Life Sciences Commons^™

Using Low-Fix Rate Gps Telemetry To Expand Estimates Of Ungulate Reproductive Success, Nathan D. Hooven, Kathleen E. Williams, John T. Hast, Joseph R. Mcdermott, R. Daniel Crank, Gabe Jenkins, Matthew T. Springer, John J. Cox

Forestry and Natural Resources Faculty Publications

Background

Population parameters such as reproductive success are critical for sustainably managing ungulate populations, however obtaining these data is often difficult, expensive, and invasive. Movement-based methods that leverage Global Positioning System (GPS) relocation data to identify parturition offer an alternative to more invasive techniques such as vaginal implant transmitters, but thus far have only been applied to relocation data with a relatively fine (one fix every  < 8 h) temporal resolution. We employed a machine learning method to classify parturition/calf survival in cow elk in southeastern Kentucky, USA, using 13-h GPS relocation data and three simple movement metrics, training a random forest on cows that successfully reared their calf to a week old.

Results

We developed a decision rule based upon a predicted probability threshold across individual cow time series, accurately classifying 89.5% (51/57) of cows with a known reproductive status. When used to infer status of …

Understanding The Decline In Successful Cattle Pregnancies, Andre Tu Nguyen

Research on Capitol Hill

USU junior Andre, a local Loganer, studies computer science and biology.He has been working in an animal science lab. Over time, we have seen a decline in successful dairy cattle pregnancies. This is a huge cause for concern for Utah, with milk sales at an estimated value of $405 million in 2020. Andre’s work has been in studying a certain protein in pregnant cattle; now that he has determined there is a decrease in this protein over the course of the pregnancy, he hopes to see whether that might impact its viability. Andre got involved in research in a high …

Latitudinal Variation In Monthly-Scale Reproductive Synchrony Among Acropora Coral Assemblages In The Indo-Pacific, Jessica Bouwmeester, Alasdair J. Edwards, James R. Guest, Andrew G. Bauman, Michael L. Berumen, Andrew H. Baird

Marine & Environmental Sciences Faculty Articles

Early research into coral reproductive biology suggested that spawning synchrony was driven by variations in the amplitude of environmental variables that are correlated with latitude, with synchrony predicted to break down at lower latitudes. More recent research has revealed that synchronous spawning, both within and among species, is a feature of all speciose coral assemblages, including equatorial reefs. Nonetheless, considerable variation in reproductive synchrony exists among locations and the hypothesis that the extent of spawning synchrony is correlated with latitude has not been formally tested on a large scale. Here, we use data from 90 sites throughout the Indo-Pacific and …

Der Kormoran Phalacrocorax Carbo In Der Mongolei, Michael Stubbe, Lucie Marie Baltz, Davaa Lchagvasuren, Lukas Kratzsch, Lara-Sophie Dey, Annegret Stubbe

Erforschung biologischer Ressourcen der Mongolei / Exploration into the Biological Resources of Mongolia, ISSN 0440-1298

The Great Cormorant Phalacrocorax carbo is a wide spread breeding species in Mongolia with a progressive population trend. Observations of the Mongolian-German Biological Expeditions were analyzed and summarized with data from literature. About 1,500 young birds were ringed in 2016 and 2017. One important recovery was coming from the wintering area Mai Po Marshes Nature Reserve of Hong Kong. It is unclear if all Mongolian Cormorants are flying at the same route to their wintering region in South China. The main feeding fishes in Mongolia belong to endemic species of the genus Oreoleuciscus (Cyprinidae). Measurements of 113 eggs from Tolbo- …

Mist-Netting Of Forest-Dwelling Bats In The Lazovsky State Nature Reserve, Russian Far East, Kerstin Birlenbach

Erforschung biologischer Ressourcen der Mongolei / Exploration into the Biological Resources of Mongolia, ISSN 0440-1298

Many bat species depend on a high value of healthy and undisturbed forests with a high ratio of roost sites in old tree stands. This investigation focused on the diversity, distribution and reproduction status of bats within the area of Lazovsky State Nature Reserve. The importance of an area for bats can be measured by the ratio of reproduction. The most important and sensitive time in a bats yearly circle is the time of hibernation in winter and the reproduction time of females. From the beginning of July to the end of August 2007, in total 139 bats of eight …

Surgical Sterilization Impacts On Behavior Of Coyote Pairs, Tyler Leary, Jeffrey T. Schultz, Julie K. Young

USDA Wildlife Services: Staff Publications

Coyotes (Canis latrans) involved in depredation of livestock, an act frequently resulting in human-wildlife conflict, often do so out of necessity for provisioning pups. Surgical sterilization methods such as vasectomy that preserve gonadal hormones have been successful in reducing depredation by free-ranging coyotes while allowing individuals to maintain territoriality and mate fidelity. However, use of these methods remain costly and ineffective for wide-scale use. Given the alternative proposal of using chemical sterilization techniques, we investigated whether the use of hormone-altering sterilization methods impacted behavior of captive coyote pairs (i.e., male-female pair bonds). Our objective was to evaluate behavior …

Measuring Adrenal And Reproductive Hormones In Hair From Southern Beaufort Sea Polar Bears (Ursus Maritimus), Marilize Van Der Walt, Lorin A. Neuman-Lee, Patricia A. Terletzky, Todd C. Atwood, Eric M. Gese, Susannah S. French

USDA Wildlife Services: Staff Publications

Polar bears (Ursus maritimus) use sea ice to access marine mammal prey. In Alaska’s Southern Beaufort Sea, the declining availability of sea ice habitat in summer and fall has reduced opportunities for polar bears to routinely hunt on the ice for seals, their primary prey. This reduced access to prey may result in physiological stress with subsequent potential consequences to reproductive function (physiological changes that accompany reproduction), which can be measured via reproductive hormones. Hormone concentrations in hair can be used as a minimally invasive alternative to serum concentrations, which must come from animal captures. Hair samples also …

Reproductive Trade-Offs In The Colorado Checkered Whiptail Lizard (Aspidoscelis Neotesselatus): An Examination Of The Relationship Between Clutch And Follicle Size, Hannah E. Caracalas, S. S. French, S. B. Hudson, B. M. Kluever, A. C. Webb, D. Eifler, A. J. Lehmicke, Lise M. Aubry

USDA Wildlife Services: Staff Publications

Life history theory predicts that there should be an inverse relationship between offspring size and number, because individuals cannot simultaneously maximize both when resources are limited. Although extensively studied in avian species, the occurrence and determinants of reproductive tradeoffs in oviparous reptiles are far less understood, particularly in parthenogenetic species. We studied this trade-off in the Colorado Checkered Whiptail, Aspidoscelis neotesselatus, a female-only parthenogenetic lizard. Using data previously collected in 2018 and 2019, we tested for clutch and egg size trade-offs and determined whether this relationship could be influenced by female size and aspects of physiological condition. Physiological condition …

Kelp-Associated Microbes Facilitate Spatial Subsidy In A Detrital-Based Food Web In A Shoreline Ecosystem, Charu Lata Singh, Megan J. Huggett, Paul S. Lavery, Christin Säwström, Glenn A. Hyndes

Research outputs 2014 to 2021

Microbes are ubiquitous but our knowledge of their effects on consumers is limited in benthic marine systems. Shorelines often form hotspots of microbial and detritivore activity due to the large amounts of detrital macrophytes that are exported from other coastal ecosystems, such as kelp forests, and accumulate in these systems. Shoreline ecosystems therefore provide a useful model system to examine microbial-detritivore interactions. We experimentally test whether bacteria in the biofilm of kelp provide a bottom-up influence on growth and reproductive output of detritivores in shorelines where detrital kelp accumulates, by manipulating the bacterial abundances on kelp (Ecklonia radiata). The growth …

Reproductive Ecology Of Dragonfishes (Stomiiformes: Stomiidae) In The Gulf Of Mexico, Alex Marks, David Kerstetter, David Wyanski, Tracey Sutton

Marine & Environmental Sciences Faculty Articles

The most abundant fishes on Earth live in the meso- and bathypelagic (deep-pelagic, collectively) zones of the open ocean, where they play a key role in deep-sea food webs by mediating energy flow from surface waters to great depth. Of these fishes, the most speciose taxon is the family Stomiidae (dragonfishes). Despite being the numerically dominant predators of the global mesopelagic zone, stomiid reproductive ecology is poorly known. Research surveys rarely catch larger adults, impeding reproductive ecology studies. Between 2010 and 2011, the Offshore Nekton Sampling and Analysis Program sampled the Gulf of Mexico using a research-sized, opening/closing trawl (10-m …

Competing Reproductive And Physiological Investments In An All‑Female Lizard, The Colorado Checkered Whiptail, Lise M. Aubry, Spencer B. Hudson, Bryan M. Kluever, Alison C. Webb, Susannah S. French

USDA Wildlife Services: Staff Publications

Organisms in the wild have to allocate limited resources towards competing functions such as reproduction, growth, and self-maintenance. These competing investments create significant changes in physiological activity, and we still know little about the relationship between physiological activity and reproductive investment in natura. We investigated trade-offs between physiological activity and reproductive investment in the parthenogenetic Colorado checkered whiptail, Aspidoscelis neotesselata, across three different sites at the US Army Fort Carson Military Installation near Colorado Springs, CO, through-out the reproductive season in 2018 and 2019. We measured clutch size and reproductive activity and quantified plasma corticosterone (CORT), reactive oxygen metabolites (ROMs), …

Reproduction And Dispersal Of Biological Soil Crust Organisms, Steven D. Warren, Larry L. St. Clair, Lloyd R. Stark, Louise A. Lewis, Nuttapon Pombubpa, Tania Kurbessoian, Jason E. Stajich, Zachary T. Aanderud

Life Sciences Faculty Research

Biological soil crusts (BSCs) consist of a diverse and highly integrated community of organisms that effectively colonize and collectively stabilize soil surfaces. BSCs vary in terms of soil chemistry and texture as well as the environmental parameters that combine to support unique combinations of organisms—including cyanobacteria dominated, lichen-dominated, and bryophyte-dominated crusts. The list of organismal groups that make up BSC communities in various and unique combinations include—free living, lichenized, and mycorrhizal fungi, chemoheterotrophic bacteria, cyanobacteria, diazotrophic bacteria and archaea, eukaryotic algae, and bryophytes. The various BSC organismal groups demonstrate several common characteristics including—desiccation and extreme temperature tolerance, production of various …

Cyanobacteria Reduce Quagga Mussel (Dreissena Rostriformis Bugensis) Spawning And Fertilization Success, Anna G. Boegehold, Nicholas S. Johnson, Jeffrey L. Ram, Donna R. Kashian

Environmental Science and Geology Faculty Research Publications

Quagga mussels (Dreissena rostriformis bugensis) are highly fecund broadcast spawners invasive to freshwaters of North America and western Europe. We hypothesized that environmental cues from phytoplankton can trigger gamete release in quagga mussels. Nutritious algae may stimulate dreissenid spawning, but less palatable food, such as bloom-forming cyanobacteria, could be a hindrance. The objective of our study was to test whether exposure to cyanobacteria can inhibit quagga mussel spawning and fertilization. We assessed spawning in the presence of serotonin, a known spawning inducer, where adult quagga mussels placed in individual vials were exposed to 13 cyanobacteria cultures and purified algal toxin …

Multiple Mating By Females In The Chesapeake Bay Blue Crab Callinectes Sapidus Population, S. Wells, J. Mcconaugha, L. Horth

OES Faculty Publications

Mature females of the Chesapeake Bay (USA) blue crab Callinectes sapidus population mate multiple times. Microsatellite DNA analysis of sperm stored in the spermathecae has shown that virtually all (~97%, 104 out of 107) females collected in a 2009−2010 study mated with at least 2 males. Enumeration of stored sperm revealed that despite multiple mating, some females did not have enough sperm to fulfill their lifetime reproductive potential, suggesting that female blue crabs may experience varying levels of sperm limitation. This could result from multiple factors. The average body size of males in the population has decreased, which reduces the …

Reproductive Characteristics Of Landlocked Fall Chinook Salmon From Lake Oahe, South Dakota, Kelsen L. Young, Michael E. Barnes, Jeremy L. Kientz

The Prairie Naturalist

Lake Oahe, South Dakota, USA, landlocked fall Chinook salmon (Oncorhynchus tshawytscha) reproductive characteristics were examined over a 27 year period, from 1988 to 2015. Mean total lengths of spawning females ranged from 665 mm (1995) to 812 mm (2015) with considerable year-to-year variation. Post-spawn female weights varied, ranging from 2.02 kg (2000) to 5.55 kg (2015), with an overall mean of 3.04 kg. Fecundity peaked at 4,555 eggs per female in 2003, which was just 3 years after a low of 2,011 eggs per female in 2000. Relative fecundity based on female weight was greatest at 1,211 eggs/kg …

Mate Choice In Temperate And Tropical Spiny Lobsters With Contrasting Reproductive Systems, Mark Butler Iv, Rodney Bertelsen, Alison Macdiarmid

Biological Sciences Faculty Publications

Sperm limitation of reproductive success is common in decapod crustaceans, favouring mating systems in which females compete for large males of high reproductive value. We investigated these phenomena in two species of spiny lobsters—one temperate, one tropical—with contrasting reproductive systems: the Southern Rock Lobster (Jasus edwardsii) and the Caribbean Spiny Lobster (Panulirus argus). We hypothesized that female mate selection should be more pronounced in the temperate J. edwardsii than in the tropical P. argus because J. edwardsii matures later, has a shorter mating season, and produces just one clutch of eggs per year that benefit from …

The Effect Of Parental Size On Spermatophore Production, Egg Quality, Fertilization Success, And Larval Characteristics In The Caribbean Spiny Lobster, Panulirus Argus, Mark J. Butler Iv, Alison Macdiarmid, Gaya Gnanalingam

Biological Sciences Faculty Publications

The average size of spiny lobsters (Decapoda; Palinuridae) has decreased worldwide over the past few decades. Market forces coupled with minimum size limits compel fishers to target the largest individuals. Males are targeted disproportionately as a consequence of sexual dimorphism in spiny lobster size (i.e. males grow larger than females) and because of protections for ovigerous females. Therefore, overexploitation of males has led to sperm limitation in several decapod populations with serious repercussions for reproductive success. In the Caribbean spiny lobster, Panulirus argus, little is known about the effect of reduced male size on fertilization success or the role …

Reproductive Phase Determination In Male Meagre (Argyrosomus Regius, Sciaenidae): Testis Development And Histologic Corroboration Of A Gross Anatomical Scale, Nuno Prista, Leonel Gordo, José Lino Costa, Maria José Costa, Cynthia Jones

OES Faculty Publications

Reproductive stage determination of male gonads has received sparse attention in fish biology literature with few studies detailing the building of gross anatomical- and histologic scales. The meagre (Argyrosomus regius) is one of the world's largest sciaenids and supports a significant regional fishery in European and North African waters whose reproductive patterns are yet to be fully investigated. In the present study, we derive a macroscopic grading system for meagre testis using semi-quantitative graphs that feature the testis variability along the species size range and time of the year. We then describe the histological stages and reproductive phases of male …

Reproduction And Population Characteristics Of White-Tailed Jackrabbits In South Dakota, Charles Dieter, Dustin Schaible

Great Plains Research: A Journal of Natural and Social Sciences

We evaluated the reproductive biology of314 white-tailed jackrabbits (Lepus townsendii) in 44 counties throughout South Dakota from June 2004 to September 2005. We classified jackrabbits as juveniles or adults based on the closure of the proximal epiphysis of the humerus using X-ray analysis. We determined annual reproductive activity through fluctuations in measured weights of reproductive organs for both sexes. The 2005 breeding season started in late February and proceeded until mid-July, approximately 142 days, allowing for females to potentially produce 3.3 litters. We found four distinct breeding periods by the overlap of estimated conception and parturition dates. Mean …

Long-Term Ecology Of Asiatic Wild Ass (Equus H. Hemionus Pallas) In Central Asia, Annegret Stubbe, Michael Stubbe, Nyamsuren Batsaikhan, Ravčigijn Samjaa

Erforschung biologischer Ressourcen der Mongolei / Exploration into the Biological Resources of Mongolia, ISSN 0440-1298

The main population of the nominate form Equus hemionus hemionus Pallas, 1775 occurs in the south-east Gobi desert of Mongolia. From 2003 to 2012 we studied the reproductive ecology and mortality of dschiggetajs or khulans (English also ‘hulan’). During these years, the rate of reproduction was variable, ranging from 6.4% to 23.0% depending on climate, feeding conditions, and fitness of the mares. Our research shows that there appears to be a relationship between minimum temperatures in June (main foaling time) and rate of successful reproduction. The primary cause of decline in the numerical density of the population of E. hemionus …

Inferring Viral Quasispecies Spectra From 454 Pyrosequencing Reads, Irina Astrovskaya, Bassam Tork, Serghei Mangul, Kelly Westbrooks, Ion Măndoiu, Peter Balfe, Alexander Zelikovskiy

Computer Science Faculty Publications

Background: RNA viruses infecting a host usually exist as a set of closely related sequences, referred to as quasispecies. The genomic diversity of viral quasispecies is a subject of great interest, particularly for chronic infections, since it can lead to resistance to existing therapies. High-throughput sequencing is a promising approach to characterizing viral diversity, but unfortunately standard assembly software was originally designed for single genome assembly and cannot be used to simultaneously assemble and estimate the abundance of multiple closely related quasispecies sequences.

Results: In this paper, we introduce a new Viral Spectrum Assembler (ViSpA) method for quasispecies spectrum reconstruction …

Paddlefish Egg Deposition In The Lower Yellowstone River, Montana And North Dakota, Shannon E. Miller, Dennis L. Scarnecchia, Steven R. Fain

The Prairie Naturalist

We used passive egg collectors during May, June, and July of2003 and 2004 in the lower 50 river kiiometers (rkm) of the Yellowstone River, eastern Montana and western North Dakota, to detect egg deposition by spawning paddle fish (Polyodon spathula). Sampling yielded 292 eggs (46 in 2003 and 246 in 2004). All egg collections in 2003 occurred on the descending limb of the spring hydrograph but 99% of egg collections in 2004 occurred before the spring hydrograph began to descend. Catch-per-unit-effort (CPUE) in 2004 was about four times that of 2003. A combination of river conditions, in addition …

Sheep Updates 2007 - Part 4, Dean Thomas, Dominique Blache, Dean Revell, Hayley Norman, Phil Vercoe, Zoey Durmic, Serina Digby, Di Mayberry, Megan Chadwick, Martin Sillence, David Masters, R. Silberstein, F. Byrne, P. G. H. Nichols, J. Young, L. Aitkins, M. G. Wilmot, A. J. Rintoul, T. Lambert, D. R. Mcclements, P. Raper, P. Ward, C. Walton, T. York, David Pethick, David Hopkins, Malcolm Mcphee, D. B. Savage, J. V. Nolan, I. R. Godwin, A. Aoetpah, T. Nguyen, N. Baillie, C. Lawler, Ken Geenty, John Smith, Darryl Smith, Tim Dyall, Grant Uphill, John Young, Michael Paton, John Dorrian

Sheep Updates

This session covers eight papers from different authors:

GRAZING

1. The impact of high dietary salt and its implications for the management of livestock grazing saline land, Dean Thomas, Dominique Blache, Dean Revell, Hayley Norman, Phil Vercoe, Zoey Durmic, Serina Digby, Di Mayberry, Megan Chadwick, Martin Sillence and David Masters, CRC for Plant-based Management of Dryland Salinity, Faculty of Natural & Agricultural Sciences, The University of Western Australia, WA.

2. Sustainable Grazing on Saline Lands - outcomes from the WA1 research project, H.C. Norman^1,2, D.G. Masters^1,2, R. Silberstein^1,2, F. Byrne^2,3, P.G.H. Nichols …

Hydrodynamic Regulation Of Reproduction In Fucoid Algae: A Regional Model And Consequences For Population Structure, Susan H. Brawley

University of Maine Office of Research Administration: Grant Reports

Fucoid algae dominate most rocky shores across the north Atlantic and contribute substantially to structuring of the coastal ecosystem. Reproduction in fucoid algae is sensitive to hydrodynamic conditions, resulting in high fertilization success because gamete release occurs only under calm conditions. These findings have important implications for asynchrony in gamete release between populations and the scale of population isolation. This study will 1) test a nascent model describing when successful fucoid reproduction can occur, 2) determine whether hybridization between Fucus vesiculosus and other fucoid algae occurs when gamete release is delayed by turbulent conditions, and 3) analyze whether genetic differentiation …

Day 2: Thursday, 18 August 2005: Colorado Native Aquatic Species Restoration Program, Dave Schnoor

Endangered Species Act Congressional Field Tour (August 17-19)

6 pages (includes illustrations).

Contains one reference.

Day 2: Thursday, 18 August 2005: Candidate Conservation Agreements And Collaborative Multi-Party Agreements, Al Pfister, Gary Skiba, Tim Lehmann

Endangered Species Act Congressional Field Tour (August 17-19)

8 pages (includes illustrations and maps).

Contains references.

Reproductive Ecology Of Two Common Woody Species, Juniperus Sabina And Artemisia Santolinifolia, In Mountain Steppes Of Southern Mongolia, Katrin Ronnenberg

Erforschung biologischer Ressourcen der Mongolei / Exploration into the Biological Resources of Mongolia, ISSN 0440-1298

The present study describes the reproductive ecology of the prostrate shrub Juniperus sabina and the dwarf shrub Artemisia santolinifolia in dry mountain steppes of southern Mongolia. Whereas stands of the juniper are located at the drought limit of the genus’ distributional range, the genus Artemisia is typical of central Asian drylands. Both species produce large numbers of reproductive organs. For Juniperus sabina, however, only 2.5% of the morphologically intact seeds were found to be viable. Correspondingly, neither seedlings nor saplings were found in the field, and recruitment by reseeding happens at most rarely under the present climatic conditions.

Instead, …

Zur Populationsökologie Und Raumnutzung Der Steppenwühlmaus Microtus Brandti (Radde, 1861) In Der Fortpflanzungsperiode, Ulrich Zöphel, N. Dawaa

Erforschung biologischer Ressourcen der Mongolei / Exploration into the Biological Resources of Mongolia, ISSN 0440-1298

During the growing season between 1988 and 1990 the population biology of Brandt’s vole (Microtus brandti) was observed in a population near Ulaanbaatar. Mark-recapture techniques (1,438 markings, 19,606 recaptures in total) and complementary methods were used. The density maximum was observed in July with 98 (1988); 169 (1989) and 94 (1990) individuals/ha and the population fluctuated by a factor of 7.4.

At the beginning of reproductive period the males disperse over a minimum distance of one female home range whereas the females do not migrate after winter. The typical mating system is promiscuity. Youngsters have been recorded from …

Das Arteninventar Der Avifauna Der Mongolei Während Einer Nord-Süd-Durchquerung 1997, Tobias Stenzel, Michael Stubbe, R. Samjaa, Annegret Stubbe, C. Dulamsuren

Erforschung biologischer Ressourcen der Mongolei / Exploration into the Biological Resources of Mongolia, ISSN 0440-1298

Here we present a detailed report on bird biodiversity of ecosystems along a North-South transect through Mongolia in 1997whic h serves as a guideline for further research projects and training for students in all Mongolian vegetation zones from northern steppes to southern deserts.

Two hundred fifty-five bird species were observed between 21st of July and 10th of August 1997. The main study sites were located in the North the Selenge-Orchon-basin with meadows and dune woodlands 15 km southern from Suchbaatar, the Middle Gobi-Aimag with desert steppes and sajrs (covered with Ulmus pumila) and in the Bordzongijn-gobi in the South …

First Results Of Wild Ass Research In The South Gobi Aymag/Mongolia In 2003 And 2004, Annegret Stubbe, Michael Stubbe, N. Batsajchan, R. Samjaa, S. Doržderem

Erforschung biologischer Ressourcen der Mongolei / Exploration into the Biological Resources of Mongolia, ISSN 0440-1298

The population of the Mongolian wild ass belongs to the nominate form Equus hemionus hemionus described by Pallas in 1775. This species is adapted to semidesert habitats in the Gobi region and is listed in the Red Book of Mongolia as well as on appendix I of the Washington Convention (CITES). Mapping of the northern border of the distributional range showed a remarkable decrease in size in comparison to the maps of Murzaev (1954) or Bannikov (1954). The pressure of civilization, settlements, motorization, and increasing numbers of domestic livestock in connection with the occupation of water resources and illegal hunting …