator responses at the larval stage. We use jumping performance as a measure of post-metamorphic fitness, and compared the morphological traits and jumping ability of frogs …

Metapopulation Theory Explains Black-Stripe Minnow (Pisces: Galaxiidae, Galaxiella Nigrostriata) Distribution In Seasonal Wetlands In South-West Western Australia, David M. Galeotti

Theses: Doctorates and Masters

The objective of this project was to determine if Galaxiella nigrostriata populations could belong to a metapopulation. Metapopulation theory describes how multiple populations with occasional connectivity are a ‘population of populations’. Some populations’ habitats have optimal conditions (source habitats), others experience regular extinctions (sink habitats). Connectivity allows repopulation of extinct or uninhabited habitats. Galaxiella nigrostriata occurred randomly in 11 seasonal wetlands in the Kemerton wetland complex in south-west Western Australia over a 16 year period. The wetlands did not appear to be connected.

Around 70% of wetlands on the Swan Coastal Plain in south-west WA have been filled or degraded …

Phenotypic Plasticity Of Rattlesnake Trophic Morphology, Matthew Thomas Smith

Graduate Theses and Dissertations

The trophic morphology of gape-limited predators constrains the shape and size of prey items they can ingest. Trophic morphology consists of any morphological feature that is involved in the handling and ingestion of food. Diet has a profound effect on the morphology of many gape-limited predators. Identifying how prey type and resource level affect the morphology of different populations is an essential step in understanding the mechanisms contributing to patterns of morphological diversity. Species interactions (Chapter 1) induce plasticity in morphology that can lead to increased fitness, morphological divergence, and eventually speciation.

In Chapter 2, a laboratory study tested the …

Phenotypic Plasticity Of Oral Jaw Dentition In Archosargus Probatocephalus, Cynthia E. Worcester

Masters Theses & Specialist Projects

Phenotypic plasticity, the capacity of a single genotype to exhibit variable phenotypes in different environments, is common in many species. A sample of wild caught Archosargus probatocephalus, also known as sheepshead, from Florida was randomly divided into two treatment groups: one group was fed soft prey, Mercenaria sp. muscle tissue, and the other group was fed hard prey, Mercenaria sp. in the shell, for 365 days. It was hypothesized that the sheepshead fed hard prey would have a thicker tooth enamel layer containing more calcium, and therefore be stronger than the tooth enamel layer of those fed soft prey …

Strike Mechanics Of An Ambush Predator: The Spearing Mantis Shrimp, M. Devries, E. Murphy, S. Patek

Faculty Publications, Biological Sciences

Ambush predation is characterized by an animal scanning the environment from a concealed position and then rapidly executing a surprise attack. Mantis shrimp (Stomatopoda) consist of both ambush predators (‘spearers’) and foragers (‘smashers’). Spearers hide in sandy burrows and capture evasive prey, whereas smashers search for prey away from their burrows and typically hammer hard-shelled, sedentary prey. Here, we examined the kinematics, morphology and field behavior of spearing mantis shrimp and compared them with previously studied smashers. Using two species with dramatically different adult sizes, we found that strikes produced by the diminutive species, Alachosquilla vicina, were faster (mean peak …

Beitrag Zur Säugetierfauna Des Staatlichen Naturschutzgebietes Azas In Tyva/Südsibirien = Contributions To Fauna And Ecology Of Small Mammals Of State Nature Reserve “Azas” In The Republic Of Tyva /South Siberia, Annegret Stubbe, Michael Stubbe, V. V. Unžakov, A. P. Saveljev, N. I. Putincev, W. Stubbe

Erforschung biologischer Ressourcen der Mongolei / Exploration into the Biological Resources of Mongolia, ISSN 0440-1298

During 1988-2004 Russian and German biologists carried out a research of biodiversity of the mountain taiga within the territory of State Nature Reserve “Azas” (Republic of Tyva/Russia). Along with executing the main task – studying and development of an aboriginal population of Tuvinian beavers Castor fiber tuvinicus – materials on the fauna of small mammals of the Todzha kettle were collected. On the basis of samples (about 550 collected micromammals) information on the occurrence, reproduction and morphometric characteristics of four species of Insectivora, six species of Chiroptera and eleven species of small Rodentia inhabiting the territory of the reserve “Azas” …

Assessment Of The Endangered Species Podarcis Carbonelli On A Microgeographic Scale: A Molecular, Morphological And Physiological Approach, Maria Clara Figueirinhas Do Amaral

Masters Theses & Specialist Projects

The lizard Podarcis carbonelli is an endangered species endemic to the Iberian Peninsula. One location where this species occurs is at the Berlengas Natural Preserve, an Atlantic archipelago off the coast of Portugal. These island populations are geographically separated from nearby mainland populations. The fundamental question is, are these insular individuals distinct from the mainland populations? Four localities were chose for comparison: two island populations and two nearby coastal populations. We assessed this question using three distinct approaches: molecular, morphological and physiological approach. We sequenced the 12S RNA, the mtDNA Control Region and the 7th intron of the !-fibrinogen gene …

Mating Systems, Copulatory Organ Size, And Scaling Relationship In Mollies (Poecilia Spp.), Martha Divver, Eric T. Schultz

EEB Articles

Copulatory organs rapidly evolve and are subject to complex selective pressures affecting mating success. One feature of copulatory organs that is subject to such selective pressures is size. Benefits of longer organs may include greater signal effectiveness in courtship and longer ‘reach’ when attempting copulations with evasive females. Costs of longer organs may include impaired locomotion, increased energetic cost or reduced mechanical compatibility with female genitalia. The optimal size for a copulatory organ may vary with mating behavior. The objective of this study is to examine among-species variability in copulatory organ size, body size and the relationship between copulatory organ …

Body Mass Index (Bmi) Of Normal Sandhill Cranes, Stephen A. Nesbitt, Marilyn G. Spalding, Kristen L. Candelora, Paul S. Kubilis, Stephen T. Schwikert

Proceedings of the North American Crane Workshop

We used linear and mass measurements to construct a body mass index (BMI) for 2 subspecies of sandhill cranes (Grus canadensis). We found that BMI declined during the spring and early summer period. We used the BMI to show that juvenile Florida sandhill cranes (G. c. pratensis) reach their full mass at about 270 days of age, near the age at which they begin to leave the company of their parents. We used mensural data to predict a minimum expected mass for normal sandhill cranes which could be then used to evaluate the relative health of …

The Tadpole Of Eupsophus Queulensis (Anura, Cycloramphidae), Diana R. Cárdenas-Rojas, Alberto Veloso, Rafael O. De Sá

Biology Faculty Publications

The genus Eupsophus is characterized by endotrophic larvae that inhabit water-filled cavities. The larvae feed from large yolk reserves during metamorphosis. The external morphology has been described for four of the ten known species and data on larval chondrocranial morphology are available only for one. We describe the extema1 morphology, oral disc and chondrocranial anatomy of the larvae of Eupsophus queulensis. The characteristics of E. queulensis tadpoles are compared with those of other Eupsophus larvae.

A Fresh Look At The Taxonomy Of Midcontinental Sandhill Cranes, Douglas H. Johnson, Jane E. Autin, Jill A. Shaffer

Proceedings of the North American Crane Workshop

The midcontinental population of sandhill crane (Grus canadensis) includes about 500,000 birds and provides valuable recreational crane-watching and hunting opportunities in Canada and the United States. It comprises three subspecies, one of which (G. c. rowani) was of uncertain taxonomic status and another of which (G. c. tabida) merited protection from excessive harvest due to its small population size. We obtained measurements of cranes used by Johnson and Stewart (1973) and additional crane specimens to 1) evaluate the subspecies designation of midcontinental sandhill cranes and 2) to seek improved methods for classifying cranes from …

Description Of The Tadpoles Of Gastrophryne Pictiventris And Nelsonophryne Aterrima (Anura: Microhylidae), With A Review Of Morphological Variation In Free-Swimming Microhylid Larvae, Maureen A. Donnelly, Rafael O. De Sá, Craig Guyer

Biology Faculty Publications

The tadpoles of Gastrophryne pictiventris and Nelsonophryne aterrima are described based on material collected in Costa Rica and Panama, respectively. The tadpole of G. pictiventris resembles those of the other species of Gastrophryne. The tadpole of N. aterrima differs from other New World microhylid tadpoles in location of the vent tube (medial), the spiracular opening (ventral to the gut), and eyes (dorsolateral). The unique configuration of mouthparts in N. aterrima is described. Morphological variation in microhylid tadpoles is reviewed and six larval characters are analyzed cladistically for IO New World microhylid genera.

Estructura Del Ovario De Chthonerpeton Indistinctum (Reinhardt Y Lutken, 1862) (Amphibia: Gymnophiona) Durante La Gestación, Rafael O. De Sá, Nibia Berois

Biology Faculty Publications

La morfología e histología del ovario para varias especies del orden Gymnophiona ha sido reportada por Wake (1968, J. Morphol. 126, 291) y para C. indistinctum por los autores (1984, XXIV Reunión de Comunicaciones, Soc. Zool. Uruguay).

Continuando con los estudios sobre el aparato genital de esta especie vivípara, se presenta ahora la estructura del ovario durante la gestación.

Se procesaron con fines histológicos, ovarios de dos hembras grávidas colectadas en las costas de los Dep. Montevideo y San José en abril, 1983. El número de ejemplares trabajados es muy reducido dado lo difícil que resulta su colecta …