Life Sciences Commons^™

Diversity And Drivers Of Oribatid Mites (Acari: Oribatida) In Boreal Peatlands, Carlos Rafael De Araujo Barreto

Electronic Thesis and Dissertation Repository

Boreal peatlands are important ecosystems for carbon cycling, storing 1/3 of the world’s terrestrial carbon in only ~3% of the globe, making them a key component of potential mitigation strategies in response to global climate warming. Experiments have shown that warming can affect plant and microbial communities in ways that potentially shift peatlands from carbon sinks to sources. Soil food webs, including the microarthropod community, are key in carbon cycling but are relatively understudied both in peatlands and under experimental warming. My research capitalized on a large-scale experimental field manipulation of warming in two contrasting peatland sites in Northern Ontario, …

Satellite-Detected Ammonia Changes In The United States: Natural Or Anthropogenic Impacts, Yaqian He, Rongting Xu, Stephen A. Prior, Di Yang, Anni Yang, Jian Chen

USDA Wildlife Services: Staff Publications

Ammonia (NH3) is the most abundant alkaline component and can react with atmospheric acidic species to form aerosols that can lead to numerous environmental and health issues. Increasing atmospheric NH3 over agricultural regions in the US has been documented. However, spatiotemporal changes of NH3 concentrations over the entire US are still not thoroughly understood, and the factors that drive these changes remain unknown. Herein, we applied the Atmospheric Infrared Sounder (AIRS) monthly NH3 dataset to explore spatiotemporal changes in atmospheric NH3 and the empirical relationships with synthetic N fertilizer application, livestock manure production, and climate factors across the entire US …

Empowering Hope-Based Climate Change Communication Techniques For The Gulf Of Maine, Aimee Bonanno, Megan Ennes, Jennifer A. Hoey, Emily Moberg, Sarah-Mae Nelson, Nette Pletcher, Richelle L. Tanner

Biology, Chemistry, and Environmental Sciences Faculty Articles and Research

The Gulf of Maine is one of the fastest warming marine areas on the planet: The industries and creatures that call it home face an unprecedented shift in their interactions and existence. Scientists, policy makers, and practitioners often want to communicate to the public about the seriousness of the situation to encourage mitigation and adaptation. Many standard communication strategies that rely on fear and scientific authority alone—rather than comprehensive explanations that include solutions—can leave audiences feeling overwhelmed and disengaged, instead of hopeful and motivated to act. In this practice bridge, we showcase a social science research-based climate change communication “tool-kit” …

Vignette 12: The Blob, Nicholas Bond

Institute Publications

A marine heat wave of unprecedented severity, areal extent and duration occurred in the Northeast Pacific Ocean during 2014-2016. This event, known as the “Blob,” had a wide variety of far- ranging effects on physical, chemical, and biological ocean properties. Because the Blob was such a massive perturbation, it represents an attractively large signal for inquiry in the Salish Sea. It represents a dress rehearsal for typical conditions in future decades due to global climate change.

Vignette 20: Fraser River Estuary In Need Of Urgent Intensive Care, Laura Kehoe, Tara G. Martin

Institute Publications

The Fraser River is the lifeline of the Salish Sea, influencing its stratification, circulation, and primary productivity. If we do not take strong action to conserve the Fraser River estuary, two-thirds of the species at risk in this region are predicted to have a less than 50% chance of survival. Many of the region's most iconic species could disappear. Conservation action combined with environmental governance is a pathway for a brighter future for the Fraser River and other highly contested regions.

Climate-Driven Impacts On Himalayan Aquatic Biodiversity: A Case Study Involving Snowtrout (Cyprinidae: Schizothorax), Riri Wiyanti Retnaningtyas

Graduate Theses and Dissertations

Monitoring biodiversity, to include its relative dispersal and contraction, has become a conservation task of great importance, particularly given the catastrophic and ongoing loss of habitat due to climate change. However, the timing, direction, and magnitude of these rates vary across taxa and ecosystems. Predicting specific impacts of climate change can thus be difficult and this, in turn, hampers management action. Metrics are needed to not only quantify contemporary requirements of species, but also predict potential distributions that fluctuate in lockstep with climate.

Montane ecosystems in the Himalayas are highly impacted by climate change, yet remain largely understudied due to …

State Of The Salish Sea: Executive Summary, Kathryn L. Sobocinski

Institute Publications

This report synthesizes information on past, current, and emerging stressors within the Salish Sea estuarine ecosystem. The Salish Sea is a complex waterbody shared by Coast Salish Tribes and First Nations, Canada, and the United States. It is defined by multiple freshwater inputs and marine water from the Pacific Ocean that mix in two primary basins, Puget Sound and the Strait of Georgia. Human impacts are multifaceted and extensive within the Salish Sea, with a regional population of almost 9 million people. Population growth has driven urbanization and development, which in turn has triggered structural changes to the landscape and …

Vignette 02: Lower Trophic Levels In The Salish Sea, Ian Perry

Institute Publications

Plankton form the base of the pelagic marine food web in the Salish Sea, and are eaten by fishes, marine mammals, and seabirds. Plankton include microscopic plants (phytoplankton) and very small animals (zooplankton). This vignette presents an overview of monitoring observations of phytoplankton and zooplankton distribution and biomass in the Strait of Georgia. Climate change may lead to unusual and unexpected patterns of phytoplankton and zooplankton in the future.

Vignette 23: Indigenous Management Systems Can Promote More Sustainable Salmon Fisheries In The Salish Sea, William I. Atlas, Natalie C. Ban, Jonathan W. Moore, Adrian M. Tuohy, Spencer Greening, Andrea J. Reid, Nicole Morven, Elroy White, William G. Housty, Jess A. Housty, Christina N. Service, Larry Greba, Sam Harrison, Katherine Ir Butts, Elissa Sweeney-Bergen, Donna Macintyre, Matthew R. Sloat, Katrina Connors

Institute Publications

Indigenous peoples of the Northern Pacific Rim have harvested salmon for more than 10,000 years, and Pacific salmon (Oncorhynchus spp.) form the foundation of social-ecological systems encompassing communities from California to Kamchatka and Northern Japan. Through continuous placed-based interdependence with salmon, Indigenous societies formed deliberate and well-honed systems of salmon management. These systems promoted the sustained productivity of salmon fisheries. In Canada and the United States, Indigenous sovereignty and resource stewardship were forcibly disrupted by colonial government authority. Despite the destructive impacts of colonization, Indigenous culture and knowledge are resurgent in Canada and the United States. Indigenous fishing technologies and …

Vignette 21: How Ecological Time-Series Inform Response To Stressors, Jackson W.F. Chu

Institute Publications

An important part of biodiversity monitoring includes assessing the differences in vulnerability across parts of an ecosystem. Hypoxia is one of the big three climate- related stressors causing biodiversity loss in the oceans. As the ocean warms, its capacity to hold oxygen becomes reduced. At the same time, concurrent shifts in circulation result in changes to how oxygen gets transported from the surface (where oxygen dissolves into the ocean) to the seafloor and from offshore to inshore areas. When a habitat experiences a substantial drop in oxygen, below the point needed to sustain everyday life, animals respond by migrating away, …

Vignette 17: Salish Sea Jellyfish, Correigh Greene

Institute Publications

The Salish Sea is home to a diverse community of gelatinous zooplankton (or "jellies"). In their adult forms, jellies comprise a relatively large proportion of biomass in the Salish Sea. Questions regarding jellyfish abundance and climate variation in the Salish Sea have been difficult to address, in part because of a lack of consistent monitoring. Research presented in this vignette suggests that jellyfish are sensitive to climate signals like marine water temperatures, but do not appear to be systematically increasing in abundance over time. Due to advances in modeling, we may gain a better perspective on the roles jellies play …

Vignette 08: Connection To Place: Indigenous Leadership In Səlilwət (Burrard Inlet), Tsleil-Waututh Nation’S Treaty Lands And Resources Department

Institute Publications

Since time out of mind, Tsleil-Waututh have used and occupied Burrard Inlet and surrounding watersheds. Generations of Tsleil-Waututh people were brought up with the teaching, “When the tide went out, the table was set.” About 90% of our diet was once derived from Burrard Inlet and the Fraser River, but today the Inlet is unable to support our needs. Cumulative effects of colonial settlement and development have eroded the ecological health, integrity, and diversity of the Inlet. Tsleil-Waututh Nation (TWN) has a goal to restore the health of the Inlet so that we, and future generations of Tsleil-Waututh People, can …

Vignette 04: Olympia Oysters, Jodie Toft, Betsy Peabody

Institute Publications

Olympia oysters (Ostrea lurida) are our only native oyster species here in the Salish Sea. Olympia oysters once covered an estimated 13-26% of the intertidal area in Puget Sound, mostly near the heads of inlets. A combination of overharvest, pollution, and habitat loss reduced the current population to less than 4% of historic numbers, though sparse numbers of Olympia oysters can still be found throughout most of their historic distribution. Looking to the future, as our region’s marine waters experience effects of climate change and ocean acidification (OA), native species such as the Olympia oyster may prove to …

Vignette 14: Eelgrass Wasting Disease, Olivia Graham, Morgan Eisenlord, Drew Harvell

Institute Publications

Rising seawater temperatures can increase the risk of disease outbreaks in many taxa. Pathogens are potentially the ultimate keystone species in that their small biomass can have massive impacts that ripple through ecosystems. Disease outbreaks can be particularly damaging when they affect ecosystem engineers, such as seagrasses. Outbreaks of wasting disease in seagrasses are one of a myriad of stressors associated with declining temperate and tropical seagrass meadows around the globe. Levels of eelgrass wasting disease are high in the San Juan Islands and Puget Sound. These increasing levels of disease are a threat to sustainability of eelgrass meadows, our …

Vignette 13: The Salish Sea Model, Tarang Khangaonkar P.E.

Institute Publications

Given numerous concerns related to the health of the ecosystem and the possibility of anthropogenic impacts—from population growth to climate impacts, such as sea level rise—scientists, engineers, and planners seek an improved basic understanding of the biophysical behavior of the Salish Sea. The Salish Sea Model (SSM) development was motivated by this urgent need for a comprehensive predictive model that could diagnose water quality issues and concerns and serve as a planning tool in support of Puget Sound restoration efforts. The SSM was developed by the Pacific Northwest National Laboratory in collaboration with the Washington State Department of Ecology (Ecology) …

Section 1: Introduction, Kathryn L. Sobocinski

Institute Publications

Section 1 is an introduction to the report and the Salish Sea as a whole. The introduction provides an overview of the Salish Sea, the concept of "ecosystem health," and a roadmap to the rest of the report.

Section 4: Climate Change: A Global Problem With Local Impacts, Kathryn L. Sobocinski

Institute Publications

Section 4 shifts from the local impacts of urbanization to the locally realized impacts of global climate change, including ocean acidification and sea level rise, followed by evidence of climate change in the ecosystem, ranging from phytoplankton and kelp, to wetlands, salmon, and marine birds.

Section 3: Urbanization And Human Impacts To The Seascape, Kathryn L. Sobocinski

Institute Publications

Section 3 turns to an in-depth discussion of stressors and impacts to the ecosystem from population growth and urbanization, such as increases in impervious surfaces, hardening of shorelines, and the problems caused by a myriad of marine contaminants.

Section 2: Context, Kathryn L. Sobocinski

Institute Publications

Section 2 sets a foundation for understanding the Salish Sea ecosystem by describing its fundamental biophysical processes and structure, including estuarine circulation, ecological productivity, and an overview of several important biogenic habitats.

Section 6: Opportunities For Improving Assessment And Understanding Of The Salish Sea, Kathryn L. Sobocinski

Institute Publications

Section 6 offers a list of science-based needs and opportunities brought to light by the report and various existing efforts within the Salish Sea science community, representing opportunities for greater collaboration across geographic and jurisdictional boundaries.

Section 5: Cumulative Ecosystem Effects, Kathryn L. Sobocinski, Jennifer Boldt, Todd Sandell, Jaclyn Cleary, Michael Schmidt, Isobel Pearsall, Iris Kemp, Brian Riddell, Lynda V. Mapes

Institute Publications

Section 5 introduces cumulative effects and brings in brief case discussions focused on herring, salmon, and orcas. Understanding the layers of stressors the ecosystem faces is integral to gaining a full picture of declines in ecosystem function.

Vignette 15: Eelgrass Variations Ties To Sea Level Variations, Ronald Thom

Institute Publications

This vignette shares an overview of the process and results of a long-term eelgrass monitoring effort at the mouth of Sequim Bay. Coupling these local long-term findings with research and monitoring across the Salish Sea and the globe will help better understand the longer-term effects of global warming and perhaps other human and natural-derived pressures on coastal ecosystems, and provide clues on how to make these systems more resilient to pressures.

The State Of The Salish Sea, Kathryn L. Sobocinski

Institute Publications

This report synthesizes information on past, current, and emerging stressors within the Salish Sea estuarine ecosystem. The Salish Sea is a complex waterbody shared by Coast Salish Tribes and First Nations, Canada, and the United States. It is defined by multiple freshwater inputs and marine water from the Pacific Ocean that mix in two primary basins, Puget Sound and the Strait of Georgia. Human impacts are multifaceted and extensive within the Salish Sea, with a regional population of almost 9 million people. Population growth has driven urbanization and development, which in turn has triggered structural changes to the landscape and …

Global Connectivity Of Southern Ocean Ecosystems, Eugene J. Murphy, Nadine M. Johnston, Eileen E. Hofmann, Richard A. Phillips, Jennifer A. Jackson, Andrew J. Constable, Sian F. Henley, Jessica Melbourne-Thomas, Rowan Trebilco, Rachel D. Cavanagh, Geraint A. Tarling, Ryan A. Saunders, David K.A. Barnes, Daniel P. Costa, Stuart P. Corney, Ceridwen I. Fraser, Juan Höfer, Kevin A. Hughes, Chester J. Sands, Sally E. Thorpe, Philip N. Trathan, José C. Xavier

CCPO Publications

Southern Ocean ecosystems are globally important. Processes in the Antarctic atmosphere, cryosphere, and the Southern Ocean directly influence global atmospheric and oceanic systems. Southern Ocean biogeochemistry has also been shown to have global importance. In contrast, ocean ecological processes are often seen as largely separate from the rest of the global system. In this paper, we consider the degree of ecological connectivity at different trophic levels, linking Southern Ocean ecosystems with the global ocean, and their importance not only for the regional ecosystem but also the wider Earth system. We also consider the human system connections, including the role of …

Population-Specific Resilience Of Halophila Ovalis Seagrass Habitat To Unseasonal Rainfall, An Extreme Climate Event In Estuaries, Chanelle L. Webster, Kieryn L. Kilminster, Marta Sánchez Alarcón, Katherine Bennett, Simone Strydom, Sian Mcnamara, Paul S. Lavery, Kathryn M. Mcmahon

Research outputs 2014 to 2021

1. Extreme climate events are predicted to alter estuarine salinity gradients exposing habitat-forming species to more frequent salinity variations. The intensity and duration of these variations, rather than the mean salinity values ecosystems are exposed to, may be more important in influencing resilience but requires further investigation.
2. Precipitation, including the frequency, intensity and timing of occurrence, is shifting due to climate change. A global analysis on the timing of rainfall in estuarine catchments was conducted. In 80% of the case studies, the maximum daily rainfall occurred in the dry season at least once over the 40-year period and could be classified …

Metagenomic Identification And Classification Of The Mercury-Methylating Gene Hgca In Response To Water Table And Plant Functional Group Manipulations In Peat Soil, Madeline Peterson

Dissertations, Master's Theses and Master's Reports

Methyl-mercury (MeHg) is a potent neurotoxin that threatens the health of humans and wildlife alike. Climate warming threatens to shift regional precipitation and climate regimes in peatland environments, which could destabilize northern peatlands and accelerate both Hg release from soil and MeHg production. Peatlands are among the leading hotspots for MeHg, yet little is known about the community composition or functional relationship of mercury-methylating microbes in response to varying environmental conditions. The recognized mercury-methylating genes responsible for this activity are the obligatory gene pair hgcA and hgcB. Metagenomic data from the full-factorial peatland mesocosm experiment PEATcosm was obtained to …

Heterogeneous Tidal Marsh Soil Organic Carbon Accumulation Among And Within Temperate Estuaries In Australia, Connor Gorham, Paul S. Lavery, Jeffrey J. Kelleway, Pere Masque, Oscar Serrano

Research outputs 2014 to 2021

The scarcity of data on tidal marsh soil accumulation rates (SAR) and soil organic carbon accumulation rates (CAR) globally precludes a comprehensive assessment of the role of tidal marshes in climate change mitigation and adaptation. Particularly few data exist from the southern hemisphere and for Australia in particular, which contains ~24% of globally recognised tidal marsh extent. Here we estimate SAR and CAR over the last 70 years using 210Pb-based geochronologies in temperate estuarine tidal marsh ecosystems in southern Western Australia (WA). Specifically, we assessed tidal marsh ecosystems situated in two geomorphic settings (marine vs. fluvial deltas) within 10 wave-dominated, …

Accounting For The Influence Of Temperature And Location When Predicting Seagrass (Halophila Ovalis) Photosynthetic Performance, Nicole E. Said, Kathryn Mcmahon, Paul Lavery

Research outputs 2014 to 2021

We show that the effect of temperature on photosynthesis of a widely distributed and ecological important seagrass species was not consistent among locations, with some evidence of acclimation to the local temperature range. This has important implications for modelling seagrass productivity and the impacts of light reduction on seagrass ecosystems. Reduced light availability is one of the main pressures negatively impacting on seagrass meadows worldwide. Our knowledge of seagrass photosynthetic characteristics is critical to predicting and managing impacts of light reducing activities but suffers from two critical information gaps: first, data is overwhelmingly derived from studies of leaf tissue and …

Journal Of Ecology 2021 Global Rainfall-Seagrass Resilience-Swan River, Chanelle L. Webster, Kathryn M. Mcmahon, Paul S. Lavery, Simone Strydom, Marta Sánchez Alarcón, Kieryn L. Kilminster, Katherine Bennet, Sian Mcnamara

Research Datasets

The excel file contains: summary of daily maximum precipitation from global rainfall analysis, monthly change in seagrass indicators (biomass, leaf density etc); water quality data including salinity, temperature and light data. There are also .nc files containing precipitation data from 1979-2019.

Macroinvertebrate Responses To Hydrological Variation In Experimental Wetlands., Sergio A. Sabat-Bonilla

Electronic Theses and Dissertations

Predicted increases in the frequency of intense storms and periods of severe drought due to climate change represent a threat to wetland macroinvertebrate communities through alterations to the hydrological regime. I used experimental ponds to assess the effects of water permanence (i.e., duration of flooding) on the communities of aquatic macroinvertebrates. I predicted that permanent ponds would harbor higher diversity of longer-lived taxa whereas temporary ones will favor colonization by quick turnover, short-lived taxa and support lower consumer diversity. Results show differences in macroinvertebrate communities between permanent and temporary ponds can be mostly explained by hydrology and the amount of …