Life Sciences Commons^™

Perennializing Marginal Croplands: Going Back To The Future To Mitigate Climate Change With Resilient Biobased Feedstocks, Salvador Ramirez Ii, Marty R. Schmer, Virginia L. Jin, Robert B. Mitchell, Catherine E. Stewart, Jay Parsons, Daren D. Redfearn, John J. Quinn, Gary E. Varvel, Kenneth P. Vogel, Ronald F. Follett

United States Department of Agriculture-Agricultural Research Service / University of Nebraska-Lincoln: Faculty Publications

Managing annual row crops on marginally productive croplands can be environmentally unsustainable and result in variable economic returns. Incorporating perennial bioenergy feedstocks into marginally productive cropland can engender ecosystem services and enhance climate resiliency while also diversifying farm incomes. We use one of the oldest bioenergy-specific field experiments in North America to evaluate economically and environmentally sustainable management practices for growing perennial grasses on marginal cropland. This long-term field trial called 9804 was established in 1998 in eastern Nebraska and compared the productivity and sustainability of corn (Zea mays L.)—both corn grain and corn stover—and switchgrass (Panicum virgatum …

Invasion Of Plant Communities, Stephen L. Young, Sarah Kimball, Stephen J. Novak

United States Department of Agriculture-Agricultural Research Service / University of Nebraska-Lincoln: Faculty Publications

Due to numerous human activities, organisms have been transported and either accidentally or deliberately introduced all around the globe. Biological invasions are now considered to be one of the main drivers of global change because many invasive plants have severe ecological, economic, and health consequences. Thus, there is an ever-growing need to better understand invasions to determine how specific plant species are able to establish in communities and, in many cases, expand their range. Here, we describe the invasion process and how it contributes to the invasion of plant communities. We present an invasion-factor framework (IFF) model that uses three …

Description Of Baetao-Manteiga 41 And ‘Yunguilla’ Superior Andean Common Beans For Tanzanian Production Environments, S. Nchimbi Msolla, Phillip N. Miklas, D. Fourie, M. Kilango, T. Porch

United States Department of Agriculture-Agricultural Research Service / University of Nebraska-Lincoln: Faculty Publications

An international effort was initiated with the evaluation of a diverse set of largeseeded Andean common beans (Phaseolus vulgaris L.), the Andean Diversity Panel, in sub-Saharan Africa. Several entries in the panel have been selected for extensive characterization on the basis of high performance acrossmultiple location × year trials in Tanzania—conducted both on station and on farm. Baetao- Manteiga 41, tested asADP-190, has a commercialKablanketi (light purple speckled) seed type, and ‘Yunguilla’, tested as ADP-447, has a commercial Calima (red mottled) seed type. Both lines exhibited yield stability, vigorous growth under low fertility conditions, angular leaf spot resistance, andmoderate …

Genome-Wide Transcriptome And Physiological Analyses Provide New Insights Into Peanut Drought Response Mechanisms, Sailaja Bhogireddy, Abishek Xavier, International Crops Research Institute For The Semi-Arid Tropics (Icrisat), Hyderabad, India, Nancy Layland, Renee Arias, Paxton Payton, Spurthi N. Nayak, Manish K. Pandey, Naveen Puppala, Rajeev K. Varshney

United States Department of Agriculture-Agricultural Research Service / University of Nebraska-Lincoln: Faculty Publications

Drought is one of the main constraints in peanut production in West Texas and eastern New Mexico regions due to the depletion of groundwater. A multi-seasonal phenotypic analysis of 10 peanut genotypes revealed C76-16 (C-76) and Valencia-C (Val-C) as the best and poor performers under deficit irrigation (DI) in West Texas, respectively. In order to decipher transcriptome changes under DI, RNAseq was performed in C-76 and Val-C. Approximately 369 million raw reads were generated from 12 different libraries of two genotypes subjected to fully irrigated (FI) and DI conditions, of which ~329 million (90.2%) filtered reads were mapped to the …

Draft Genome Assembly Of Passalora Sequoiae A Needle Blight Pathogen On Leyland Cypress, Warren E. Copes, Jorge Ibarra Caballero, Ebrahiem Babiker, Jane E. Stewart, Valerie A. Orner, Alan S. Windham, Renee Arias

United States Department of Agriculture-Agricultural Research Service / University of Nebraska-Lincoln: Faculty Publications

Objective: Passalora sequoiae (family Mycosphaerellaceae) causes a twig blight on Leyland cypress that requires numerous fungicide applications annually to minimize economic losses for ornamental plant nursery and Christmas tree producers. The objective was to generate a high-quality draft assembly of the genome of P. sequoiae as a resource for primer development to investigate genotype diversity. Data description: We report here the genome sequence of P. sequoiae 9LC2 that was isolated from Leyland cypress ‘Leighton Green’ in 2017 in southern Mississippi, USA. The draft genome was obtained using Pacific Biosciences (PacBio) SMRT and Illumina HiSeq 2500 sequencing. Illumina reads were mapped …

Genetic Diversity Of Aflatoxin-Producing Aspergillus Flavus Isolated From Selected Groundnut Growing Agro-Ecological Zones Of Uganda, Amos Acur, Renee Arias, Steven Odongo, Samuel Tuhaise, National Agricultural Research Laboratories, Kampala, Uganda, John Adriko, Dennis Muhanguzi, Stephen Buah, Andrew Kiggundu

United States Department of Agriculture-Agricultural Research Service / University of Nebraska-Lincoln: Faculty Publications

Background: Groundnut pre- and post-harvest contamination is commonly caused by fungi from the Genus Aspergillus. Aspergillus flavus is the most important of these fungi. It belongs to section Flavi; a group consisting of aflatoxigenic (A. flavus, A. parasiticus and A. nomius) and non-aflatoxigenic (A. oryzae, A. sojae and A. tamarii) fungi. Aflatoxins are food-borne toxic secondary metabolites of Aspergillus species associated with severe hepatic carcinoma and children stuntedness. Despite the well-known public health significance of aflatoxicosis, there is a paucity of information about the prevalence, genetic diversity and population structure of A. flavus in different …

Contributions In Puerto Rico To Bean, Phaseolus Spp., Research, James S. Beaver, Consuelo Estévez De Jensen, Phillip N. Miklas, Timothy G. Porch

United States Department of Agriculture-Agricultural Research Service / University of Nebraska-Lincoln: Faculty Publications

Most literature reviews focus on a specific topic. The purpose of this paper, however, is to review the contributions made by a multidisciplinary team of researchers at a specific location (Puerto Rico) over a period of several decades. This paper documents bean research of the University of Puerto Rico and the USDA-ARS Tropical Agriculture Research Station during the past century. The following illustrates the merits of continuity of effort in research and shows that research often follows a logical sequence of actions to solve problems related to genetic improvement as well as to study biotic and abiotic factors that affect …

Irrigated Pinto Bean Crop Stress And Yield Assessment Using Ground Based Low Altitude Remote Sensing Technology, Rakesh Ranjan, Abhilash K. Chandel, Lav R. Khot, Haitham Y. Bahlol, Jianfeng Zhou, Rick A. Boydston, Phillip N. Miklas

United States Department of Agriculture-Agricultural Research Service / University of Nebraska-Lincoln: Faculty Publications

The pinto bean is one of widely consumed legume crop that constitutes over 42% of the U.S dry bean production. However, limited studies have been conducted in past to assess its quantitative and qualitative yield potentials. Emerging remote sensing technologies can help in such assessment. Therefore, this study evaluates the role of ground-based multispectral imagery derived vegetation indices (VIs) for irrigated the pinto bean stress and yield assessments. Studied were eight cultivars of the pinto bean grown under conventional and strip tillage treatments and irrigated at 52% and 100% of required evapotranspiration. Imagery data was acquired using a five-band multispectral …

The Role Of Genotype And Production Environment In Determining The Cooking Time Of Dry Beans (Phaseolus Vulgaris L.), Karen A. Cichy, Jason A. Wiesinger, Matthew Berry, Susan Nchimbi‐Msolla, Deidre Fourie, Timothy G. Perch, Daniel Ambechew, Phillip N. Miklas

United States Department of Agriculture-Agricultural Research Service / University of Nebraska-Lincoln: Faculty Publications

Dry bean (Phaseolus vulgaris L.) is a nutrient‐dense food rich in proteins and minerals. Although a dietary staple in numerous regions, including Eastern and Southern Africa, greater utilization is limited by its long cooking time as compared with other staple foods. A fivefold genetic variability for cooking time has been identified for P. vulgaris, and to effectively incorporate the cooking time trait into bean breeding programs, knowledge of how genotypes behave across diverse environments is essential. Fourteen bean genotypes selected from market classes important to global consumers (yellow, cranberry, light red kidney, red mottled, and brown) were grown …

Suppression Of Aflatoxin Production In Aspergillus Species By Selected Peanut (Arachis Hypogaea) Stilbenoids, Victor S. Sobolev, R. S. Arias, Kerestin Goodman, Travis Walk, Valerie Orner, Paola C. Faustinelli, Alicia Massa

United States Department of Agriculture-Agricultural Research Service / University of Nebraska-Lincoln: Faculty Publications

Aspergillus flavus is a soil fungus that commonly invades peanut seeds and often produces carcinogenic aflatoxins. Under favorable conditions, the fungus-challenged peanut plant produces and accumulates resveratrol and its prenylated derivatives in response to such an invasion. These prenylated stilbenoids are considered peanut antifungal phytoalexins. However, the mechanism of peanut−fungus interaction has not been sufficiently studied. We used pure peanut stilbenoids arachidin-1, arachidin-3, and chiricanine A to study their effects on the viability of and metabolite production by several important toxigenic Aspergillus species. Significant reduction or virtually complete suppression of aflatoxin production was revealed in feeding experiments in A. flavus, …

Organ-Specific Transcriptome Profiling Of Metabolic And Pigment Biosynthesis Pathways In The Floral Ornamental Progenitor Species Anthurium Amnicola Dressler, Jon Suzuki, Teresita D. Amore, Bernarda Calla, Nathan A. Palmer, Erin D. Scully, Scott E. Sattler, Gautam Sarath, Joanne S. Lichty, Roxanna Y. Myers, Lisa M. Keith, Tracie K. Matsumoto, Scott M. Geib

United States Department of Agriculture-Agricultural Research Service / University of Nebraska-Lincoln: Faculty Publications

Anthurium amnicola Dressler possesses a number of desirable and novel ornamental traits such as a purple-colored upright spathe, profuse flowering, and floral scent, some of which have been introgressed into modern Anthurium cultivars. As a first step in identifying genes associated with these traits, the transcriptome from root, leaf, spathe, and spadix from an accession of A. amnicola was assembled, resulting in 28,019 putative transcripts representing 19,458 unigenes. Genes involved in pigmentation, including those for the metabolism of chlorophyll and the biosynthesis of carotenoids, phenylpropanoids, and flavonoids were identified. The expression levels of one MYB transcription factor was highly …

The Lx Report Of The Bean Improvement Cooperative No. 60, March 2017.

United States Department of Agriculture-Agricultural Research Service / University of Nebraska-Lincoln: Faculty Publications

CONTENTS

LX Annual Report of the Bean Improvement Cooperative xi

BIC Coordinating Committee Membership - 1957 to 2017 . xii

BIC Meritorious Service and Distinguished Achievement Award Recipients - 1957 to 2015 xiii

BIC Awards Nomination Request for 2017 xvi

BIC/NAPIA Meeting in 2017 . xix

In Memory of Guillermo E. Galvez-Enriquez xx

RESEARCH PAPERS FOR 2017

OPTIMIZING SPORULATION OF Pseudocercospora griseola IN VITRO • Paula F. de Pádua1, Rafael Pereira1, Luanna B. W. Gomes1 and Elaine A. de Souza1* 1

FINE MAPPING THE BROAD SPECTRUM ANTHRACNOSE RESISTANCE GENE IN AMENDOIM CAVALO 3 • Gilio, T.A.S.1, Oscar P. Hurtado-Gonzales2, Giseli …

Study Of The Genetic Diversity Of The Aflatoxin Biosynthesis Cluster In Aspergillus Section Flavi Using Insertion/Deletion Markers In Peanut Seeds From Georgia, Usa, Paola C. Faustinelli, Edwin R. Palencia, Victor S. Sobolev, Bruce W. Horn, Hank T. Sheppard, Marshall C. Lamb, Xinye M. Wang, Brian E. Scheffler, Jaime Martinez Castillo, Renee S. Arias

United States Department of Agriculture-Agricultural Research Service / University of Nebraska-Lincoln: Faculty Publications

Aflatoxins are among themost powerful carcinogens in nature. The major aflatoxin-producing fungi are Aspergillus flavus and A. parasiticus. Numerous crops, including peanut, are susceptible to aflatoxin contamination by these fungi. There has been an increased use of RNA interference (RNAi) technology to control phytopathogenic fungi in recent years. In order to develop molecular tools targeting specific genes of these fungi for the control of aflatoxins, it is necessary to obtain their genome sequences. Although high-throughput sequencing is readily available, it is still impractical to sequence the genome of every isolate. Thus, in this work, the authors proposed a workflow …

Characterization Of Small Rna Populations In Non-Transgenic Andaflatoxin-Reducing-Transformed Peanut, Imana L. Power, Phat M. Dang, Victor S. Sobolev, Valerie Orner, Joseph L. Powell, Marshall C. Lamb, Renée S. Arias

United States Department of Agriculture-Agricultural Research Service / University of Nebraska-Lincoln: Faculty Publications

Aflatoxin contamination is a major constraint in food production worldwide. In peanut (Arachis hypogaea L.), these toxic and carcinogenic aflatoxins are mainly produced by Aspergillus flavus Link and A. parasiticus Speare. The use of RNA interference (RNAi) is a promising method to reduce or prevent the accumula-tion of aflatoxin in peanut seed. In this study, we performed high-throughput sequencing of small RNApopulations in a control line and in two transformed peanut lines that expressed an inverted repeattargeting five genes involved in the aflatoxin-biosynthesis pathway and that showed up to 100% less aflatoxin B1 than the controls. The objective was …

Chemical Interruption Of Late Season Flowering To Improve Harvested Peanut Maturity, Marshall C. Lamb, Ronald B. Sorensen, Christopher L. Butts, Phat M. Dang, C. Y. Chen, Renée S. Arias

United States Department of Agriculture-Agricultural Research Service / University of Nebraska-Lincoln: Faculty Publications

Peanut (Arachis hypogaea) is a botanically indeterminate plant where flowering, fruit initiation, and pod maturity occurs over an extended time period during the growing season. As a result, the maturity and size of individual peanut pods vary considerably at harvest. Immature kernels that meet commercial edible size specifications negatively affect quality during processing due to their increased propensity for off flavors, higher moisture and water activity, and variable roasting properties. As peanuts progress toward maturation, late season flowers set within 40 days till harvest will not have sufficient time to develop into mature, marketable pods prior to harvest. …

Aspergillus And Aflatoxin In Groundnut (Arachis Hypogaea L.) And Groundnut Cake In Eastern Ethiopia, Abdi Mohammed, Alemayehu Chala, Mashilla Dejene, Chemeda Fininsa, David A. Hoisington, Victor S. Sobolev, R. S. Arias

United States Department of Agriculture-Agricultural Research Service / University of Nebraska-Lincoln: Faculty Publications

This study was conducted to assess major Aspergillus species and aflatoxins associated with groundnut seeds and cake in Eastern Ethiopia and evaluate growers’ management practices. A total of 160 groundnut seed samples from farmers’ stores and 50 groundnut cake samples from cafe and restaurants were collected. Fungal isolation was done from groundnut seed samples. Aspergillus flavus was the dominant species followed by Aspergillus parasiticus. Aflatoxin analyses of groundnut seed samples were performed using ultra performance liquid chromatography; 22.5% and 41.3% of samples were positive, with total aflatoxin concentrations of 786 and 3135 ng g⁻¹ from 2013/2014 and 2014/2015 …

Draft Genome Sequence Of Cercospora Arachidicola, Causal Agent Of Early Leaf Spot In Peanuts, Valerie A. Orner, Emily G. Cantowine, Xinye Monica Wang, Amr Abouelleil, James Bochicchio, Chad Nusbaum, Albert C. Culbreath, Zaid Abdo, Renee S. Arias

United States Department of Agriculture-Agricultural Research Service / University of Nebraska-Lincoln: Faculty Publications

Cercospora arachidicola, causal agent of early leaf spot, is an economically important peanut pathogen. Lack of genetic information about this fungus prevents understanding the role that potentially diverse genotypes may have in peanut breeding programs. Here, we report for the first time a draft genome sequence of C. arachidicola.

Efficacy And Costs Of Controlling Eastern Redcedar, John Ortmann, James L. Stubbendieck, Robert A. Masters, George H. Pfeiffer, Thomas B. Bragg

United States Department of Agriculture-Agricultural Research Service / University of Nebraska-Lincoln: Faculty Publications

(Juniperus virginiana L.) is reducing grassland productivity across much of the Great Plains. Control methods include broadcast prescribed fire, herbicides, cutting, and individual tree ignition. All methods have disadvantages when used alone. Fire can be ineffective against larger trees. Intensive methods can be too expensive for low-productivity grasslands. The objectives of this research were to determine the effects of broadcast prescribed fie alone as measured at 3 weeks after fire; to compare the effects of picloram herbicide application with or without fire, sawing with or without fire, and individual tree ignition with fire; and to compare all treatment costs. …

Productivity Of Well-Watered Panicum Virgatum Does Not Increase With Co2 Enrichment, Philip A. Fay, H. Wayne Polley, Virginia L. Jin, Michael J. Aspinwall

United States Department of Agriculture-Agricultural Research Service / University of Nebraska-Lincoln: Faculty Publications

Aims Rising atmospheric CO₂ has been shown to increase aboveground net primary productivity (ANPP) in water-limited perennial grasslands, in part by reducing stomatal conductance and transpiration, thereby reducing depletion of soil moisture. However, the benefits of CO₂ enrichment for ANPP will vary with soil type and may be reduced if water limitation is low. Little is known about CO₂ effects on ANPP of Panicum virgatum, a perennial C₄ tallgrass and potential bioenergy crop. We hypothesized that if water limitation is minimized, (i) CO₂ enrichmentwould not increase P. virgatum ANPP because photosynthetic rates of this C …

Trait Convergence And Plasticity Among Native And Invasive Species In Resource-Poor Environments, Rebecca E. Drenovsky, Albina Khasanova, Jeremy J. James

United States Department of Agriculture-Agricultural Research Service / University of Nebraska-Lincoln: Faculty Publications

Premise of study: Functional trait comparisons provide a framework with which to assess invasion and invasion resistance. However, recent studies have found evidence for both trait convergence and divergence among coexisting dominant native and invasive species. Few studies have assessed how multiple stresses constrain trait values and plasticity, and no study has included direct measurements of nutrient conservation traits, which are critical to plants growing in low-resource environments.

Methods: We evaluated how nutrient and water stresses affect growth and allocation, water potential and gas exchange, and nitrogen (N) allocation and use traits among a suite of six codominant species from …

Opportunities And Challenges From The Use Of Genomic Selection For Beef Cattle Breeding In Latin America, Hugo H. Montaldo, Eduardo Casas, José Bento Sterman Ferraz, Vicente E. Vega-Murillo, Sergio Iván Román-Ponce

United States Department of Agriculture-Agricultural Research Service / University of Nebraska-Lincoln: Faculty Publications

In 2009, Latin American countries had approximately 401 million cattle (29% of the world’s total cattle population) and produced 8.2 million tonnes of beef, equivalent to 29% of the world’s total production (FAO, 2011). Beef in Latin American countries is produced under widely differing climates (ranging from tropical to temperate), resources available (vegetation, food), types of markets, and genetic backgrounds of the animals. The main production systems are classified as beef and dual-purpose cattle. The genetic backgrounds of animals vary from purebred European (Bos taurus taurus) or Zebu (Bos taurus indicus) to crossbreeds (Figures 1 and …

Separation Of Alcohol Soluble Sorghum Proteins Using Non-Porous Cation-Exchange Columns, Deidre L. Blackwell, Scott R. Bean

United States Department of Agriculture-Agricultural Research Service / University of Nebraska-Lincoln: Faculty Publications

Kafirins, the storage proteins and major protein of the cereal grain sorghum, play an important nutritional role for millions of people in parts of Africa and Asia. Kafirins are non-water soluble, being soluble only in the presence of detergents or aqueous alcohol mixtures and are among the most hydrophobic of the cereal proteins. Limited M_w heterogeneity of kafirins reduces their resolution when separated by sodium dodecyl sulfate-polyacrylamide gel electrophoresis (SDS-PAGE). Charge based separation techniques have been shown to have improved resolution of kafirins, but due to the nature of their solubility, ion-exchange (IE)-HPLC has not been widely used to …

Spillover Of Functionally Important Organisms Between Managed And Natural Habitats, Eleanor J. Blitzer, Carsten F. Dormann, Andrea Holzschuh, Alexandra-Maria Klein, Tatyana A. Rand, Teja Tscharntke

United States Department of Agriculture-Agricultural Research Service / University of Nebraska-Lincoln: Faculty Publications

Land-use intensification has led to a landscape mosaic that juxtaposes human-managed and natural areas. In such human-dominated and heterogeneous landscapes, spillover across habitat types, especially in systems that differ in resource availability, may be an important ecological process structuring communities. While there is much evidence for spillover from natural habitats to managed areas, little attention has been given to flow in the opposite direction. This paper synthesizes studies published to date from five functionally important trophic groups, herbivores, pathogens, pollinators, predators, and seed dispersers, and discusses evidence for spillover from managed to natural systems in all five groups. For each …

Water Use And Yields Of No-Till Managed Dryland Grasspea And Yellow Pea Under Different Planting Configurations, F.J. Calderón, M.F. Vigil, D.C. Nielsen, J.G. Benjamin, D.J. Poss

United States Department of Agriculture-Agricultural Research Service / University of Nebraska-Lincoln: Faculty Publications

Grasspea (GP) (Lathyrus sativus) is a drought-tolerant legume that can be grown for forage and grain. It has potential value to be used as a nitrogen-fixing crop in dryland rotations with non-legume grain crops. However, the agronomy of GP for the Central Great Plains region have not been investigated. The objective of this research was to compare the grain and biomass yield, as well as N accumulation of GP relative to field pea (FP) in two planting configurations. We carried out a 3-year field experiment to compare dryland GP with Admiral yellow field pea (Pisum sativum) …

Characterization Of Sorghum Grain And Evaluation Of Sorghum Flour In A Chinese Egg Noodle System, Liman Liu, Thomas J. Herald, Donghai Wang, Jeff D. Wilson, Scott R. Bean, Fadi M. Aramouni

United States Department of Agriculture-Agricultural Research Service / University of Nebraska-Lincoln: Faculty Publications

Sorghum is a gluten free grain that has potential to be used as an alternative to wheat flour for the Celiac Sprue market. There are thousands of sorghum lines that have not been characterized for grain, flour or end product quality. The objective of the research was to gain an understanding among grain sorghum quality factors and Chinese egg noodles quality. Four sorghum hybrids were characterized and evaluated for kernel characteristics, proximate analysis, flour composition and end product in a Chinese egg noodle system. Kernel size and weight affected the flour particle size and the amount of starch damage. Flour …

Potential Causes And Consequences Of Decreased Body Size In Field Populations Of Coccinella Novemnotata, John Losey, Jordan Perlman, James Kopco, Samuel Ramsey, Louis Hesler, Edward Evans, Leslie Allee, Rebecca Smyth

United States Department of Agriculture-Agricultural Research Service / University of Nebraska-Lincoln: Faculty Publications

Coccinella novemnotata, the nine-spotted lady beetle, was historically one of the most common lady beetles across the US and southern Canada. In the 1980s it became extremely rare and has remained rare. In 2008 adult C. novemnotata were collected from field populations in Oregon and South Dakota and initial observations suggested that these individuals seemed smaller than the mean size of the species historically. These observations led to a series of experiments to determine if there had been significant decrease in size and if any decrease found was due to a genetic change or to environmental factors. In the …

Animal Foraging As A Mechanism For Sediment Movement And Soil Nutrient Development: Evidence From The Semi-Arid Australian Woodlands And The Chihuahuan Desert, David J. Eldridge, Terry B. Koen, Aaron Killgore, Niki Huang, Walter G. Whitford

United States Department of Agriculture-Agricultural Research Service / University of Nebraska-Lincoln: Faculty Publications

An emerging area of interest in geomorphology over the past two decades has been the effects of biota on ecosystemprocesses.We examinedthe roles of a rangeof vertebrates onsoildisturbance in twomarkedlydifferent environments, the semi-arid woodland of eastern Australia and a Chihuahuan Desert grassland–shrubland in the south-westernUnited States. Foraging pits of soil-disturbingvertebrates variedmarkedly fromsmall scratchings of heteromyid (mainly Dipodomys spp.) rodents (1.8×10⁻⁴m³) to deep (1.0×10⁻² m³) excavations of the burrowing bettong (Bettongia leuseur) and greater bilby (Macrotis lagotis). Vertebratesmoved substantial volumes of soil in both environments, and activity was highly temporally and …

Transcriptome And Gene Expression Analysis In Cold-Acclimated Guayule (Parthenium Argentatum) Rubber-Producing Tissue, Grisel Ponciano, Colleen M. Mcmahan, Wenshuang Xie, Gerard R. Lazo, Terry A. Coffelt, Jillian Collins-Silva, Aise Nural-Taban, Martin Gollery, David K. Shintani, Maureen C. Whalen

United States Department of Agriculture-Agricultural Research Service / University of Nebraska-Lincoln: Faculty Publications

Natural rubber biosynthesis in guayule (Parthenium argentatum Gray) is associated with moderately cold night temperatures. To begin to dissect the molecular events triggered by cold temperatures that govern rubber synthesis induction in guayule, the transcriptome of bark tissue, where rubber is produced, was investigated. A total of 11,748 quality expressed sequence tags (ESTs) were obtained. The vast majority of ESTs encoded proteins that are similar to stress-related proteins, whereas those encoding rubber biosynthesis- related proteins comprised just over one percent of the ESTs. Sequence information derived from the ESTs was used to design primers for quantitative analysis of the …

Modifying Crops To Increase Cell Wall Digestibility, Hans-Joachim G. Jung, Deborah A. Samac, Gautam Sarath

United States Department of Agriculture-Agricultural Research Service / University of Nebraska-Lincoln: Faculty Publications

Improving digestibility of roughage cell walls will improve ruminant animal performance and reduce loss of nutrients to the environment. The main digestibility impediment for dicotyledonous plants is highly lignified secondary cell walls, notably in stem secondary xylem, which become almost non-digestible. Digestibility of grasses is slowed severely by lignification of most tissues, but these cell walls remain largely digestible. Cell wall lignification creates an access barrier to potentially digestible wall material by rumen bacteria if cells have not been physically ruptured. Traditional breeding has focused on increasing total dry matter digestibility rather than cell wall digestibility, which has resulted in …

Post-Biological Control Invasion Trajectory For Melaleuca Quinquenervia In A Seasonally Inundated Wetland, Philip W. Tipping, Melissa R. Martin, Ryan Pierce, Ted D. Center, Paul R. Pratt, Min B. Rayamajhi

United States Department of Agriculture-Agricultural Research Service / University of Nebraska-Lincoln: Faculty Publications

The recruitment and mortality of Melaleuca quinquenervia seedlings were evaluated over a 3-year period in a seasonally inundated wetland in the western Everglades region. The mean (±SE) density of seedlings/ saplingsm^-1 declined from 64.8 (±4.5) to 0.5 (±0.2) over the 3 years, a population reduction of 99.2%. Four distinct water regimes characterized this site: dry, dry to wet transition, flooded, and wet to dry transition. Seedling recruitment was highest in the dry to wet transition and lowest in the flooded water regime, while mortality was highest under flooded and dry water regimes. The mean estimate of population growth (λ) …