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Full-Text Articles in Life Sciences

Elevated Estuary Water Temperature Drives Fish Gut Dysbiosis And Increased Loads Of Pathogenic Vibrionaceae, Alessandra L. Suzzi, Michael Stat, Troy F. Gaston, Nachshon Siboni, Nathan L. R. Williams, Justin R. Seymour, Megan J. Huggett Feb 2023

Elevated Estuary Water Temperature Drives Fish Gut Dysbiosis And Increased Loads Of Pathogenic Vibrionaceae, Alessandra L. Suzzi, Michael Stat, Troy F. Gaston, Nachshon Siboni, Nathan L. R. Williams, Justin R. Seymour, Megan J. Huggett

Research outputs 2022 to 2026

Marine water temperatures are increasing globally, with eastern Australian estuaries warming faster than predicted. There is growing evidence that this rapid warming of coastal waters is increasing the abundance and virulence of pathogenic members of the Vibrionaceae, posing a significant health risk to both humans and aquatic organisms. Fish disease, notably outbreaks of emerging pathogens in response to environmental perturbations such as heatwaves, have been recognised in aquaculture settings. Considerably less is known about how rising sea surface temperatures will impact the microbiology of wild fish populations, particularly those within estuarine systems that are more vulnerable to warming. We used …


Fire Impacts And Dynamics Of Seasonally Dry Tropical Forest Of East Java, Indonesia, Sutomo, Eddie J. B. Van Etten Jan 2023

Fire Impacts And Dynamics Of Seasonally Dry Tropical Forest Of East Java, Indonesia, Sutomo, Eddie J. B. Van Etten

Research outputs 2022 to 2026

Background: Seasonally dry tropical forests (SDTFs) are globally important ecosystems which receive less research attention compared to tropical rainforests but are equally under serious threat. The objectives of this paper are to characterize the vegetation structure, diversity and composition of SDTF of Baluran National Park, East Java, Indonesia, and to assess the impact of burning this SDTF and its post-fire recovery. Methods: In the field, we measured floristic composition and dominance at sites with different fire histories in both SDTF and adjacent savannas of Baluran. Remote sensing image analysis was also employed using the MODIS burn area product and various …


Forest Hydrology In Chile: Past, Present, And Future, Francisco Balocchi, Mauricio Galleguillos, Diego Rivera, Alejandra Stehr, Jose Luis Arumi, Roberto Pizarro, Pablo Garcia-Chevesich, Andrés Iroumé, Juan J. Armesto, Pedro Hervé-Fernández, Carlos Oyarzún, Pilar Barría, Christian Little, Gabriel Mancilla, Santiago Yépez, Rolando Rodriguez, Don A. White, Richard P. Silberstein, Daniel G. Neary, Pablo Ramírez De Arellano Jan 2023

Forest Hydrology In Chile: Past, Present, And Future, Francisco Balocchi, Mauricio Galleguillos, Diego Rivera, Alejandra Stehr, Jose Luis Arumi, Roberto Pizarro, Pablo Garcia-Chevesich, Andrés Iroumé, Juan J. Armesto, Pedro Hervé-Fernández, Carlos Oyarzún, Pilar Barría, Christian Little, Gabriel Mancilla, Santiago Yépez, Rolando Rodriguez, Don A. White, Richard P. Silberstein, Daniel G. Neary, Pablo Ramírez De Arellano

Research outputs 2022 to 2026

This paper reviews the current knowledge of hydrological processes in Chilean temperate forests which extend along western South America from latitude 29° S to 56 ° S. This geographic region includes a diverse range of natural and planted forests and a broad sweep of vegetation, edaphic, topographic, geologic, and climatic settings which create a unique natural laboratory. Many local communities, endangered freshwater ecosystems, and downstream economic activities in Chile rely on water flows from forested catchments. This review aims to (i) provide a comprehensive overview of Chilean forest hydrology, to (ii) review prior research in forest hydrology in Chile, and …


Ecohydrology Of Coastal Aquifers In Humid Environments And Implications Of A Drying Climate, Madeleine Dyring, Harald Hofmann, David Stanton, Patrick Moss, Ray Froend Jan 2023

Ecohydrology Of Coastal Aquifers In Humid Environments And Implications Of A Drying Climate, Madeleine Dyring, Harald Hofmann, David Stanton, Patrick Moss, Ray Froend

Research outputs 2022 to 2026

Coastal groundwater-dependent ecosystems (GDEs), such as wetlands, estuaries and mangrove forests, are globally important habitats that promote biodiversity, provide climate regulation and serve as refugia for plant and animal communities. However, global warming, coastal development and over-abstraction threaten the availability and quality of groundwater in coastal aquifers and, by extension, the ecohydrological function of dependent ecosystems. Because ecohydrological knowledge of coastal groundwater is disparate across disciplines and habitat types, we begin by summarising the physiochemical, biological and hydrological processes supported by groundwater across coastal watersheds. Groundwater makes a significant but poorly recognised contribution to the function and resilience of coastal …


Ranking The Risk Of Co2 Emissions From Seagrass Soil Carbon Stocks Under Global Change Threats, Martin Dahl, Kathryn Mcmahon, Paul S. Lavery, Serena H. Hamilton, Catherine E. Lovelock, Oscar Serrano Jan 2023

Ranking The Risk Of Co2 Emissions From Seagrass Soil Carbon Stocks Under Global Change Threats, Martin Dahl, Kathryn Mcmahon, Paul S. Lavery, Serena H. Hamilton, Catherine E. Lovelock, Oscar Serrano

Research outputs 2022 to 2026

Seagrass meadows are natural carbon storage hotspots at risk from global change threats, and their loss can result in the remineralization of soil carbon stocks and CO2 emissions fueling climate change. Here we used expert elicitation and empirical evidence to assess the risk of CO2 emissions from seagrass soils caused by multiple human-induced, biological and climate change threats. Judgments from 41 experts were synthesized into a seagrass CO2 emission risk score based on vulnerability factors (i.e., spatial scale, frequency, magnitude, resistance and recovery) to seagrass soil organic carbon stocks. Experts perceived that climate change threats (e.g., gradual ocean warming and …


Review Of The Physical And Chemical Properties Of Seagrass Soils, Nerea Piñeiro-Juncal, Oscar Serrano, Miguel Ángel Mateo, Elena Diaz-Almela, Carmen Leiva-Dueñas, Antonio Martinez-Cortizas Dec 2022

Review Of The Physical And Chemical Properties Of Seagrass Soils, Nerea Piñeiro-Juncal, Oscar Serrano, Miguel Ángel Mateo, Elena Diaz-Almela, Carmen Leiva-Dueñas, Antonio Martinez-Cortizas

Research outputs 2022 to 2026

Seagrasses are a polyphyletic group of angiosperms that colonized marine environments more than 30 million years ago and currently inhabit coastal soft and rocky substrates in all continents except Antarctica. Due to their evolution from terrestrial plants, seagrasses have belowground organs that interact with the substrate, transforming it through chemo-physical processes analogous to terrestrial soil formation. Although seagrass substrates provide valuable ecosystem services including carbon and coastal stabilization, they have been largely regarded as sediments by marine scientists and neglected in soil science research. However, over the last decades, the increasing interest in carbon accumulation by seagrasses has generated multiple …


Distribution And Export Of Particulate Organic Carbon In East Antarctic Coastal Polynyas, Lavenia Ratnarajah, Viena Puigcorbé, Sébastien Moreau, Montserrat Roca-Martí, Julie Janssens, Matthew Corkill, Luis Duprat, Cristina Genovese, Jan Lieser, Pere Masqué, Delphine Lannuzel Dec 2022

Distribution And Export Of Particulate Organic Carbon In East Antarctic Coastal Polynyas, Lavenia Ratnarajah, Viena Puigcorbé, Sébastien Moreau, Montserrat Roca-Martí, Julie Janssens, Matthew Corkill, Luis Duprat, Cristina Genovese, Jan Lieser, Pere Masqué, Delphine Lannuzel

Research outputs 2022 to 2026

Polynyas represent regions of enhanced primary production because of the low, or absent, sea-ice cover coupled with the proximity of nutrient sources. However, studies throughout the Southern Ocean suggest elevated primary production does not necessarily result in increased carbon export. Three coastal polynyas in East Antarctica and an off-shelf region were visited during the austral summer from December 2016 to January 2017 to examine the vertical distribution and concentration of particulate organic carbon (POC). Carbon export was also examined using thorium-234 (234Th) as a proxy at two of the polynyas. Our results show that concentrations and integrated POC …


Non-Charismatic Waterbodies And Ecosystem Disservices: Mine Pit Lakes Are Underrepresented In The Literature, Rachele Bernasconi, Mark A. Lund, Melanie L. Blanchette Nov 2022

Non-Charismatic Waterbodies And Ecosystem Disservices: Mine Pit Lakes Are Underrepresented In The Literature, Rachele Bernasconi, Mark A. Lund, Melanie L. Blanchette

Research outputs 2022 to 2026

Pit lakes are one of the greatest legacies of open-cut mining. Despite the potential hazards of these lakes, they represent newly formed ecosystems with great scientific and ecological potential. Although thousands of pit lakes occur on every inhabited continent, with more being created, the microbial ecology of pit lakes is relatively under-researched. We evaluated the current state of microbial research in pit lakes by performing a Web of Science search and creating a literature database. Study lakes were categorized according to location and water quality (pH and conductivity) which is a key community and environmental concern. Research technology employed in …


Is The Reputation Of Eucalyptus Plantations For Using More Water Than Pinus Plantations Justified?, Donald A. White, Shiqi Ren, Daniel S. Mendham, Francisco Balocchi-Contreras, Richard P. Silberstein, Dean Meason, Andrés Iroumé, Pablo Ramirez De Arellano Oct 2022

Is The Reputation Of Eucalyptus Plantations For Using More Water Than Pinus Plantations Justified?, Donald A. White, Shiqi Ren, Daniel S. Mendham, Francisco Balocchi-Contreras, Richard P. Silberstein, Dean Meason, Andrés Iroumé, Pablo Ramirez De Arellano

Research outputs 2022 to 2026

The effect of Eucalyptus plantations on water balance is thought to be more severe than for commercial alternatives such as Pinus species. Although this perception is firmly entrenched, even in the scientific community, only four direct comparisons of the effect on the water balance of a Eucalyptus species and a commercial alternative have been published. One of these, from South Africa, showed that Eucalyptus grandis caused a larger and more rapid reduction in streamflow than Pinus patula. The other three, one in South Australia and two in Chile, did not find any significant difference between the annual evapotranspiration of E. …


Contrasting Particle Fluxes And Composition In A Submarine Canyon Affected By Natural Sediment Transport Events And Bottom Trawling, Sarah Paradis, Marta Arjona-Camas, Miguel Goñi, Albert Palanques, Pere Masqué, Pere Puig Oct 2022

Contrasting Particle Fluxes And Composition In A Submarine Canyon Affected By Natural Sediment Transport Events And Bottom Trawling, Sarah Paradis, Marta Arjona-Camas, Miguel Goñi, Albert Palanques, Pere Masqué, Pere Puig

Research outputs 2022 to 2026

Submarine canyons are important conduits of sediment and organic matter to deep-sea environments, mainly during high-energy natural events such as storms, river floods, or dense shelf water cascading, but also due to human activities such as bottom trawling. The contributions of natural and trawling-induced sediment and organic matter inputs into Palamós Canyon (NW Mediterranean) were assessed from three instrumented moorings deployed in the axis and northern flank of the canyon covering the trawling closure (February) and the trawling season (March-December) of 2017. During the trawling closure, large sediment fluxes with high contents of labile marine organic matter content were registered …


Species Traits And Geomorphic Setting As Drivers Of Global Soil Carbon Stocks In Seagrass Meadows, H. Kennedy, J. F. Pagès, D. Lagomasino, A. Arias-Ortiz, P. Colarusso, J. W. Fourqurean, M. N. Githaiga, J. L. Howard, D. Krause-Jensen, T. Kuwae, Paul S. Lavery, P. I. Macreadie, N. Marbà, Pere Masqué, I. Mazarrasa, T. Miyajima, Oscar Serrano, C. M. Duarte Oct 2022

Species Traits And Geomorphic Setting As Drivers Of Global Soil Carbon Stocks In Seagrass Meadows, H. Kennedy, J. F. Pagès, D. Lagomasino, A. Arias-Ortiz, P. Colarusso, J. W. Fourqurean, M. N. Githaiga, J. L. Howard, D. Krause-Jensen, T. Kuwae, Paul S. Lavery, P. I. Macreadie, N. Marbà, Pere Masqué, I. Mazarrasa, T. Miyajima, Oscar Serrano, C. M. Duarte

Research outputs 2022 to 2026

Our knowledge of the factors that can influence the stock of organic carbon (OC) that is stored in the soil of seagrass meadows is evolving, and several causal effects have been used to explain the variation of stocks observed at local to national scales. To gain a global-scale appreciation of the drivers that cause variation in soil OC stocks, we compiled data on published species-specific traits and OC stocks from monospecific and mixed meadows at multiple geomorphological settings. Species identity was recognized as an influential driver of soil OC stocks, despite their large intraspecific variation. The most important seagrass species …


Guidelines For Model Adaptation: A Study Of The Transferability Of A General Seagrass Ecosystem Dynamic Bayesian Networks Model, Paula Sobenko Hatum, Kathryn Mcmahon, Kerrie Mengersen, Paul Pao Yen Wu Aug 2022

Guidelines For Model Adaptation: A Study Of The Transferability Of A General Seagrass Ecosystem Dynamic Bayesian Networks Model, Paula Sobenko Hatum, Kathryn Mcmahon, Kerrie Mengersen, Paul Pao Yen Wu

Research outputs 2022 to 2026

In general, it is not feasible to collect enough empirical data to capture the entire range of processes that define a complex system, either intrinsically or when viewing the system from a different geographical or temporal perspective. In this context, an alternative approach is to consider model transferability, which is the act of translating a model built for one environment to another less well-known situation. Model transferability and adaptability may be extremely beneficial—approaches that aid in the reuse and adaption of models, particularly for sites with limited data, would benefit from widespread model uptake. Besides the reduced effort required to …


Targeting Paleovalley-Related Ferricrete Units In Yilgarn Craton Using High-Resolution Aeromagnetic Data And Spatial Machine Learning, Hassan Talebi, Jelena Markov, Walid Salama, Alex Otto, Vasek Metelka, Ravi Anand, Dave Cole Jul 2022

Targeting Paleovalley-Related Ferricrete Units In Yilgarn Craton Using High-Resolution Aeromagnetic Data And Spatial Machine Learning, Hassan Talebi, Jelena Markov, Walid Salama, Alex Otto, Vasek Metelka, Ravi Anand, Dave Cole

Research outputs 2022 to 2026

The ferricrete units (Fe oxide cemented colluvial-alluvial sediment) of the Yilgarn Craton in Western Australia formed during the humid tropical and sub-tropical climates of the Cenozoic. Ferricretes are generally developed on long-lived paleodrainage systems and are products of the ferruginisation of detritus provided by the continuous erosion of upslopes. These iron-rich accumulations can become Au-enriched, as is the case in several locations previously discovered in the Yilgarn Craton; many of these host economic secondary gold deposits (e.g., Moolart Well, Mt Gibson, and Bulchina), typically occurring downslope of low saprolite hills and near paleovalleys (i.e., inset-valleys). Inset-valleys are a common paleotopographic …


An Analysis Of The Effects Of Large Wildfires On The Hydrology Of Three Small Catchments In Central Chile Using Tritium-Based Measurements And Hydrological Metrics, Francisco Balocchi, Diego Rivera, José Luis Arumi, Uwe Morgenstern, Donald A. White, Richard P. Silberstein, Pablo Ramírez De Arellano Mar 2022

An Analysis Of The Effects Of Large Wildfires On The Hydrology Of Three Small Catchments In Central Chile Using Tritium-Based Measurements And Hydrological Metrics, Francisco Balocchi, Diego Rivera, José Luis Arumi, Uwe Morgenstern, Donald A. White, Richard P. Silberstein, Pablo Ramírez De Arellano

Research outputs 2022 to 2026

Wildfires are an important disturbance affecting catchments’ soil and hydrological processes within. Wildfires are predicted to increase in both frequency and severity under climate change. Here, we present measurements of tritium (3H) in surface water of three streams before and after the ‘las Máquinas’ megafire of January 2017 in central Chile and streamflow metrics. Mean transit times (MTTs) of water were calculated in three coastal catchments with the Mediterranean climate type, covered by native forest, a mixture of native forest and Pinus radiata D. Don, and P. radiata. Lumped parameter models (LPMs) were used to obtain MTTs. Tritium activities from …


Quantitative Analysis Of Methodological And Environmental Influences On Survival Of Planted Mangroves In Restoration And Afforestation, Daniel Gorman, Mathew A. Vanderklift, Anna Lafratta Mar 2022

Quantitative Analysis Of Methodological And Environmental Influences On Survival Of Planted Mangroves In Restoration And Afforestation, Daniel Gorman, Mathew A. Vanderklift, Anna Lafratta

Research outputs 2022 to 2026

Mangrove planting has been employed for decades to achieve aims associated with restoration and afforestation. Often, survival of planted mangroves is low. Improving survival might be aided by augmenting the understanding of which planting methods and environmental variables most influence plant survival across a range of contexts. The aim of this study was to provide a global synthesis of the influence of planting methods and background environment on mangrove survival. This was achieved through a global meta-analysis, which compiled published survival rates for the period 1979–2021 and analyzed the influence of decisions about minimum spacing and which life stage to …


Predicting Climate-Sensitive Water-Related Disease Trends Based On Health, Seasonality And Weather Data In Fiji, Sarah Nelson, Aaron Jenkins, Stacy D. Jupiter, Pierre Horwitz, Sangeeta Mangubhai, Seye Abimbola, Anaseini Ratu, Timoci Naivalulevu, Joel Negin Jan 2022

Predicting Climate-Sensitive Water-Related Disease Trends Based On Health, Seasonality And Weather Data In Fiji, Sarah Nelson, Aaron Jenkins, Stacy D. Jupiter, Pierre Horwitz, Sangeeta Mangubhai, Seye Abimbola, Anaseini Ratu, Timoci Naivalulevu, Joel Negin

Research outputs 2022 to 2026

Leptospirosis, typhoid and dengue are three water-related diseases influenced by environmental factors. We examined whether seasonality and rainfall predict reported syndromes associated with leptospirosis, typhoid and dengue in Fiji. Poisson generalised linear models were fitted with s6 early warning, alert and response system (EWARS) syndromic conditions from March 2016 until December 2020, incorporating seasonality, temperature and rainfall. Watery diarrhoea, prolonged fever and suspected dengue displayed seasonal trends with peaks corresponding with the rainy season, while bloody diarrhoea, acute fever with rash and acute jaundice syndrome did not. Seasonality was the most common predictor for watery and bloody diarrhoea, prolonged fever, …


Seasonal Niche Differentiation Among Closely Related Marine Bacteria, Adrià Auladell, Albert Barberán, Ramiro Logares, Esther Garcés, Josep M. Gasol, Isabel Ferrera Jan 2022

Seasonal Niche Differentiation Among Closely Related Marine Bacteria, Adrià Auladell, Albert Barberán, Ramiro Logares, Esther Garcés, Josep M. Gasol, Isabel Ferrera

Research outputs 2014 to 2021

Bacteria display dynamic abundance fluctuations over time in marine environments, where they play key biogeochemical roles. Here, we characterized the seasonal dynamics of marine bacteria in a coastal oligotrophic time series station, tested how similar the temporal niche of closely related taxa is, and what are the environmental parameters modulating their seasonal abundance patterns. We further explored how conserved the niche is at higher taxonomic levels. The community presented recurrent patterns of seasonality for 297 out of 6825 amplicon sequence variants (ASVs), which constituted almost half of the total relative abundance (47%). For certain genera, niche similarity decreased as nucleotide …


A Phylogeny Of Antirrhinum Reveals Parallel Evolution Of Alpine Morphology, Mario Durán-Castillo, Andrew Hudson, Yvette Wilson, David L. Field, Alex D. Twyford Jan 2022

A Phylogeny Of Antirrhinum Reveals Parallel Evolution Of Alpine Morphology, Mario Durán-Castillo, Andrew Hudson, Yvette Wilson, David L. Field, Alex D. Twyford

Research outputs 2014 to 2021

Parallel evolution of similar morphologies in closely related lineages provides insight into the repeatability and predictability of evolution. In the genus Antirrhinum (snapdragons), as in other plants, a suite of morphological characters are associated with adaptation to alpine environments.

We tested for parallel trait evolution in Antirrhinum by investigating phylogenetic relationships using restriction-site associated DNA (RAD) sequencing. We then associated phenotypic information to our phylogeny to reconstruct the patterns of morphological evolution and related this to evidence for hybridisation between emergent lineages.

Phylogenetic analyses showed that the alpine character syndrome is present in multiple groups, suggesting that Antirrhinum has repeatedly …


Connectivity Shapes Functional Diversity And Maintains Complementarity In Surf Zones On Exposed Coasts, Christopher J. Henderson, Ben L. Gilby, Andrew D. Olds, Jesse Mosman, Rod M. Connolly, Glenn Hyndes, Brendan Kelaher, Brooke Maslo, Alan Williams, Thomas A. Schlacher Jan 2022

Connectivity Shapes Functional Diversity And Maintains Complementarity In Surf Zones On Exposed Coasts, Christopher J. Henderson, Ben L. Gilby, Andrew D. Olds, Jesse Mosman, Rod M. Connolly, Glenn Hyndes, Brendan Kelaher, Brooke Maslo, Alan Williams, Thomas A. Schlacher

Research outputs 2022 to 2026

Habitat complexity and connectivity can influence the number of species and their diversity across a landscape. For the surf zones of ocean-exposed beaches, globally one of the longest habitat interfaces, the assumed low structural complexity, and apparent homogeneity, of the sandy seafloor habitats predicts low taxonomic and functional diversity. Here, we assessed how the configuration of the seascape and the context of different beach structure functional diversity and functional niche space of fish assemblages in surf zones. We expected that beaches that were well connected with highly productive and complex estuarine and reef habitats would support a greater level of …


Editorial: Fire Regimes In Desert Ecosystems: Drivers, Impacts And Changes, Eddie J. B. Van Etten, Matthew L. Brooks, Aaron C. Greenville, Glenda M. Wardle Jan 2022

Editorial: Fire Regimes In Desert Ecosystems: Drivers, Impacts And Changes, Eddie J. B. Van Etten, Matthew L. Brooks, Aaron C. Greenville, Glenda M. Wardle

Research outputs 2022 to 2026

Although not commonly associated with fire, many desert ecosystems across the globe do occasionally burn, and there is evidence that fire incidences are increasing, leading to altered fire regimes in this biome. The increased prevalence of megafires (wildfires > 10,000 ha in size and typically damaging) in most global biomes is linked to climate change, although those occurring in deserts have received far less attention, from both a research and policy perspective, than that of forested ecosystems (Linley et al., 2022). Understanding the drivers of desert fires, from climate to landscape patterns of hydrology and soil, and how these may be …


Uncoupled Seasonal Variability Of Transparent Exopolymer And Coomassie Stainable Particles In Coastal Mediterranean Waters: Insights Into Sources And Driving Mechanisms, Marina Zamanillo, Eva Ortega-Retuerta, Carolina Cisternas-Novoa, Cèlia Marrasé, Carles Pelejero, Josep Pascual, Josep M. Gasol, Anja Engel, Rafel Simó Dec 2021

Uncoupled Seasonal Variability Of Transparent Exopolymer And Coomassie Stainable Particles In Coastal Mediterranean Waters: Insights Into Sources And Driving Mechanisms, Marina Zamanillo, Eva Ortega-Retuerta, Carolina Cisternas-Novoa, Cèlia Marrasé, Carles Pelejero, Josep Pascual, Josep M. Gasol, Anja Engel, Rafel Simó

Research outputs 2014 to 2021

Transparent exopolymer particles (TEP) and Coomassie stainable particles (CSP) are gel-like particles, ubiquitous in the ocean, that affect important biogeochemical processes including organic carbon cycling by planktonic food webs. Despite much research on both groups of particles (especially TEP) over many years, whether they exist as distinctly stainable fractions of the same particles or as independent particles, each with different driving factors, remains unclear. To address this question, we examined the temporal dynamics of TEP and CSP over 2 complete seasonal cycles at 2 coastal sites in the Northwestern Mediterranean Sea, the Blanes Bay Microbial Observatory (BBMO) and the L’Estartit …


The Use Of Singlebeam Echo-Sounder Depth Data To Produce Demersal Fish Distribution Models That Are Comparable To Models Produced Using Multibeam Echo-Sounder Depth, Marcela Montserrat Landero Figueroa, Miles J. G. Parsons, Benjamin J. Saunders, Ben Radford, Chandra Salgado-Kent, Iain M. Parnum Dec 2021

The Use Of Singlebeam Echo-Sounder Depth Data To Produce Demersal Fish Distribution Models That Are Comparable To Models Produced Using Multibeam Echo-Sounder Depth, Marcela Montserrat Landero Figueroa, Miles J. G. Parsons, Benjamin J. Saunders, Ben Radford, Chandra Salgado-Kent, Iain M. Parnum

Research outputs 2014 to 2021

Seafloor characteristics can help in the prediction of fish distribution, which is required for fisheries and conservation management. Despite this, only 5%–10% of the world's seafloor has been mapped at high resolution, as it is a time-consuming and expensive process. Multibeam echo-sounders (MBES) can produce high-resolution bathymetry and a broad swath coverage of the seafloor, but require greater financial and technical resources for operation and data analysis than singlebeam echo-sounders (SBES). In contrast, SBES provide comparatively limited spatial coverage, as only a single measurement is made from directly under the vessel. Thus, producing a continuous map requires interpolation to fill …


Thirty Critical Research Needs For Managing An Ecologically And Culturally Unique Remote Marine Environment: The Kimberley Region Of Western Australia, C. Cvitanovic, M. Mackay, R. Kelly, S. K. Wilson, K. Waples, K. L. Nash, E. I. Van Putten, S. Field, T. Botterill-James, B. J. Austin, L. E. Beckley, F. Boschetti, M. Depczynski, R. J. Dobbs, R. D. Evans, M. Feng, R. K. Goater, A. R. Halford, A. Kendrick, G. A. Kendrick, G. D. B. Lincoln, L. J. Ludgerus, R. J. Lowe, Kathryn Mcmahon, J. K. Munro, S. J. Newman, C. Nutt, L. Pearson, M. J. O'Leary, Z. T. Richards, W. D. Robbins, D. I. Rogers, Chandra P. Salgado Kent, V. Schoepf, M. J. Travers, M. Thums, A. D. Tucker, J. N. Underwood, S. Whiting, D. Matthews, Dambimangari Aboriginal Corporation Oct 2021

Thirty Critical Research Needs For Managing An Ecologically And Culturally Unique Remote Marine Environment: The Kimberley Region Of Western Australia, C. Cvitanovic, M. Mackay, R. Kelly, S. K. Wilson, K. Waples, K. L. Nash, E. I. Van Putten, S. Field, T. Botterill-James, B. J. Austin, L. E. Beckley, F. Boschetti, M. Depczynski, R. J. Dobbs, R. D. Evans, M. Feng, R. K. Goater, A. R. Halford, A. Kendrick, G. A. Kendrick, G. D. B. Lincoln, L. J. Ludgerus, R. J. Lowe, Kathryn Mcmahon, J. K. Munro, S. J. Newman, C. Nutt, L. Pearson, M. J. O'Leary, Z. T. Richards, W. D. Robbins, D. I. Rogers, Chandra P. Salgado Kent, V. Schoepf, M. J. Travers, M. Thums, A. D. Tucker, J. N. Underwood, S. Whiting, D. Matthews, Dambimangari Aboriginal Corporation

Research outputs 2014 to 2021

The Kimberley marine environment in Western Australia is widely recognised for its outstanding natural features, vast and remote sea and landscapes, and Indigenous cultural significance. To ensure that adequate baseline information is available to understand, monitor and manage this remote and relatively understudied region, scientific exploration was undertaken between 2012 and 2018 as part of the Kimberley Marine Research Program (KMRP). Whilst this program generated significant amounts of new knowledge about the region, important research gaps remain, that if answered, should improve the capacity of managers to conserve the region's values more effectively. Here, we apply established participatory horizon scanning …


Predictors Of Marine Genetic Structure In The Indo-Australian Archipelago, Udhi E. Hernawan, Paul S. Lavery, Gary A. Kendrick, Kor-Jent Van Dijk, Yaya I. Ulumuddin, Teddy Triandiza, Kathryn M. Mcmahon Sep 2021

Predictors Of Marine Genetic Structure In The Indo-Australian Archipelago, Udhi E. Hernawan, Paul S. Lavery, Gary A. Kendrick, Kor-Jent Van Dijk, Yaya I. Ulumuddin, Teddy Triandiza, Kathryn M. Mcmahon

Research outputs 2014 to 2021

The spatial genetic structure of marine organisms is related to dispersal and life-history traits, historical processes, current oceanographic connectivity and habitat features. Here, we assessed the relative importance of these factors for the genetic structure of a broad range of marine species in the Indo Australian Archipelago (IAA). We collated published data on 99 marine species from eight taxonomic groups (ascidians, fishes, molluscs, crustaceans, echinoderms, corals, reptiles, and marine plants) and used generalized linear models (GLMs) to estimate the best predictors of genetic structure. Genetic structure was characterized by FST and the number of genetic clusters over the study area. …


What Lies Beneath: Predicting Seagrass Below-Ground Biomass From Above-Ground Biomass, Environmental Conditions And Seagrass Community Composition, C. J. Collier, L. M. Langlois, Kathryn M. Mcmahon, J. Udy, M. Rasheed, E. Lawrence, A. B. Carter, M. W. Fraser, L. J. Mckenzie Jan 2021

What Lies Beneath: Predicting Seagrass Below-Ground Biomass From Above-Ground Biomass, Environmental Conditions And Seagrass Community Composition, C. J. Collier, L. M. Langlois, Kathryn M. Mcmahon, J. Udy, M. Rasheed, E. Lawrence, A. B. Carter, M. W. Fraser, L. J. Mckenzie

Research outputs 2014 to 2021

© 2020 Seagrass condition, resilience and ecosystem services are affected by the below-ground tissues (BGr) but these are rarely monitored. In this study we compiled historical data across northern Australia to investigate biomass allocation strategies in 13 tropical seagrass species. There was sufficient data to undertake statistical analysis for five species: Cymodocea serrulata, Halophila ovalis, Halodule uninervis, Thalassia hemprichii, and Zostera muelleri. The response of below-ground biomass (BGr) to above-ground biomass (AGr) and other environmental and seagrass community composition predictor variables were assessed using Generalized Linear Models. Environmental data included: region, season, sediment type, water depth, proximity to land-based sources …


A Temporal Record Of Microplastic Pollution In Mediterranean Seagrass Soils, Martin Dahl, Sanne Bergman, Mats Björk, Elena Diaz-Almela, Maria Granberg, Martin Gullström, Carmen Leiva-Dueñas, Kerstin Magnusson, Candela Marco-Méndez, Nerea Piñeiro-Juncal, Miguel Ángel Mateo Jan 2021

A Temporal Record Of Microplastic Pollution In Mediterranean Seagrass Soils, Martin Dahl, Sanne Bergman, Mats Björk, Elena Diaz-Almela, Maria Granberg, Martin Gullström, Carmen Leiva-Dueñas, Kerstin Magnusson, Candela Marco-Méndez, Nerea Piñeiro-Juncal, Miguel Ángel Mateo

Research outputs 2014 to 2021

© 2021 Elsevier Ltd Plastic pollution is emerging as a potential threat to the marine environment. In the current study, we selected seagrass meadows, known to efficiently trap organic and inorganic particles, to investigate the concentrations and dynamics of microplastics in their soil. We assessed microplastic contamination and accumulation in 210Pb dated soil cores collected in Posidonia oceanica meadows at three locations along the Spanish Mediterranean coast, with two sites located in the Almería region (Agua Amarga and Roquetas) and one at Cabrera Island (Santa Maria). Almería is known for its intense agricultural industry with 30 000 ha of plastic-covered …


Persistence Of Biogeochemical Alterations Of Deep-Sea Sediments By Bottom Trawling, S. Paradis, M. Goñi, Pere Masqué, R. Durán, M. Arjona-Camas, A. Palanques, P. Puig Jan 2021

Persistence Of Biogeochemical Alterations Of Deep-Sea Sediments By Bottom Trawling, S. Paradis, M. Goñi, Pere Masqué, R. Durán, M. Arjona-Camas, A. Palanques, P. Puig

Research outputs 2014 to 2021

Bottom trawling grounds have been expanding to deeper areas of the oceans since the mid-XXth century, and mitigating strategies aimed to protect fish stocks, such as temporal trawling closures, have recently been implemented. Here we investigated the biogeochemical properties of sediment from a deep-sea trawling ground in Palamós Canyon (NW Mediterranean) to assess the effects of a 2-months trawling closure in the recovery of sedimentary organic matter. In comparison to untrawled areas, the continuous erosion and sediment mixing in trawling grounds led to coarser reworked sediments impoverished in organic carbon (∼30% loss) and promoted the degradation of labile compounds (52–70% …


Dynamics And Fate Of Blue Carbon In A Mangrove–Seagrass Seascape: Influence Of Landscape Configuration And Land-Use Change, Maria E. Asplund, Martin Dahl, Rashid O. Ismail, Ariane Arias-Ortiz, Diana Deyanova, João N. Franco, Linus Hammar, Arielle I. Hoamby, Hans W. Linderholm, Liberatus D. Lyimo, Diana Perry, Lina M. Rasmusson, Samantha N. Ridgway, Gloria Salgado Gispert, Stéphanie D’Agata, Leah Glass, Jamal Angelot Mahafina, Volanirina Ramahery, Pere Masque, Mats Björk, Martin Gullström Jan 2021

Dynamics And Fate Of Blue Carbon In A Mangrove–Seagrass Seascape: Influence Of Landscape Configuration And Land-Use Change, Maria E. Asplund, Martin Dahl, Rashid O. Ismail, Ariane Arias-Ortiz, Diana Deyanova, João N. Franco, Linus Hammar, Arielle I. Hoamby, Hans W. Linderholm, Liberatus D. Lyimo, Diana Perry, Lina M. Rasmusson, Samantha N. Ridgway, Gloria Salgado Gispert, Stéphanie D’Agata, Leah Glass, Jamal Angelot Mahafina, Volanirina Ramahery, Pere Masque, Mats Björk, Martin Gullström

Research outputs 2014 to 2021

Context: Seagrass meadows act as efficient natural carbon sinks by sequestering atmospheric CO and through trapping of allochthonous organic material, thereby preserving organic carbon (C ) in their sediments. Less understood is the influence of landscape configuration and transformation (land-use change) on carbon sequestration dynamics in coastal seascapes across the land–sea interface. Objectives: We explored the influence of landscape configuration and degradation of adjacent mangroves on the dynamics and fate of C in seagrass habitats. Methods: Through predictive modelling, we assessed sedimentary C content, stocks and source composition in multiple seascapes (km-wide buffer zones) dominated by different seagrass communities in …


A Threatened Ecological Community: Research Advances And Priorities For Banksia Woodlands, Alison L. Ritchie, Lauren N. Svejcar, Bronwyn M. Ayre, Julian Bolleter, Aaron Brace, Michael D. Craig, Belinda Davis, Robert A. Davis, Eddie J. B. Van Etten, Joseph B. Fontaine, William M. Fowler, Ray H. Froend, Christine Groom, Giles E. S. J. Hardy, Paula Hooper, Anna J. M. Hopkins, Michael Hughes, Siegfried L. Krauss, Matthias Leopold, Ben P. Miller, Russell G. Miller, Cristina E. Ramalho, Katinka X. Ruthrof, Christopher Shaw, Jason C. Stevens, Ryan Tangney, Leonie E. Valentine Jan 2021

A Threatened Ecological Community: Research Advances And Priorities For Banksia Woodlands, Alison L. Ritchie, Lauren N. Svejcar, Bronwyn M. Ayre, Julian Bolleter, Aaron Brace, Michael D. Craig, Belinda Davis, Robert A. Davis, Eddie J. B. Van Etten, Joseph B. Fontaine, William M. Fowler, Ray H. Froend, Christine Groom, Giles E. S. J. Hardy, Paula Hooper, Anna J. M. Hopkins, Michael Hughes, Siegfried L. Krauss, Matthias Leopold, Ben P. Miller, Russell G. Miller, Cristina E. Ramalho, Katinka X. Ruthrof, Christopher Shaw, Jason C. Stevens, Ryan Tangney, Leonie E. Valentine

Research outputs 2014 to 2021

The rapid expansion of urban areas worldwide is leading to native habitat loss and ecosystem fragmentation and degradation. Although the study of urbanisation's impact on biodiversity is gaining increasing interest globally, there is still a disconnect between research recommendations and urbanisation strategies. Expansion of the Perth metropolitan area on the Swan Coastal Plain in south-western Australia, one of the world's thirty-six biodiversity hotspots, continues to affect the Banksia Woodlands (BWs) ecosystem, a federally listed Threatened Ecological Community (TEC). Here, we utilise the framework of a 1989 review of the state of knowledge of BWs ecology and conservation to examine scientific …


Viral-Mediated Microbe Mortality Modulated By Ocean Acidification And Eutrophication: Consequences For The Carbon Fluxes Through The Microbial Food Web, Andrea Malits, Julia A. Boras, Vanessa Balagué, Eva Calvo, Josep M. Gasol, Cèlia Marrasé, Carles Pelejero, Jarone Pinhassi, Maria Montserrat Sala, Dolors Vaqué Jan 2021

Viral-Mediated Microbe Mortality Modulated By Ocean Acidification And Eutrophication: Consequences For The Carbon Fluxes Through The Microbial Food Web, Andrea Malits, Julia A. Boras, Vanessa Balagué, Eva Calvo, Josep M. Gasol, Cèlia Marrasé, Carles Pelejero, Jarone Pinhassi, Maria Montserrat Sala, Dolors Vaqué

Research outputs 2014 to 2021

Anthropogenic carbon emissions are causing changes in seawater carbonate chemistry including a decline in the pH of the oceans. While its aftermath for calcifying microbes has been widely studied, the effect of ocean acidification (OA) on marine viruses and their microbial hosts is controversial, and even more in combination with another anthropogenic stressor, i.e., human-induced nutrient loads. In this study, two mesocosm acidification experiments with Mediterranean waters from different seasons revealed distinct effects of OA on viruses and viral-mediated prokaryotic mortality depending on the trophic state and the successional stage of the plankton community. In the winter bloom situation, low …