Life Sciences Commons^™

Assessment Of Benthic Macrofauna Community Within Intertidal Mudflats - Hurds Cove, Lynnhaven River, Virginia, M. Lisa Kellogg, Jennifer C. Dreyer

Reports

A total of 30 samples were collected from eight locations in Hurds Cove, Lynnhaven River, VA. All samples were rinsed over a 500-μm mesh sieve and all material retained on the sieve was analyzed to determine benthic macrofaunal community identity, abundance and biomass. With the exception of one sample with relatively high biomass (50.68 g AFDW m-2) attributable to a single (Rangia cuneata), biomass across all locations was low, ranging from 0.16-0.67 g AFDW m-2. At five of the eight locations, all measurable biomass was contributed by polychaete worms. At the other three locations, polychaetes accounted for 45-57% of total …

Multidisciplinary Observing In The World Ocean's Oxygen Minimum Zone Regions: From Climate To Fish - The Voice Initiative, V Garcon, J Karstensen, A Palacz, Et Al, Kevin C. Weng

VIMS Articles

Multidisciplinary ocean observing activities provide critical ocean information to satisfy ever-changing socioeconomic needs and require coordinated implementation. The upper oxycline (transition between high and low oxygen waters) is fundamentally important for the ecosystem structure and can be a useful proxy for multiple observing objectives connected to eastern boundary systems (EBSs) that neighbor oxygen minimum zones (OMZs). The variability of the oxycline and its impact on the ecosystem (VOICE) initiative demonstrates how societal benefits drive the need for integration and optimization of biological, biogeochemical, and physical components of regional ocean observing related to EBS. In liaison with the Global Ocean Oxygen …

Analysing Tropical Elasmobranch Blood Samples In The Field: Blood Stability During Storage And Validation Of The Hemocue® Haemoglobin Analyser, Gail D. Schwieterman, Ian A. Bouyoucos, Kristy Potgieter, Colin A. Simpfendorfer, Richard Brill, Jody L. Rummer

VIMS Articles

Blood samples collected from wild-caught fishes can provide important information regarding the effects of capture (and thus post-release survival) as well as other stressors. Unfortunately, blood samples often cannot be analysed immediately upon sampling, and blood parameters (e.g. blood oxygen levels and acid–base parameters) are known to change with storage duration due to the metabolic activity of the red blood cells. We obtained blood samples from both untreated and stressed individuals of both blacktip reef shark (Carcharhinus melanopterus) and sicklefin lemon shark (Negaprion acutidens) to determine the effects of storage duration on blood pH, haematocrit and …

The Importance Of Antarctic Krill In Biogeochemical Cycles, El Cavan, A Belcher, Sl Hill, S Kawaguchi, S Mccormack, B Meyer, S Nicol, K Schmidt, Deborah K. Steinberg, Ga Tarling, Pw Boyd

VIMS Articles

Antarctic krill (Euphausia superba) are swarming, oceanic crustaceans, up to two inches long, and best known as prey for whales and penguins – but they have another important role. With their large size, high biomass and daily vertical migrations they transport and transform essential nutrients, stimulate primary productivity and influence the carbon sink. Antarctic krill are also fished by the Southern Ocean’s largest fishery. Yet how krill fishing impacts nutrient fertilisation and the carbon sink in the Southern Ocean is poorly understood. Our synthesis shows fishery management should consider the influential biogeochemical role of both adult and larval …

Temporal, Spatial, And Biological Variation Of Nematode Epidemiology In American Eels, Zt Warshafsky, Troy D. Tuckey, Wk Vogelbein, Rj Latour, Ar Wargo

VIMS Articles

This is the accepted manuscript version of the article.

American eels (Anguilla rostrata) are infected by the non-native parasitic nematode Anguillicoloides crassus, which can cause severe swim bladder damage. We investigated epidemiology of A. crassus to better understand its population-level effects on American eels. Nematode prevalence, abundance, and intensity and swim bladder damage were quantified in glass eels, elvers, and yellow eels from the lower Chesapeake Bay and related to season of capture, river system, and total length. Age-variant force-of-infection and disease-associated mortality were estimated using a three-state irreversible disease model, which assumes recovery is not possible. Results showed glass …

A Data Repository For Minimal Effects Of Oyster Aquaculture On Water Quality: Examples From Southern Chesapeake Bay, Jessica Turner, Grace M. Massey, M. Lisa Kellogg, Carl Friedrichs

Data

The objective of this study was to quantify the effects of oyster aquaculture on water quality, sediment quality, and hydrodynamics at select sites in southern Chesapeake Bay. To this end, information was gathered over the course of approximately one year from February 2017 to October 2017 at four operating commercial farms. Farms were sampled during spring, summer, and fall seasons during times of oyster filtration activity when temperatures were greater than 10^oC. Aquaculture sites differed in environmental setting, in terms of their exposure to waves and resulting sediment characteristics. Sites had mesohaline salinities (ranging from 15-22 psu) and …

James River Water Quality Model Refinement And Scenario Simulations, Jian Shen, Qubin Qin

Reports

This project was part of the Virginia Department of Environmental Quality’s (DEQ) study to evaluate the protectiveness of chlorophyll criteria and consider potential criteria revisions, along with implications for the James River portion of the Chesapeake Bay TMDL.

Impacts Of Sea Level Rise On Hypoxia In The Chesapeake Bay: A Model Intercomparison, Pierre St-Laurent, Marjorie A.M. Friedrichs, Ming Li, Wenfei Ni

Reports

Over recent years a number of studies have examined the effects of sea level rise (SLR) on hypoxia in Chesapeake Bay. However, variations in the methodology, the years considered, and the metrics reported made comparisons between these studies difficult. To clarify the effects of SLR on the Bay’s hypoxia, we present an intercomparison between four numerical models following a common methodology. The models share the riverine fluxes, baseline period (1991–1995), and consider the same three scenarios of SLR: an increase in sea level of 0.17m, 0.50m, and 1.00m (representative of years 2025, 2050 and 2100, respectively). SLR is the sole …

Scientific Considerations For Acidification Monitoring In The Us Mid-Atlantic Region, Ka Goldsmith, S Lau, Et Al, Eh Shadwick, Et Al

VIMS Articles

Coastal and ocean acidification has the potential to cause significant environmental and societal impacts. Monitoring carbonate chemistry parameters over spatial and temporal scales is challenging, especially with limited resources. A lack of monitoring data can lead to a limited understanding of real-world conditions. Without such data, robust experimental and model design is challenging, and the identification and understanding of episodic acidification events is nearly impossible. We present considerations for resource managers, academia, and industry professionals who are currently developing acidification monitoring programs in the Mid-Atlantic region. We highlight the following considerations for deliberation: 1) leverage existing infrastructure to include multiple …

Bacterial And Archaeal Specific-Predation In The North Atlantic Basin, Lm Seyler, S Tuorto, Lr Mcguinness, Dl Gong, Lj Kerkof

VIMS Articles

Stable isotope probing (SIP) was used to track prokaryotic and eukaryotic carbon uptake along a meridional transect (Long. 52°W) in the North Atlantic to assess if ¹³C-resource partitioning between bacteria and archaea and ¹³C-labeled eukaryotic predators could be detected. One-liter SIP microcosms were amended with ¹³C-acetate or ¹³C-urea and incubated for 48 h. Our data indicated archaea often outcompeted bacteria for ¹³C-urea while both archaea and bacteria could incorporate ¹³C-acetate. This ¹³C label could also be tracked into eukaryotic microbes. The largest number of ¹³C-labeled eukaryotic OTUs, and the greatest percentage of …

Oyster Reef Ecosystem Services: Macrofauna Utilization Of Restored Oyster Reefs - Harris Creek, Maryland, Usa, M. Lisa Kellogg, Jennifer C. Dreyer, Cate Turner, Manisha Pant, Paige G. Ross, Alan Birch, Sean Fate, Edward Smth, Kennedy Paynter

Reports

Oyster reefs provide habitat for a variety of macrofauna species. Our studies focused on the relationship between oyster tissue biomass density and reef-associated macrofauna biomass density. Studies were conducted in 2015-2017 and sites encompassed the majority of the area in which restoration activities were conducted with the Harris Creek Oyster Sanctuary in Maryland. Results presented in this report focus on: 1) interactions between oyster biomass density and season in determining macrofauna biomass, 2) responses of macrofauna to oyster biomass densities below “threshold” levels (0-14.9 g DW m-2) and between threshold and “target” levels (15-49.9 g DW m-2) defined in the …

Development Of Helical, Fish-Inspired Cross-Step Filter For Collecting Harmful Algae, Adam Schroeder, Lauren Marshall, Brian Trease, Anna Becker, S. Laurie Sanderson

Arts & Sciences Articles

A new filter was developed to collect harmful algae colonies by adapting the cross-step filtration structures and mechanisms discovered recently in filter-feeding fish. Extending beyond previously published models that closely emulated the basic morphology of the fish, the new cross-step filter's major innovations are helical slots, radial symmetry, and rotation as an active anti-clogging mechanism. These innovations enable the transport of concentrated particles to the downstream end of the filter. This advance was made possible by recognizing that biologically imposed constraints such as bilateral symmetry do not apply to human-made filters. The use of helical slots was developed in a …

Toward A Coordinated Global Observing System For Seagrasses And Marine Macroalgae, J. Emmett Duffy, L. Benedetti-Cecchi, Et Al, Robert J. Orth, Et Al

VIMS Articles

In coastal waters around the world, the dominant primary producers are benthic macrophytes, including seagrasses and macroalgae, that provide habitat structure and food for diverse and abundant biological communities and drive ecosystem processes. Seagrass meadows and macroalgal forests play key roles for coastal societies, contributing to fishery yields, storm protection, biogeochemical cycling and storage, and important cultural values. These socio-economically valuable services are threatened worldwide by human activities, with substantial areas of seagrass and macroalgal forests lost over the last half-century. Tracking the status and trends in marine macrophyte cover and quality is an emerging priority for ocean and coastal …

Mechanisms Involving Sensory Pathway Steps Inform Impacts Of Global Climate Change On Ecological Processes, Emily B. Rivest, Brittany Jellison, Gabriel Ng, Et Al

VIMS Articles

Human-caused environmental change will have significant non-lethal and indirect impacts on organisms due to altered sensory pathways, with consequences for ecological interactions. While a growing body of work addresses how global ocean change can impair the way organisms obtain and use information to direct their behavior, these efforts have typically focused on one step of the pathway (e.g., reception of a cue/signal), one sensory modality (e.g., visual), or one environmental factor (e.g., temperature). An integrated view of how aspects of environmental change will impact multiple sensory pathways and related ecological processes is needed to better anticipate broader consequences for marine …

The Application Of Oyster Reefs In Shoreline Protection: Are We Over-Engineering For An Ecosystem Engineer?, R. L. Morris, Donna M. Bilkovic, M. K. Boswell, Et Al

VIMS Articles

Oyster reef living shorelines have been proposed as an effective alternative to traditional coastal defence structures (e.g. bulkheads, breakwaters), with the benefit that they may keep pace with sea-level rise and provide co-benefits, such as habitat provision. However, there remains uncertainty about the effectiveness of shoreline protection provided by oyster reefs, which limits their broader application. We draw evidence from studies along the east and gulf coasts of the United States, where much research and implementation of oyster reef restoration has occurred, to better define the existing gaps in our understanding of the use of restored oyster reefs for shoreline …

Treading Water: Tools To Help Us Coastal Communities Plan For Sea Level Rise Impacts, E A. Smith, W Sweet, Molly Mitchell, R Domingues, C P. Weaver, M Baringer, G Goni, J Haines, Jon Derek Loftis, John D. Boon, David L. Malmquist

VIMS Articles

As communities grapple with rising seas and more frequent flooding events, they need improved projections of future rising and flooding over multiple time horizons, to assist in a multitude of planning efforts. There are currently a few different tools available that communities can use to plan, including the Sea Level Report Card and products generated by a United States. Federal interagency task force on sea level rise. These tools are a start, but it is recognized that they are not necessarily enough at present to provide communities with the type of information needed to support decisions that range from seasonal …

Oyster Reef Ecosystem Services: Finfish Utilization And Trophic Linkages Harris Creek, Maryland, Usa, M. Lisa Kellogg, Paige G. Ross, Manisha Pant, Jennifer C. Dreyer, Alan Birch, Sean Fate, Edward Smith

Reports

Oyster reefs provide habitat for finfish and their prey. Our project focused on determining the impacts of oyster reef restoration on finfish in the Harris Creek Oyster Sanctuary in the Maryland portion of Chesapeake Bay. As a preliminary step, we examined the utility of using trawls in the place of gillnets to sample finfish but found that trawl samples were also highly variable and that the diets of finfish caught in trawls tended to be different than those caught in gillnets. Based on these findings and the fact that gillnets can be set within reef habitats, all remaining sampling was …

Parasitic Dinoflagellate Hematodinium Perezi Prevalence In Larval And Juvenile Blue Crabs Callinectes Sapidus From Coastal Bays Of Virginia, Hj Small, Jp Huchin-Mian, Ks Reece, Km Pagenkopp Lohan, Mj Butler Iv, Jd Shields

VIMS Articles

The parasitic dinoflagellate Hematodinium perezi infects the American blue crab Callinectes sapidus and other decapods along the Eastern seaboard and Gulf of Mexico coast of the USA. Large juvenile and adult blue crabs experience high mortality during seasonal outbreaks of H. perezi, but less is known about its presence in the early life history stages of this host. We determined the prevalence of H. perezi in megalopae and early benthic juvenile crabs from multiple locations along the Virginia portion of the Delmarva Peninsula. The DNA of H. perezi was not detected in any megalopae collected from several locations within the …

Change Detection In A Marine Protected Area (Mpa) Over Three Decades On Bonaire, Dutch Caribbean, N. J. Relles, M. R. Patterson, D. O.B. Jones

VIMS Articles

The island of Bonaire is a long-established Marine Protected Area (MPA), the reefs of which were extensively mapped in the early 1980s. Satellite remote sensing techniques were used to construct reef maps for 2008-2009. Metrics describing the spatial structure of coral habitat at the landscape scale - including coral cover, fragmentation, patch size and connectivity between patches - were calculated and compared between these two time periods. Changes were evaluated in and out of the MPAs and in areas exposed and sheltered from storm damage. Overall, coral cover has declined during the past three decades, being replaced by sand, but …

Assessment Of Spray Polyurethane Foam Worker Exposure To Organophosphate Flame Retardants Through Measures In Air, Hand Wipes, And Urine, Cf Estill, J. Slone, Alexander Charles Mayer, Kaitlyn Phillips, John Lu, I-Chen Chen

VIMS Articles

Tris(1-chloro-2-propyl) phosphate (TCPP, also referenced as TCIPP), a flame retardant used in spray polyurethane foam insulation, increases cell toxicity and affects fetal development. Spray polyurethane foam workers have the potential to be exposed to TCPP during application. In this study, we determined exposure to TCPP and concentrations of the urinary biomarker bis(1-chloro-2-propyl) phosphate (BCPP) among 29 spray polyurethane foam workers over 2 work days. Work was conducted at residential or commercial facilities using both open-cell (low density) and closed-cell (high density) foam. Study participants provided two personal air samples (Day 1 and Day 2), two hand wipe samples (Pre-shift Day …

Quantifying Habitat Selection And Variability In Habitat Suitability For Juvenile White Sharks, Cf White, K Lyons, Sj Jorgensen, J O'Sullivan, C Winkler, Kevin C. Weng, Cg Lowe

VIMS Articles

While adult white sharks (Carcharodon carcharias) are apex predators with a circumglobal distribution, juvenile white sharks (JWS) feed primarily on bottom dwelling fishes and tend to be coastally associated. Despite the assumedly easier access to juveniles compared to large, migratory adults, limited information is available on the movements, environments, and distributions of individuals during this life stage. To quantify movement and understand their distribution in the southern California Bight, JWS were captured and fitted with dorsal fin-mounted satellite transmitters (SPOT tags; n = 18). Nine individuals crossed the U.S. border into Baja California, Mexico. Individuals used shallow habitats (134.96 +/- …

Virginia Game Fish Tagging Program Annual Report 2018, Susanna Musick, Lewis Gillingham

Reports

Through 2018, the Virginia Game Fish Tagging Program (VGFTP) has maintained a 23-year database of records for tagged and recaptured fish. The program is a cooperative project of the Virginia Saltwater Fishing Tournament (VSFT) under the Virginia Marine Resources Commission-(VMRC) and the Virginia Institute of Marine Science (VIMS) of the College of William and Mary (under the VIMS Marine Advisory Program).

A Data-Driven Modeling Approach For Simulating Algal Blooms In The Tidal Freshwater Of James River In Response To Riverine Nutrient Loading, Jian Shen, Qubin Qin, Ya Wang, Mac Sisson

VIMS Articles

Algal blooms often occur in the tidal freshwater (TF) of the James River estuary, a tributary of the Chesapeake Bay. The timing of algal blooms correlates highly to a summer low-flow period when residence time is long and nutrients are available. Because of complex interactions between physical transport and algal dynamics, it is challenging to predict interannual variations of bloom correctly using a complex eutrophication model without having ahigh-resolution model gridto resolve complexgeometryand anaccurate estimate of nutrientloading to drive the model. In this study, an approach using long-term observational data (from 1990 to 2013) and the Support vector machine (LS-SVM) …

Monitoring The Abundance Of American Shad And River Herring In Virginia's Rivers - 2018 Annual Report, Eric J. Hilton, Robert Latour, Patrick E. Mcgrath, Brian Watkins, Ashleigh Magee

Reports

This report describes the results of the twenty-first year of a continuing study to estimate the relative abundance and assess the status of American shad (Alosa sapidissima) stocks in Virginia by monitoring the spawning runs in the James, York and Rappahannock rivers in spring 2018, evaluating hatchery programs, and contributing to coast-wide assessments (ASMFC 2007). We also report on two fishery-independent monitoring programs using anchor gillnets in the Rappahannock River (year 1) and the Chickahominy River (year 4; a major tributary of the James River), to determine relative abundance and stock structure for the adult spawning run of river herring …

Advancing Marine Biogeochemical And Ecosystem Reanalyses And Forecasts As Tools For Monitoring And Managing Ecosystem Health, K Fennel, M Gehlen, P Brasseur, Cw Brown, C Ciavatta, G Cossarini, A Crise, Ca Edwards, D Ford, Marjorie A.M. Friedrichs, Et Al

VIMS Articles

Ocean ecosystems are subject to a multitude of stressors, including changes in ocean physics and biogeochemistry, and direct anthropogenic influences. Implementation of protective and adaptive measures for ocean ecosystems requires a combination of ocean observations with analysis and prediction tools. These can guide assessments of the current state of ocean ecosystems, elucidate ongoing trends and shifts, and anticipate impacts of climate change and management policies. Analysis and prediction tools are defined here as ocean circulation models that are coupled to biogeochemical or ecological models. The range of potential applications for these systems is broad, ranging from reanalyses for the assessment …

Estimating Relative Abundance Of Young-Of-The-Year American Eel, Anguilla Rostrata, In The Virginia Tributaries Of Chesapeake Bay, Spring 2018, Troy D. Tuckey, Mary C. Fabrizio

Reports

American Eel (Anguilla rostrata) is a valuable commercial species along the Atlantic coast of North America from New Brunswick to Florida. In the U.S., harvests have declined, with similar patterns occurring in the Canadian Maritime Provinces (Meister and Flagg 1997). An average of 62% of the annual landings of U.S. commercial harvest since 1993 have come from the Chesapeake Bay (personal communication from the National Marine Fisheries Service, Fisheries Statistics Division, 9 February 2015). In 2013, Virginia commercial landings were approximately 100,298 lbs; since mandatory reporting began in 1993, average annual landings in Virginia have been 193,200 lbs or 19% …

2018 Annual Awards, Virginia Institute Of Marine Science

Miscellaneous

The Annual Awards ceremony is an occasion in which new employees and volunteers are introduced, employee service is recognized and student and faculty awards are presented.

R/V Virginia Christening Ceremony, Virginia Institute Of Marine Science, William & Mary

Miscellaneous

Research vessel christening ceremony April 26, 2019. Program of events.

Campus Map Virginia Insttute Of Marine Science, William & Mary Gloucester Point August 2019, Virginia Institute Of Marine Science

Miscellaneous

No abstract provided.

Campus Map Virginia Institute Of Marine Science, William & Mary Gloucester Point January 2019, Virginia Institute Of Marine Science

Miscellaneous

No abstract provided.