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Full-Text Articles in Life Sciences

How To Impress: Coordinating A Large Video Data Set For A Collaborative Project, Noah-Kee Marks, Rita Dawod Jul 2016

How To Impress: Coordinating A Large Video Data Set For A Collaborative Project, Noah-Kee Marks, Rita Dawod

DePaul Discoveries

Though many different research methods involve mass quantities of video/audio data, there is little discussion of best practices for organization, especially when the research is collaborative. The guidelines we provide here were created while conducting educational research on the IMPRESS project, an integrated metacognitive program for at risk STEM majors at Rochester Institute of Technology (RIT). Our hope is to encourage large-scale, collaborative research of qualitative video data by using our project as an example and providing enough information for readers to make a judgment on the efficacy of this process for their own projects.


Wavelet Packet Analysis Of Amino Acid Chain Sequences In The Proteins Of Mesophile And Thermophile Bacteria, John B. Linehan Jul 2016

Wavelet Packet Analysis Of Amino Acid Chain Sequences In The Proteins Of Mesophile And Thermophile Bacteria, John B. Linehan

DePaul Discoveries

In this project, proteins from mesophile and thermophile bacteria with similar functions are compared. Initially it is assumed that the differences between these two bacteria are substantial to be recognized in the amino acid sequences of their proteins. These differences would then lead to the creation of a statistical measure, which would allow the classification of a protein to its corresponding bacteria. By assigning hydrophobicity values from three well-known scales, a discrete numeric signal is produced for each protein, which is analyzed using wavelet packets. The result of this method indicates that the overall hydrophobic tendencies of these two bacteria’s …


Greenhouse Gas Flux Response To Harvest Of Typha X Glauca In A Great Lakes Coastal Wetland, Olivia Johnson Jul 2016

Greenhouse Gas Flux Response To Harvest Of Typha X Glauca In A Great Lakes Coastal Wetland, Olivia Johnson

DePaul Discoveries

Although harvesting invasive species can promote biodiversity during wetlands restoration, there is little known about this mechanical treatment’s impacts on greenhouse gas flux, a significant biosphere-atmosphere interaction. We quantified greenhouse gas flux response to experimental harvest of invasive cattail (Typha x glauca) at Cheboygan Marsh in Northeastern Michigan during the 2015 growing season. During each sampling campaign (July 15, July 31, August 12) we collected gas samples from static PVC chambers at 6 harvest and adjacent Typha control plots. Using gas chromatograph analysis, we found no significant difference in CH4 or CO2 flux between harvest and control plots on any …


Combinatory Effect Of Changing Co2, Temperature, And Long-Term Growth Temperature On Isoprene Emissions, Michael Cole Jul 2016

Combinatory Effect Of Changing Co2, Temperature, And Long-Term Growth Temperature On Isoprene Emissions, Michael Cole

DePaul Discoveries

Isoprene, the most abundant hydrocarbon in the atmosphere, plays a significant role in atmospheric chemistry. Its reactions with NOx lead to the formation of ozone in the lower troposphere, which is harmful to plants and detrimental to human health. As air temperatures and CO2 concentrations increase with climate change, it is uncertain how isoprene emissions from plants will respond. We hypothesized that isoprene emissions will increase with the combination of increasing temperature and CO­2 concentrations. We predict that oaks grown at a higher temperature will exhibit an increase in isoprene emissions with combined short-term increases in temperature …


Implications Of Manipulations Of Soil Quality On The Growth Of European Buckthorn (Rhamnus Cathartica) In A Greenhouse, Sam L. Pepper, Liam Heneghan Jul 2016

Implications Of Manipulations Of Soil Quality On The Growth Of European Buckthorn (Rhamnus Cathartica) In A Greenhouse, Sam L. Pepper, Liam Heneghan

DePaul Discoveries

European buckthorn (Rhamnus cathartica L.) is an invasive shrub that is capable of changing the nitrogen content of a soil through the deposition of its nitrogen rich leaf litter. This change creates conditions that may favor recolonizing by buckthorn and negatively affect the growth of native plants. In this greenhouse experiment, we examined the effect of altering soil quality by adding mulch comprised of buckthorn wood on above and belowground biomass, stem length and leaf production of buckthorn saplings. We found that buckthorn saplings planted in buckthorn mulch had reduced stem length and leaf production compared to growth in …


The Correlation Between Basal Isoprene Emissions And Climate Of The Native Range Across Oak Species, Mary J. Babiez Jul 2016

The Correlation Between Basal Isoprene Emissions And Climate Of The Native Range Across Oak Species, Mary J. Babiez

DePaul Discoveries

Isoprene is a biogenic volatile organic compound that is emitted by various plant species and plays an important role in the chemistry of the atmosphere. When it reacts with pollutants in the air, such as nitrogen oxides, the precursor to ozone (O3) is formed. In this experiment, we measured leaf emissions from 20 different oak species at the Morton Arboretum (Lisle, Illinois). The aim was to better understand differences in isoprene emissions across oak species. Since emissions have been found to protect leaves against brief periods of heat stress, we hypothesized that oaks native to areas with greater …