Life Sciences Commons^™

Functional Characterization Of The Newly Discovered Type V Crispr-Cas Protein Cas12a2, Dylan J. Keiser

All Graduate Theses and Dissertations, Spring 1920 to Summer 2023

Similarly to people, bacteria are under the treat of infection by viruses. To circumvent these threats, bacteria evolve complex immune systems. Our understanding of some of these immune systems has led to many advancements in the field of Biotechnology including tools that made expressing proteins for study in a lab easier, tools that revolutionized the feasibility of gene editing, and tools that could change the way we think about viral diagnostics and cancer therapeutics. A certain type of immune system that bacteria use to fight virus is called a CRISPR system. Presented here is work to understand the function of …

A Bayesian Hierarchical Approach For Modeling Virtual Species With Realistic Functional Trait Relationships, Sarah Bogen

All Graduate Plan B and other Reports, Spring 1920 to Spring 2023

Understanding the spatial and temporal dynamics of plant populations has important implications for the fields of ecology and conservation. A rich body of mathematical modeling approaches, including reaction-diffusion equations and integrodifference equations, have been developed to mechanistically model population spread based on species demography and seed dispersal characteristics. However, with over 390,000 plant species on Earth, it is not feasible to collect complete information on all species for the purpose of drawing generalized conclusions. One means of overcoming such a problem is through trait-based modeling, which seeks to represent realistic combinations of organismal traits rather than focusing on individual species. …

Quantification Of Hydrologic Response To Forest Disturbance In Western U.S. Watersheds, Sara A. Goeking

All Graduate Theses and Dissertations, Spring 1920 to Summer 2023

Forested watersheds produce more than half of the water supply in the United States. Forests affect how precipitation is partitioned into available water versus evapotranspiration. This dissertation investigated how water yield and snowpack responded to forest disturbance following recent disturbances in western U.S. forests during the period 2000-2019.

Chapter 2 systematically reviewed 78 recent studies that examined how water yield or snowpack changed after forest disturbances. Water yield and snowpack often increased after disturbance, but decreased in some circumstances. Decreased water yield was most likely to occur following disturbances that did not remove the entire forest canopy. It was also …

Comparing Fecal Dna Capture-Recapture Methods To Traditional Mark-Resight Methods For Estimating Abundance Of Mule Deer On Winter Ranges, Andi M. Stewart

All Graduate Theses and Dissertations, Spring 1920 to Summer 2023

Well-designed monitoring strategies are required to obtain accurate estimates of population abundance, which is important for evaluating conservation and management strategies. Obtaining abundance estimates using traditional survey methods, like aerial surveys, is not possible in all scenarios and can be expensive and risky. One survey method that has gained popularity in the last decade is fecal DNA-based capture-recapture (CMR). However, this method has not been evaluated on winter ranges or in snowy, winter conditions.

My first objective was to implement fecal DNA CMR to estimate abundance of mule deer in the Round Valley and Goodale winter survey areas in the …

Conservation Genetics Of A Declining Bumble Bee In Western North America; The Influence Of Geography, Dispersal Limitation, And Anthopogenic Activity, Ashley T. Rohde

All Graduate Theses and Dissertations, Spring 1920 to Summer 2023

Conservation biology addresses the problem of species loss by identifying species in need of protection. Conservation biology has subfields to address different aspects of biodiversity loss, including genetics and sociology. I used genetic approaches to assess the conservation status of western bumble bees, a bumble bee species of conservation concern.

The western bumble bee is a bumble bee species that ranges from Alaska to New Mexico and as far east as Wyoming and Colorado. This species is disappearing in some places. It may soon be listed as endangered in the United States and is already listed as endangered in parts …